Mrus022803.1
Basic Information
- Insect
- Machimus rusticus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_951509405.1
- Location
- OX608051.1:44633528-44637093[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.17 7.3e+03 -2.8 0.4 74 101 45 75 17 93 0.56 2 3 6.5e-112 2.8e-107 359.7 33.2 1 299 113 397 113 398 0.91 3 3 0.0028 1.2e+02 3.0 4.0 208 247 415 453 400 471 0.75
Sequence Information
- Coding Sequence
- ATGGCACaacaaaacgaaaatgttATAGTTCAAAATCTGGAAACAGATTTTACTGAAAGTGTTGCCGCATCCTTGAATAAAAGCGATGATGATGAGGAATTTGACTTTAGTGATAGCGATTTTAAAGATTGTGAAAGTGATAACGCGGTGGAAGATAAAACTGggtctgaaaattttatagaaataacaaataaaacaaatgagAGTAATGAGccttatgtaaaatataatagaaatatatcAAGAAATCAAAGTGTCGACAATGACGGAGATTGGCTCTATAAGGAAAATGAAGATGAATTCATTGTAGATTTTCTTGGAAAAGGAAATGACATTgCGGAGGCTAGATTGGCTGCACGGCGCCAGGCGCGCGCAGAAGCGCGTGAAATTCGAATGCGTGAATTAGAGCGCCAGCAAAAAGAGCAGGAACAAAATGCTGATCGCGTATTTGACATGCAAACTGTGGCTGGGCTCGACCCTTTGTCTAGATCCCGGCTAAATATGTCAGGAAATTCTGGAAGAGGTACTTCAATGTCCTCAAGACGAAGCAGCGAGGACTCTCTCGAAGAAGAAAGCAGAAGTTTACGTGATATTAGACATGAGCTTAAGgaTGTTGAAGAACGATTTAGAAAAGCAATGATAGCAAATGCACAATTAGACAATGAAAGAGCCTCACAGTCATACCAAATCCAATtgttaaaagataaattggaGGAAATGGAAGAATCATTTGCGCAACTCCAGAGAGAATATAAGGAGAAATGTCGTGATCATAAcgctttaaaaagaaattatgatAAATTAGATGAGGAATTAAAACTAGTTCGTGGGCAATTAGACGAAAGAGATAGTCTTATAGCTGAGCAGGGTTTAGTTATAGTTCTGGTAGAAAATCAAGATGGCTCAGATGCCAGGCGCGCTCTAGTCAGTATGGAGAACGCACAACTATTAGGTTCTGTTCAAGGCTCATTagACGTGCGgcttaaaaaattcactgaagaAAAGCAACAACTCCAAAAAGAAGTCCAAAGCCTTCATCAGCAATTAAGTGACATTAAATCCCAGGGTCGACGGGGCGGATCTCTAAACGGGCCTTTAGGAGCAGAAGATGACTATGAAGCTCAAAgaGAGGCTAATAAACTTATAGCtgattataaatataagcTTCAAAAGGCAGAACAAGAAATAGCTAGTTTGCAAGCTAGTTTAGCAAGGTCTGAGACACAAGTTATAAGATATAAAAGTACAGCAGAAGCAGCTGAAAAAGCGGAAGGTGAACTAAAAATAGAGCGAAGAAAACTTCAAAGAGAGaatcGTGAATTAATGGAACGTTTGGAAGAACTCGAGACTTCCAATAATCACCTACTGAAACGCTTAGATAAACTAAAGAATGCGAAGAGCGCACTGCTCAAAGACCTCTGA
- Protein Sequence
- MAQQNENVIVQNLETDFTESVAASLNKSDDDEEFDFSDSDFKDCESDNAVEDKTGSENFIEITNKTNESNEPYVKYNRNISRNQSVDNDGDWLYKENEDEFIVDFLGKGNDIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTVAGLDPLSRSRLNMSGNSGRGTSMSSRRSSEDSLEEESRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESFAQLQREYKEKCRDHNALKRNYDKLDEELKLVRGQLDERDSLIAEQGLVIVLVENQDGSDARRALVSMENAQLLGSVQGSLDVRLKKFTEEKQQLQKEVQSLHQQLSDIKSQGRRGGSLNGPLGAEDDYEAQREANKLIADYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEGELKIERRKLQRENRELMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00628366;
- 90% Identity
- iTF_00628366;
- 80% Identity
- -