Basic Information

Gene Symbol
Xbp1
Assembly
GCA_035043265.1
Location
JAWNND010000533.1:4197806-4198828[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-15 2.9e-12 46.6 12.3 2 60 84 142 84 143 0.94
2 2 7.1e-05 0.078 13.2 7.8 29 64 125 160 124 168 0.86

Sequence Information

Coding Sequence
ATGGCACCTGTCAACGGAGTGCTATTATCAAAGTGTGTGCCTATTGGATCGAACGTAAATTTAAACATGTTGCCCAAGCTTCGACCTGCGCCCATGACAGCAGTGCTGCTAAAGGGAAGCTCGTCGCCATCCAGTTCCGGCTATGCATCCTCATCAAACAGTGTGGCGGATGAGGATTCAATCACAATGGCTTCAAATTCATCTACGCCTATAAAGGCCAAGAAGCGCCGTTTGGATCATCTATCGTGGGAGGAGAAAGTACAGAGAAAGAAGCTAAAGAACCGTGTAGCGGCTCAAACCAGCCGTGACAGAAAGAAGGCACGTATGGAGGAGATGGAATATGAAATCAAGGAACTTACAGACAAAACAGAATTACTTCAAAACAAATGCGAGAGCTTGCAGAGCATTAATGAGTCTCTGCTggctaaaaatcaaaaactggACACAGAAGTGGAACTATTGCGTCAGGAACTCGCCGAAATGAAAGAGCTAGCTAAAACCTACAGCCAGAACAGCAGCCAAAGCAACAGCACCAGCGTCAATTCAAATGCTGAGGGCTGTGCGTCCACAACCACTGGATCTGCAGCATCCAATGCTGACCCTCTGCCGCAGGGTACACAAGTGGACACACAGTCGTCAGCGCTTGCCTTGGCGCCgaaaatgttgcaacagcagctgaagCAGAGCAACACAACAGCCTCTCTCTGGAGAATTGTGGCGCTTTGCCTTCTATACAAGACATGTTGCTCGTCGACGATGAAGAGTTCGACGCGCGACGACTTGAAGAGCTGGCCGAGAGCTTGCTCGCAGATATCACAGCAGACCTGGAAACAGGTAGTGGCACATGCGACCAAGTTGCTGCCAAAGATGCAGGCGAGTCAGAGCGACTGTCTGGATCAATGGTGGGGTCCACAGCAGAGCGCTTGGAATCCGGCGGAAATAGAGCTGATGGCATAA
Protein Sequence
MAPVNGVLLSKCVPIGSNVNLNMLPKLRPAPMTAVLLKGSSSPSSSGYASSSNSVADEDSITMASNSSTPIKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTDKTELLQNKCESLQSINESLLAKNQKLDTEVELLRQELAEMKELAKTYSQNSSQSNSTSVNSNAEGCASTTTGSAASNADPLPQGTQVDTQSSALALAPKMLQQQLKQSNTTASLWRIVALCLLYKTCCSSTMKSSTRDDLKSWPRACSQISQQTWKQVVAHATKLLPKMQASQSDCLDQWWGPQQSAWNPAEIELMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2