Basic Information

Gene Symbol
Xbp1_1
Assembly
GCA_035046045.1
Location
JAWNOI010000170.1:2138720-2139745[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.8 5.3e+03 -2.7 0.2 15 24 67 76 65 78 0.70
2 3 2.2e-15 1.7e-12 46.9 9.9 2 59 82 139 82 141 0.94
3 3 9.2e-05 0.072 12.9 8.5 25 65 119 159 118 166 0.85

Sequence Information

Coding Sequence
ATGGCGCCACCCGCGAACGGAGTGCTGCTATCGAAGTGTGTTCCCATCGGATCGAATCTAGGCATGAACCTGCTGCCCAAGCTGAGGCCTGCGCCCATAACGGCGGTGCTGCTGAAGGGTGCTTCCTCGCCCTCCAGTTCGGGCTACGCGTCCTCGTCCAACAGCGTCGTGGACGAGGAAACCATGGCCTCGCACACAGCTGCGCCCAAGGCCAAGAAGCGCCGTCTGGATCATCTCTCCTGGGAGGAGAAGGTGCAGCGGAAGAAGCTCAAGAACCGCGTGGCCGCACAGACCAGCCGCGACAGGAAGAAGGCGCGCATGGAGGAGATGGAGTTCGAGATCAAGGAGCTGACGGAGAAGACGGAGATACTGCAAAACAAATGCGACAGCTTGCAGAGCATCAACGAgtcgctgctggccaagaacCAGAAGCTGGACAGCGAGGCGGAGCTACTACGTCAGGAGCTCGCCGAGCTGAAGGAGCGCGTCAagcagaacagcagcagcaacaacaacaccagcagcaacaacaccagcagcgccagcgcaagCGCTGAGGGCTGTGTGTCCACAACCACTGGATCTGCAGCATCCAATGCTGACCCTCTGCAGCGGGGTACACAAGTGGACACACAGTCGTCAGCGCTCGCCCTGACGCCGCAcaagatgctgcagcagcagctgaagcagagcaacagcacagcctcgctctggagaATTGTtgcgctctgcctgctctaCAAGACATGCTGctcgtcgacgacgacgagttcGATGCGCGACGCCTCGAGGAGCTGGCCGAGAGCCTGCTCGCAGATATCACAGCAGACCTGGAGGCAGGCGCTGGCGCATGCCACGAAGCTCCTGCCCAAGCTGCAGGCGACGCAGAGCGACTGCCTGGACCAATGGTGGGGTCCGCAGCAGAGTGCCTGGAATCCGGCGGAAATAGAGCTGCTTGCCTAG
Protein Sequence
MAPPANGVLLSKCVPIGSNLGMNLLPKLRPAPITAVLLKGASSPSSSGYASSSNSVVDEETMASHTAAPKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEFEIKELTEKTEILQNKCDSLQSINESLLAKNQKLDSEAELLRQELAELKERVKQNSSSNNNTSSNNTSSASASAEGCVSTTTGSAASNADPLQRGTQVDTQSSALALTPHKMLQQQLKQSNSTASLWRIVALCLLYKTCCSSTTTSSMRDASRSWPRACSQISQQTWRQALAHATKLLPKLQATQSDCLDQWWGPQQSAWNPAEIELLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00608186;
90% Identity
-
80% Identity
-