Spal005813.1
Basic Information
- Insect
- Scaptomyza pallida
- Gene Symbol
- Xbp1
- Assembly
- GCA_018152965.1
- Location
- JAECXP010000063.1:2430539-2431597[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-13 1.1e-10 41.4 21.6 2 65 86 149 86 168 0.80 2 2 5.6 5.7e+03 -2.6 0.1 27 35 228 236 220 240 0.58
Sequence Information
- Coding Sequence
- ATGGCACCAGCTAACGGAGTGCTTTTAACCAAGATTGTGCCCATTGGCTCCAATATAAATTTGAATTTAAACACATTGCCCAAACTGCGACCAGCACCTGCGCTCTCCGCCACAGCTGTGCTGCTCAAGGGCGGCGGATCATCGCCATCCAGTTCGGGCTACGCATCCTCATCCAACAGCATCGCAGACGACGATTCAGTGACAATGGCAGCGCCAACAAAGGCCAAGAAGCGCCGCCTGGATCATCTGTCCTGGGAGGAAAAGGTGCAAAGAAAGAAGCTAAAGAATCGCGTTGCCGCACAGACGAGCCGGGATCGCAAGAAGGCGCGCATGGAGGAAATGGAAATGGAGATCAAGGAACTAACAGATAAAACAGAATTATTGCAAAACAAATGCGAAAGCTTGCAGAGCATCAATGAATCTCTGCTAGCGAAAAATCATAAACTTGATATGGAAATGGAACAACTACGACAGGAACTGGCCGAAATGAAGGAGCTTGCCAAGATGAACAGCAGTCTCAGCAACAACAACAGTAACAATAGCAATTGCTCTGGCGCCAATGCAGGCGCTGAGGGCTGTGCGTCCACATACACTGGATCTGCAGCATCCAATGCTGACCCTCTGCCGCAGGGTACACTAGTGGACACACAGTCGTCAGCGCGTGCCTTGACGACAACAAAACGATTGCTGCTGGAACAGCAGCTGAAGCAGAGCACAACGACAGCATCGCTCTGGAGAATTGTGGCGCTCTGCCTTCTATACAAGACATGTTGCTCGTCGACGACGATGAAGAGTTCGATGCGCGACGGCTTGAAGAGCTGGCCGAAAGCCTCCTTGCAGATATCGCAGCAGACCTGGAACAAAGCGCTGGCGCATGCCACGAAACTCCTGCCCAAGATGCAGGCCACACAGAGCGATTGTCTGGATCAATGGTGGGGTCCACAGCAGAGTGCATGGAATCCAGCGGGCATAGAATTGATGGCCTAA
- Protein Sequence
- MAPANGVLLTKIVPIGSNINLNLNTLPKLRPAPALSATAVLLKGGGSSPSSSGYASSSNSIADDDSVTMAAPTKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEMEIKELTDKTELLQNKCESLQSINESLLAKNHKLDMEMEQLRQELAEMKELAKMNSSLSNNNSNNSNCSGANAGAEGCASTYTGSAASNADPLPQGTLVDTQSSARALTTTKRLLLEQQLKQSTTTASLWRIVALCLLYKTCCSSTTMKSSMRDGLKSWPKASLQISQQTWNKALAHATKLLPKMQATQSDCLDQWWGPQQSAWNPAGIELMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00608186;
- 90% Identity
- iTF_01323132;
- 80% Identity
- -