Basic Information

Gene Symbol
XBP1
Assembly
GCA_004143845.1
Location
SCDZ01000071.1:30749-31774[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.1 1.3e+03 -0.4 0.0 9 25 66 82 61 84 0.83
2 3 2.5e-15 3.1e-12 46.5 11.8 2 60 87 145 87 146 0.94
3 3 6.9e-07 0.00085 19.5 5.5 25 64 124 163 123 164 0.93

Sequence Information

Coding Sequence
ATGGCACCAGTTAACGGAGTGCTATTATCCAAATATGTGGCAATCGGaagcaacaatttgaatttaagtgCATTGCCTAAGCTGCGACCCGCGCCCCTGTCAGCCACCGCGGTGCTGCTCAAGGGTGCGGCGTCGCCGTCCAGTTCGGGCTACGCGTCCTCGTCCAACAGTGTGGCCGACGAGGAGTCAACCACGATGGCTTCGAATTCGTCAGCGCCCACCAAGGCCAAGAAACGGCGCCTGGATCACTTGTCCTGGGAGGAGAAAGTACAGCGAAAGAAACTAAAGAATCGTGTGGCCGCACAAACCAGTCGCGACCGTAAGAAGGCGCGCATGGAGGAAATGGAATATGAAATCAAGGAACTGACCGACAAAACGGAAATACTGCAAAACAAATGCGAGAGCTTGCAGAGCATTAATGAATCTCTGCTGGCCAAGAATCAGAAGCTCGACTCGGAAATGGAACAACTGCGCCAGGAACTGGCCGAAATGAAGCAGCttgccaaacaacaaaaacacagcaacagCGCTGGCGTCAATGCAAACGCTGAGGGCTGTGTGTCCACAACCACTGGATCTGCAGCATCCAATGCTGACCCTCTGCCGCAGGGTACACAAGTGGACACACAGTCGTCAGCGCGTGCATTGACATCGaagctgttgcagcagcagctgctgaagcAGAGCAACACAACAGCCTCACTTTGGAGAATTGTGGCGCTCTGCCTTCTTTACAAGACATGTTGCTCGTCGACGACGAAGAGTTCGATGCGCGCCGACTCGAAGAGCTGGCCGAAAGCCTGCTCGCAGATATCACAGCAGACCTGGAGACAGGCGCTGGCGCATGCGACCAAGCTGCTGCCAAAGATGCAGGCGAACCAGAGCGATTGCCTGGATCAGTGGTGGGGTCCGCAGCAGAGTGCATGGAATCCGACGGGAATAGAGCTGATGGCTTAG
Protein Sequence
MAPVNGVLLSKYVAIGSNNLNLSALPKLRPAPLSATAVLLKGAASPSSSGYASSSNSVADEESTTMASNSSAPTKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTDKTEILQNKCESLQSINESLLAKNQKLDSEMEQLRQELAEMKQLAKQQKHSNSAGVNANAEGCVSTTTGSAASNADPLPQGTQVDTQSSARALTSKLLQQQLLKQSNTTASLWRIVALCLLYKTCCSSTTKSSMRADSKSWPKACSQISQQTWRQALAHATKLLPKMQANQSDCLDQWWGPQQSAWNPTGIELMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00608186;
90% Identity
iTF_00541525;
80% Identity
-