Dlim023285.1
Basic Information
- Insect
- Drosophila limbata
- Gene Symbol
- XBP1
- Assembly
- GCA_963924055.1
- Location
- OZ001355.1:9539789-9540833[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.7 6.4e+03 -2.1 0.0 6 24 65 83 62 85 0.72 2 3 3.2e-15 5.7e-12 46.1 12.0 2 58 89 145 89 147 0.94 3 3 0.00025 0.43 11.2 4.8 30 62 138 170 136 173 0.76
Sequence Information
- Coding Sequence
- ATGGCACCTGCGAACGGAGTGCTATTATCAAAGTGTGTGCCAATTGGCTcgagtttaaataatttgaatacgaatacgagtatGTTGCCCAAGCTGAGACCCGCGCCCATCACAGCAGTGCTGATCAAGGGCAGCTCGTCGCCGTCCAGCTCTGGCTATGCATCCTCATCCAACAGTGTGGCGGATGAGGATTTAGCCACAATGGCCTCCAATGCCTCGGCGCCCATCAAGGCCAAGAAGCGACGGCTGGATCATCTGTCCTGGGAGGAGAAAGTACAGAGAAAGAAACTAAAGAATCGTGTTGCGGCACAAACCAGTCGCGACCGGAAGAAGGCACGCATGGAGGAAATGGAATATGAAATCAAGGAGCTAACTGAGAAAACAGAGATACTTCAAAACAAATGCGAGAGCTTGCAGAGCATTAATGAGTCTCTGCTGGCCAAAAATCAGAAACTGGACACGGAAGTGGAGTTATTGCGTCAGGAACTCACCGAAATGAAAGAACTAGCTAAAAAGTACAGTCAAAGCCAAGGCcaaagcaactgcaacagcggAAGCGTGAATGCAAACGCTGAGGGCTGTGCGTCCACACTCACTGGATCTGCAGCATCCAATGCTGACCCTCTGCAGCAGGGTACACAAGTGGACACACAGTCGTCAGCGCTTGCCTTGATGCCGAAAAtgttgcaacagcagctgaagCAGAGCAACACAACAGCCTCGCTCTGGAGAATTGTGGCGCTATGCCTTCTATACAAGACATGCTGCTCGTCGACGATGAAGAGTTCGACGCGCGACGACTTGAAGAGCTGGCCGAGAGCCTGCTCGCAGATATCACAGCAGACCTGGAAACGGGCAGTGGCACATGCGACCAAGCTGCTGCCAAAGATGCAGGCGAGCCAGAGCGATTGTCTGGATCAGTGGTGGGGACCACAGCAAAGTGCTTGGAATCCGGCGGAAATAGAAATGATGGCTTAA
- Protein Sequence
- MAPANGVLLSKCVPIGSSLNNLNTNTSMLPKLRPAPITAVLIKGSSSPSSSGYASSSNSVADEDLATMASNASAPIKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTEKTEILQNKCESLQSINESLLAKNQKLDTEVELLRQELTEMKELAKKYSQSQGQSNCNSGSVNANAEGCASTLTGSAASNADPLQQGTQVDTQSSALALMPKMLQQQLKQSNTTASLWRIVALCLLYKTCCSSTMKSSTRDDLKSWPRACSQISQQTWKRAVAHATKLLPKMQASQSDCLDQWWGPQQSAWNPAEIEMMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00608186;
- 90% Identity
- iTF_00528547;
- 80% Identity
- -