Sgra002241.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- Xbp1
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000132.1:14523460-14524515[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5e-14 2.1e-11 43.4 11.7 2 58 86 142 86 144 0.95 2 3 3.7e-06 0.0031 17.2 8.1 25 64 123 162 122 169 0.94 3 3 4.3 3.7e+03 -2.2 0.3 24 35 222 233 216 237 0.50
Sequence Information
- Coding Sequence
- ATGGCACCAGTTAACGGAGTGCTTTTAACCAAGATTGTGCCCATTGGCTCTAATATAAATACCAATTTAAACACATTGCCCAAACTGCGACCAGCGCCGCTGCTTTCCACCGCAGCTGTGCTGCTTAAGGGCGGCGGATCATCGCCATCCAGTTCGGGCTACGCATCTTCATCCAACAGCATCGCAGACGACGATTCGGTGACAATGGCAGCGCCAGCGAAGGCCAAGAAGCGTCGCCTGGATCATCTGTCCTGGGAGGAAAAGGTGCAGAGAAAGAAGCTAAAGAATCGCGTTGCCGCACAGACGAGCCGGGATCGCAAGAAGGCGCGCATGGAGGAGATGGACATAGAAATCAGAGAACTTACTGATAAAACGGAATTACTGCAAAACAAATGCGAAAGCTTGCAGAGCATTAATGAAGCTCTGTTGGCCAAGAATCAGAAACTGGATTCAGAAATGGAAGAACTACGACAGGAACTGGCCGAAATGAAAGAGCTTGCCAAGAAGAACACTCTCAGCAACAGCAGCAACAACCATAGCAATAGCTCTGGCGTCAATATAGGCGCTGAGGGCTGTGCGTCCACATACACTGGATCTGCAGCATCCAATGCTGACCCTCTGCCGCAGGGTACACTAGTGGACACACAGTCGTCAGCGCGTCTATTGACAACAAAGCGATTGCTGGAACAACAGCTGAAGCAGAGCACAACGACAGCATCGCTCTGGAGAATTGTGGCAATCTGCCTTCTATACAAGACATGCTGCTCGTCGACGACGAAGAGTTCGATGCGCGGCGGCTTGAAGAGCTGGCCGAAAGCCTGCTCGCAGATATCGCCGCAGACCTGGAAACAAGCGCTGGCGCATGCCACCAAACTGCTACCCAAGATGCAGGCCAGTCAGAGCGATTGTCTGGACCAATGGTGGGGACCGCAGCAGAGTGCATGGAATCCGGCGGGCATAGAGCTGATGGCATAA
- Protein Sequence
- MAPVNGVLLTKIVPIGSNINTNLNTLPKLRPAPLLSTAAVLLKGGGSSPSSSGYASSSNSIADDDSVTMAAPAKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMDIEIRELTDKTELLQNKCESLQSINEALLAKNQKLDSEMEELRQELAEMKELAKKNTLSNSSNNHSNSSGVNIGAEGCASTYTGSAASNADPLPQGTLVDTQSSARLLTTKRLLEQQLKQSTTTASLWRIVAICLLYKTCCSSTTKSSMRGGLKSWPKACSQISPQTWKQALAHATKLLPKMQASQSDCLDQWWGPQQSAWNPAGIELMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00608186;
- 90% Identity
- iTF_01323132;
- 80% Identity
- -