Basic Information

Gene Symbol
Xbp1
Assembly
GCA_037043685.1
Location
JBAMBA010000208.1:5672994-5674358[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.2e-15 2.1e-12 46.8 12.9 2 58 60 116 60 118 0.95
2 3 2.4e-06 0.0023 17.8 7.4 25 64 97 136 96 137 0.94
3 3 8.3 7.9e+03 -3.1 0.2 28 36 198 206 191 209 0.54

Sequence Information

Coding Sequence
atggcACCCTCGAACGGAGTGCTTATTTCCGCCACAGCTGTGCTGCTCAAGCGCGGAGCATCATCGCCGTCCAGTTCGGGCTACGCATCCTCTACCAATAGCAACGCGGACGAAGATTCAGTCACAATGGCAACGCCCACAAAGGCCAAGAAGCGTCGCCTCGACCATCTGTCCTGGGAGGAGAAGGTGCAGAGAAAAAAGCTAAAGAATCGCGTTGCCGCCCAGACGAGCCGGGATCGGAAAAAGGCGCGCATGGAGGAAATGGAATATGAGATCAAGGAACTCACTGACAAAACGGAAttattgcaaaacaaatgcgaGAGCTTGCAGAACATCAATGAATCCCTGCTGGCCAAAAATCAGAAGCTAGACACAGAAATGGAGCAACTGCGCCAGGAACTCGCCGAAATGAAAGAGCTTGCCAAGAAAAACAgtctcagcaacaacaacagtagcaaccgCTCTGGCGTCAATGCAGACGCTGAGGGCTGTGCGTCCACATACACTGGATCTGCAGCATCCAATGCTGACCCTCTGCCGCAGGGTACACTAGTGGACACACAGTCGTCAGCGCGTGCATTAGCGCTGAAGCgattgctgcaacagcagctgaagcagacaacaacgacagcatcGCTCTGGAGAATTGTGGCACTCTGCCTTCTATACAAGACATGCTGCTCGTCGACGATGAAGAGTTCGATGCGCGACGACTCGAAGAGCTGGCCGAAAGCCTACTCGCAGATATCACAGCAGACCTGGAGACAGGCCATGGCCCATGCCTCCAAACTGCTGCCCAAGATGCAGGCCACTCAGAGCGATTGTCTGGATCAGTGGTGGGGTCCCCAGCAGAGTGCTTGGAATCCAACGGGCATAGAACTGATGGCCTAA
Protein Sequence
MAPSNGVLISATAVLLKRGASSPSSSGYASSTNSNADEDSVTMATPTKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTDKTELLQNKCESLQNINESLLAKNQKLDTEMEQLRQELAEMKELAKKNSLSNNNSSNRSGVNADAEGCASTYTGSAASNADPLPQGTLVDTQSSARALALKRLLQQQLKQTTTTASLWRIVALCLLYKTCCSSTMKSSMRDDSKSWPKAYSQISQQTWRQAMAHASKLLPKMQATQSDCLDQWWGPQQSAWNPTGIELMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00608186;
90% Identity
iTF_00564401;
80% Identity
-