Dpse008750.1
Basic Information
- Insect
- Drosophila pseudoananassae
- Gene Symbol
- -
- Assembly
- GCA_018153035.1
- Location
- JAECXR010000039.1:856175-861856[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.11 7.8 7.0 0.4 1 23 1289 1312 1289 1312 0.94 2 13 6.5 4.6e+02 1.4 0.2 1 23 1466 1488 1466 1488 0.91 3 13 0.00014 0.01 16.1 2.7 2 23 1491 1512 1491 1512 0.97 4 13 5.6e-05 0.0039 17.4 0.2 3 23 1520 1540 1518 1540 0.98 5 13 4.6e-07 3.3e-05 23.9 4.1 2 23 1547 1568 1546 1568 0.97 6 13 4.4 3.1e+02 2.0 0.4 5 23 1581 1599 1579 1599 0.96 7 13 1.1 77 3.9 5.4 3 23 1606 1627 1604 1627 0.93 8 13 0.028 2 8.9 0.2 2 23 1638 1658 1637 1658 0.96 9 13 1.4e-05 0.001 19.2 0.6 1 19 1664 1682 1664 1686 0.95 10 13 2.8e-05 0.002 18.3 0.4 1 23 1694 1716 1694 1716 0.98 11 13 8.3e-05 0.0059 16.8 7.6 1 23 1722 1744 1722 1745 0.96 12 13 0.00037 0.027 14.8 6.6 1 23 1750 1772 1750 1772 0.98 13 13 0.0021 0.15 12.4 6.1 1 23 1778 1800 1778 1801 0.96
Sequence Information
- Coding Sequence
- ATGGTCGACAACAGTGTCCAGTGCCCCGTGTGCACCTTGTACCTGCATGCGGGCATGAATCTCTCCGATCACTTGGAGACTCACCCCAAGGAGCAGGTGATCAAGGCACTGGTGCAAATGACGATCGTAGGACCTGGATCTGGGAGCGGCGGCAGTGCCCTGGCGGCCGCAATGCTGGCAGGAGCTGGAGGCGGTGGAGGATCAGGTGGTGGTGGTGCAGCGAGTAGTGTTGACACCATCGCAGTAGATGACAAAACAGCTATTGCGCCTTTGAATGCCGAAGTAAAACCAGTTGTGACACCCAAATCCATATCAGCTGGAACGCCAGCGGGGCAGACACAGACGCCACCGCCGCCGCTCTCCTCAACTCTACCAACGCCCGCCACCACCTCTACCTCCGCCGCAAACAGCTCCAAATCCCCAAATAGCAACAAACTGAGCAATCCACCGATAAAAGCACTGAAATGCGCACCGCCCCCGACTGAGGCGCGAGCCAACACATCCGCACATCCCACCACAAGCAGCATGTCCAGTAGTCTGTACCAGCCAACTCTGGTTACCCCGGATTACCGCTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCGTGGCGGCAATGCTCCGACAGCCACCCTGGTGATTCCCCAAGTGCCCCAGCAGCACTTTCTCGCCAACCCCCAGCAACAGGCACACTTTTCCCATCAGCCGTCAACGCAACATCAGCCTCCACAGCAGCAGCAACAGCAGCCGGCCCTGAAGTACACCTACGCCAATGCTCTGCCCCCACCACCGCCGCTGCAGCTCTTCACGCAGCAGCAGGCCCTGCCGGCACCTGCAACCCAAACCAATTCGCCGCCACACGTGAAACCTCCGCCCGCCTATGGAGCCGCTATCAGTCAAATACGATCTCAGCACAACCAAAACAAACAGCAGCCTCAGCACCAACAGCTTCAGCCGCAACCCCCACACGTAACCGTGCACCACAATCACAACCTAACCCTGACACCACCGACAGCAGCCGCGGCATCATCCGTAGGACCTGCAGCTGGCAAGCAGCTTGTGTCTAGCAAAGGTCATGCGGAAGTTTTCCTGAATCCCCCACCACCGCCGTCGCAAGCACAGATCCAGAATCTGGGCCATCAGCAGAATCCAAACATAAACACGCATGCTAACCCCCAGCTGATGGGAACAGCGCCCTCCGGCAGATTACATCCGCAGCATCAGCCCCTCGGCTTGCAGGCCTATGCCTCTGGCTCAGGAGCCAGCAGCAGCTGCAGCTCCACGCTCACGCTGTCGGTTAATGCATCGAGCTCCACATCGGCTAGCATTCGCGGCCATCGTCAGACCAACTCGCCCTTCGGGGCATTGCTTAATGCTGCGGCGGCTGTTGCCTGCCCTTCGCCTGCCTCGTCCACGGCATCCTCGTCAGTGCTGCGCTACGCAGAGTCGCCGGTGGCCCACTACTTGGAACGCGAGAACGGAGACTTCATTGTCCAAGAGACTCCCAAGCACATTGTGGAGTGCGTTGAGAAGGAAGATGGCGAGTTCTCGGTGATTGAGCGCATATACCAGTCTCCGCCGAGTGTCCTGCATATCCACGATGAGGACGAGGAGGAGGAGGACGCTGAGGACGTCCACGAGGCGCCGCTGGAGGACGATGACGGGGATGATGAGCGCGAGGAGAACAGTCGTAGTCGCACCAAGGCAACCAAGAAGTCCCGGAAGACAAAGTCGAAGCGAAACTCCAAGCGCCTGTCGGACGAGGAGGAGTTCATGAGCATCAGCAGTGGCTGCGAAAGCGAGCCCGAGCGGGAGCGGAAAAAGGATACCCAGACTGCGAGCTCTACAACGTCTTCCCTCCCACCCTTAAGCACGGCGCCCTCAACAAGTAGGGCGGCTGCAACGGCCACATCGCCACCCAGTACAGCGGAGAATCATTCCAGTTCTGCTTCGAATTCCATATCCGCCAGCACCACCACCAAATCCAAGAAGAACCGGATTACCGTGCTCAGCGACGTTCCGCTCAACATGAACGAGTACCTCGATCTAATGGGAAACATTGTGGCCTCCAGCCGCATTGGGGCGGCCCGTCCCTTTGCCGCAGTGGCTCCGATTCCGTTGGTTAAGGTGGAAAAGGAGGAGCCGCTGGACGAATACGACAATGAAGCTGAGCAGCAGCAGCATCTGGAGCAGAAGCCCAGCCTGGAGCACGCCACCACTAGCGTAATTCGAATGGCCACCACATCGGTGGCGGCCACATCCGTTTCCGCCGAGGACCTAACGCAGCCGCCACCCATGAAAGTGGAGGTAGATCCCAACACCAAGCTCCTGCCGCAGCGCTTCTCCACGCCCGCCCAGCAACTTCGGGGGCCCAAGAAATTAGTCATTAAACCAAAGGCGACGGCGACGGCAACGGCGACAGCTACGGCGACGAAAAAGACTGACACCCCATCTTCCTCCAGCAGCAGCAACAGCAGTAGCAGCAGCGGCCACAACCCAACCATATCAAAGGACTTGGTGCAAGTAAAGAGTGAAAGCCTAGAGGCTCCGGCGGGCAGTAGCATTCTGGAGAAGCACCTGACCACCAACAGCGGCCGCAAGCTGCTTCATCATTCGGCGGCGAATGACGACGATGCCCGCGTCTTGCTGGAGTTCGCCAACTCCAAGCAGCCACCTCCTCTGGCTGCCGCTAGCACCACTTTTGTGGTGAACGCCAATACTGGATTCCCCTCGGCGGGATCCGTTTTCGCCAGCACCTCCAAATCAGCAGCTCTAAGCAAACCAGAAGACGAGTACATTCTTCCAGACAACAACAACCTAGATGTGGATGAGATTGTGATATCCTCGTCGTCTTCCTACGCTTCCTCGGCGGCGCAGATGCAGGCCGCGCTCCAACCGCCGGACTTCAACTTCCTGTACCACCAGCAGACCACCAGCACTACCACAGTCGCCACCGGTGCATACTTCAATTCCTTCTCCAAACAGCAGAATCTCCAACAGCATGGAGCGAGCGACGCCACCAATGCCGCCACTCTGGCCTCATCTTCGAGCAATTCCATGGACCACGACTCGATGAACGCCACATTCCGCGTGGCCAAGACTCAATCACAGTCCTGGTATCAGCAGGACCACGACCAGGATGCACATAATCAAGGTGGCGTGGGAGCCGGATCTGGTACAGCTTCTGGCAATCAGGGCCACGATGTGGTGGCCCAGCCGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGATGCCAAATATCTGGATCTGGACGCCTGCAAGCGGGAGCAGCTGAGCAGCAGCAACTTGCCCTCGGCCTCCGCCTCCACTTCGACCACATCGTCATCATTCGCTGGAGCTGGCACGGAAAGCAGCTTGGTGGGTGGCTTGAACATTCGGACAGATGAGAAGATGCCCGCCAAGGGTGAAATCTCGGAACAGGAAAGCAACTGCGACGTTGAAAACTCGTGGAGTGAATCGGTATACGGAGATATTTCACAGAGGTACTTCAGAAATCAGTTTTCCGGAGGATACAATCCAGAATGGCGGCAGGACTACTTTCCCACACATGACCTCAGCGGTCAGCCACGAGAGCAAAAGCATTTCGACTTCAATGCACTTGATGACGAGGCCTCATCCAGCTCTAGGAAGAGCGATCTGTTGGACATTGACCCCACGGCGGGCACCACCTCCTCCATTTGCACTTCCACGTCTTCGGCTTTGCTGGCTGGTCCACCCATAGCCTCGACTTCGCGGGCTGCTGCCGAGGCGGAGGCGGCTGCCATGGCCATCGCCCAAAGGAAACAGCATCGGCGCAAGCTTTACAAATGCCCCCACTGTGCGTCCATCTTCGAGAAACTAAAGGATCGGAATGCGCACATGATCGGAGAGCATAACTATGTTCGTCAGAACCGTCGGCTCATCTGCACCCAACCGCAGGTGGCGGGTTCCGAGATGCTCCCACCCCAGCAGCAAACAATGCTCCTACCCCCGGCCGAGGGGACTGCCCTTCAAGAGGACTCCAAAGACGGCATTGTGAAGATCAAGCAGGAACAATGCCAAGATAAGACGGATGTGGAGCAAATGCACCAAAACGCCGAACTGCTGACAGACGTCAAGGACTCGGAACTGCTGGGAATCGGGGATGCTGATGGAGAGGAGGATGGCGAGGGGGATTTCAAGCCGCCCAGTCAACTGGATGAAAAGATCGTACTACCACCGCTGGCCATGACTACTCCGGCTGCCAAGCTAGCAGCGCTCTATCGGATGCTCATCGCTTACAATGAGTCCAAGCTGGGCCAGGAGCGGAACAACCTCAACGAGCTGGAGCAGAAGGCCATGGAGAAGTCAATCTTCCTGTGCTATGTCTGCCGCACCGACTTTCCGTCTGTGAAGCTGTACGATGCCCATCTCACCGAGCACCCGGCCGAGTGCTTCACCTGCGGCAAGAAGTTCTACCGCTGGAAGAACTTTTCACTCCATCTCAAGCGCCATCTCGGGTGGAAGGAGTTCGGCTGCTACGTCTGCGACAAGAAATTTGTCGTTCGCAGTGCTCTGGTCGAGCACATGCGGATGCATACGGGCCAAACGCCTCTCAAGTGCAAGATATGCGGCAAGAAGTTTAAACGCTACTCGAATCTAACACAGCACCGGAAAAGGCACACCAAGATGATACTCCGCAAGAAGGAGTACGTGTGCCACTGCGGCGAGGTGCTGCCCTCGAAGGCACGCTTCCTGTGGCACAAGGAAACCCACGATCTGAAGCCAAAGTGCTGCCCCTATTGCTGCGATCGATTCGTGCATGCCAATTCGCTGCGGCGCCACATTCGACTGGCGCACTCGGAAAAATTCGATTACTCCGAGCCGATAGAGTGCCCGATGTGCAAGCAGACCTTCGCCAAAACCTCGATCAAGGCCCACATGGCGACGCATTCGACGGATCCCCAGTACGACTGTACCATCTGCAACAAGAGCTTCTCCACCAAGTGGAACCTCAAGATCCACTCGTGGGTACATGCCAACCGAACGGCCAAGCCTTTCAAGTGCGAGTACTGCCCGAAGGCGTTTGTGCGCGAGCTGGACTTCAAGAACCACATCAACGCGCACAAGCAGATCAAGCCGTACACGTGCGAGTACTGCGGCTGTAAGTTCATCCGCAAGTACAACTACATGCGGCATCGGCGCGAGCACCACGGAACCAAGAAGTTCACATGCGACCAGTGCGACAAGACCTTCCACCGGCACTACTATCTCGTCGAGCACCGGCGCATGCACACCGGCGAGCGACCCTTCACCTGCACCATCTGTGGCAAGAGCTCCACCACCAAGACCAACCACAACAAGCATCTGAAGATCCATCACTCGCGCGACCCCTTTACTGTCGAGGTTTAA
- Protein Sequence
- MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGPGSGSGGSALAAAMLAGAGGGGGSGGGGAASSVDTIAVDDKTAIAPLNAEVKPVVTPKSISAGTPAGQTQTPPPPLSSTLPTPATTSTSAANSSKSPNSNKLSNPPIKALKCAPPPTEARANTSAHPTTSSMSSSLYQPTLVTPDYRFXXXXXXXXXXXXXXGRGGNAPTATLVIPQVPQQHFLANPQQQAHFSHQPSTQHQPPQQQQQQPALKYTYANALPPPPPLQLFTQQQALPAPATQTNSPPHVKPPPAYGAAISQIRSQHNQNKQQPQHQQLQPQPPHVTVHHNHNLTLTPPTAAAASSVGPAAGKQLVSSKGHAEVFLNPPPPPSQAQIQNLGHQQNPNINTHANPQLMGTAPSGRLHPQHQPLGLQAYASGSGASSSCSSTLTLSVNASSSTSASIRGHRQTNSPFGALLNAAAAVACPSPASSTASSSVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDEDEEEEDAEDVHEAPLEDDDGDDEREENSRSRTKATKKSRKTKSKRNSKRLSDEEEFMSISSGCESEPERERKKDTQTASSTTSSLPPLSTAPSTSRAAATATSPPSTAENHSSSASNSISASTTTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDEYDNEAEQQQHLEQKPSLEHATTSVIRMATTSVAATSVSAEDLTQPPPMKVEVDPNTKLLPQRFSTPAQQLRGPKKLVIKPKATATATATATATKKTDTPSSSSSSNSSSSSGHNPTISKDLVQVKSESLEAPAGSSILEKHLTTNSGRKLLHHSAANDDDARVLLEFANSKQPPPLAAASTTFVVNANTGFPSAGSVFASTSKSAALSKPEDEYILPDNNNLDVDEIVISSSSSYASSAAQMQAALQPPDFNFLYHQQTTSTTTVATGAYFNSFSKQQNLQQHGASDATNAATLASSSSNSMDHDSMNATFRVAKTQSQSWYQQDHDQDAHNQGGVGAGSGTASGNQGHDVVAQPTXXXXXXXXXXXXXXXXXXDAKYLDLDACKREQLSSSNLPSASASTSTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDVENSWSESVYGDISQRYFRNQFSGGYNPEWRQDYFPTHDLSGQPREQKHFDFNALDDEASSSSRKSDLLDIDPTAGTTSSICTSTSSALLAGPPIASTSRAAAEAEAAAMAIAQRKQHRRKLYKCPHCASIFEKLKDRNAHMIGEHNYVRQNRRLICTQPQVAGSEMLPPQQQTMLLPPAEGTALQEDSKDGIVKIKQEQCQDKTDVEQMHQNAELLTDVKDSELLGIGDADGEEDGEGDFKPPSQLDEKIVLPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLNELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMILRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSEKFDYSEPIECPMCKQTFAKTSIKAHMATHSTDPQYDCTICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKTFHRHYYLVEHRRMHTGERPFTCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00539134; iTF_00615074; iTF_00615722; iTF_00550419; iTF_00477505; iTF_00476099; iTF_00481711; iTF_00566261; iTF_00488188; iTF_00504154; iTF_00546134;
- 90% Identity
- iTF_00477505; iTF_00481711; iTF_00550419; iTF_00566261; iTF_00488188; iTF_00539134;
- 80% Identity
- -