Dano013866.1
Basic Information
- Insect
- Drosophila anomalata
- Gene Symbol
- -
- Assembly
- GCA_035046425.1
- Location
- JAWNNY010001857.1:177566-183312[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.12 10 7.0 0.4 1 23 1306 1329 1306 1329 0.94 2 13 7.1 6e+02 1.4 0.2 1 23 1483 1505 1483 1505 0.91 3 13 0.00016 0.013 16.0 2.7 2 23 1508 1529 1508 1529 0.97 4 13 6.1e-05 0.0052 17.4 0.2 3 23 1537 1557 1535 1557 0.98 5 13 5.1e-07 4.3e-05 23.9 4.1 2 23 1564 1585 1563 1585 0.97 6 13 4.8 4.1e+02 1.9 0.4 5 23 1598 1616 1596 1616 0.96 7 13 1.2 1e+02 3.8 5.4 3 23 1623 1644 1621 1644 0.93 8 13 0.03 2.6 8.9 0.2 2 23 1655 1675 1654 1675 0.96 9 13 1.6e-05 0.0014 19.2 0.6 1 19 1681 1699 1681 1703 0.95 10 13 3.1e-05 0.0026 18.3 0.4 1 23 1711 1733 1711 1733 0.98 11 13 9.1e-05 0.0078 16.8 7.6 1 23 1739 1761 1739 1762 0.96 12 13 0.00041 0.035 14.7 6.6 1 23 1767 1789 1767 1789 0.98 13 13 0.0023 0.2 12.4 6.1 1 23 1795 1817 1795 1818 0.96
Sequence Information
- Coding Sequence
- ATGGTCGACAACAGCGTCCAGTGCCCCGTGTGCACCTTGTACCTGCACGCGGGCATGAATCTCTCCGATCACTTGGAGACTCATCCCAAAGAGCAGGTGATCAAGGCACTGGTGCAAATGACGATCGTTGGAAGTGGATCTGGGAGCGGCGGCAGTGCCCTGGCGGCCGCTATGCTGGCAGGAGCTGGGGGCGGTGGAGGATCAGGTGGTGGTGCAGCGAATGGTGTTGAAACCATTGTAATAGATGACAAAACAGCTATTACGCCTCTAAATGTCGAAGTGAAACCAGTTGTGACAGCCAAATCCATATCAGCTGGAACGGCACCAGCGGTACAGACGCCGCCGGCGCCCCCGCCACCGCTCTCCTCAACTCTATCAACgcccgccaccgccaccactaCCTCCGCCGCAAACAGCTCCAAGTCCCCAAATAGCAACAAACTGAGCAATCCACCGATAAAAGCACTGAAATGCGCACCGCCCCCGACTGAGGCGCGAGCCAACCCATCCGCACATCCCACCACAAGCAGCATGTCCAGCAGCAGTCTGTACCAACCAACTCTGGTTACCCCGGATTACCGCTTCAATCAagcccagcaacagcaaccgaTATTTGGGCGAGGGGGCAACGCTCCGACAGCCACACTGGTGATTCCCCAAGTGCCCCAACAGCACTTTCTCACCAACCCCCAGCAACAGGCACATTTTTcccatcagcagcagcagcagcaacaacagcagccgtCAACGCAACACCAGCctccacagcagcagcagcagcagcagccgcagcagcaacagcctgCCTTGAAATACACCTACGCCACTGCTTtgccgccaccaccgccgctgCAGCTCTTTACGCAGCAGCAGGCACTACCGGCAAACGCTACACAAAACAGTTCGCCGCCCCACGTGAAACCTCCTCCCGCCTATGGAGCCGCTATCAGTCAAATACGATCTCAGCACAACCAAAACAaacagcagccacagcaacatcagctacAGCCGCAACAACCACACGTAACCGTGCACCACAATCACAACCTAACCCTGACACCaccgacagcagcagcagcagcagcggcatcATCAGTAGGACCTGCAGCTGGCAAGCAGCTTGTTTCGAACAAAGCTCATACGGAAGTTTTCCTAAATCCCCCACCACCGCCGTCGCAAGCACAGATCCAAAGCCTAGGGCATCAGCAGAATCCAAATCTAAATACGCATGCTAACCCCCAGCTGCTGGGAACGTTGCACCAACCCTCCGGCAGACTGCACCAACAGCATCAGCCGCTTGGGTTGCAGGCCTACGCTTCTGGCTCAGGAGCCAGCAACAGTTGTAGCTCCACGCATTCGCTTGCGTCCAACTCCACGTCAGCCAGCATGCGCGGACATCGTCAGACCAACTCCCCCTTCGGCGCATTGCTTAATGCCGCTGCGGCTGTGGCCTGCCCCTCGCCTGCCTCGTCGACGGCATCTTCGTCAGTGCTGCGCTACGCAGAGTCGCCGGTGGCCCACTACTTGGAACGCGAGAACGGAGACTTTATTGTCCAGGAGACACCCAAGCACATTGTGGAGTGCGTGGAAAAGGAGGATGGCGAGTTCTCGGTGATTGAGCGTATATACCAGTCGCCGCCGAGTGTCCTACATATCcatgacgacgacgaggacgatgaggaggaggaagacGCTGAGGAAAACACCCACGAAGCACCCTTGGAGGACGATGATGGGGATGATGAGCGAGAGGAGAACAGTCGAAGTCGCACcaaggcaacaaaaaagtCACGCAAAACGAAGTCGAAGCGAAACTCCAAGCGTCTGTCGGACGAGGAGGAGTTCATGAGCATCAGCAGTGGTTGCGAAAGCGAGCCGGAACGGGAGCGGAAAAAGGATCATCAGACTGCGACCTCCACAGCGGCTTCCCTCCCGCCCTTGAGCACGGCTCCCTCAACGAGCAGGGCGGCGGCAACGGCCACATCGCCATCCAATCTAGCGGAAAATCATTCCAGTTCTGCTTCAAATTCCATATCCGCCAGCACCACTACTAAGTCCAAAAAGAACCGGATTACAGTGCTCAGCGACGTTCCGCTTAACATGAATGAGTACCTCGATCTAATGGGAAATATTGTGGCGTCCAGCCGGATTGGGGCAGCTCGTCCCTTTGCCGCTGTGGCTCCGATTCCATTAGTCAAGGTGGAAAAGGAGGAGCCGCTGGATGAATATGACAATGAAgcggagcagcaacagctggAGCAGAAGCCCAGCTTGGAGCATGCCACCACTAGCGTAATTCGAATGGCCAGCACCTCGGCGGCGGCCACATCAGTTTCCGCCGAGGACCTCACGCAGCCGCCACCCATGAAAGTGGAAGTAGATCCCAATACCAAGCTCCTGCCGCAGCGCTTCTCTACGCCGGCCCAGCAACTGCGTGGACCCAAGAAATTAGTCATTAAACCAaaggcgacggcgacggcaaCAGCGACAGCCACAGCGACGAAAAAGACTGACACCCCATCTTcctccagcaacagcaacagcagtagcagcagcaacccaACCATATCAAAAGATCTGGTGCAAGTGAAGAGTGAAAACGTAGAGGCTCCAACGAGCAGTAGCATTCTGGAAAAGCACCTGACCACCAACAGCGGCCGCAAACTGCTGCACCATTCGGCGGCGAATGACGATGATGCCCGCGTCCTGCTGGAGTTCGCCAACTCAAAGCAACCACCTCCATTGGCTGCCGCCAGCACCACTTTTGTGGTGAATGCCAATACCGGATTCCCCTCGGCCGGATCCGTTTTTGCTAGCACCTCCAAATCAGCAGCTTTAAGCAAACCAGAAGACGAATACATCCTTCCAGACAACAACAACCTAGATGTGGATGAGATTGTGATATCCTCGTCATCTTCCTACGCTTCCTCAGCGGCGCAGGTGCAGGCCGCGCTCCAGCCTCCGGACTTTAATTTCCTGTACCACCAGCAGACCACAAGCACTACCACAGTCACCACCGGTGCATACTTCAACTCCTTCTCCAAACAGCAGAATCTCCAGCACCATGGAGCGAGCGATGCCACCAACGCAGCCACTCTGGCCTCATCTTCGAGTAATTCCATGGACCACGACTCAATGAACGCCACATTCCGTGTGGCTAAGACTCAATCGCAGTCCTGGTATCAGCAGGATCACGACCAGGATGCACAGAATCAAGGTGGTGTGGGTGCCGGATCTGGTACGGCTTCTGGAAATAATCACGGTCACGACGTGGTGACCCAGCCCACTAACTTCAATGCTGCTCTGGCGTCCGTCGATTGCTGTAGTGTGGCCCTGGACGGCGATGCAAAATATCTGGATCTGGACGCCTGCAAGCGGGAGCAGCTGAGCAGCAGCAACCTGCCCTCGGCTTCTGCGTCCACATCGACCACGTCGTCATCGTTTGCCGGAGCAGGTACGGAGAGCAGCTTGGTGGGCGGCTTGAACATTCGTACAGACGAGAAGATGCCCGCCAAGGGTGAAATCTCAGAGCAGGAGAGCAACTGCGATGTTGAAAACTCATGGAGTGAATCGGTATACGGAGATATTTCTCAGCGGTACTTTAGAAATCAGTTTTCCGGAGGATACAATCCAGAGTGGCGTCAGGACTATTTTCCTTCTCACGATCTGAGCGGTCAGCCACGAGAGCAAAAGCATTTCGACTTCAATGCGCTTGATGATGAGGCCTCATCCAGTTCTAGAAAGAGCGACCTGTTAGATGTTGACCCAACGGCGGGCACCACCTCCTCCATTTGCACTTCCACGTCTTCGGCTTTGCTGGCAGGTCCACCCATAGCCTCGACATCCCGGGCAGCTGCCGAGGCGGAGGCGGCTGCCATGGCAATCGCCCAAAGGAAACAACACCGGCGCAAGCTCTACAAATGCCCCCATTGCGCGTCTATCTTTGAGAAGCTAAAGGATCGGAATGCGCATATGATTGGAGAGCACAACTATGTCCGTCAGAACCGTCGGCTCATCTGCACCCAACCGCAGGTGGGAGGTTCCGAAATGCTTCCACCCCAGCAGCAAACAATGCTCCTACCACCGGCAGAGGGGGCTGCCCTCCAAGAGGACTCCAAAGACGGCATTGTGAAAATCAAGCAGGAACAATGCCAAGATAAGACGGAGGTAGATCAAATGCACGCCAATTCCGAACTTTTGTCCGATGTCAAGGATTCGGAACTACTGGGCATCGGGGATGGCGATGGAGACGAGGATGGCGAGGGTGATTTTAAGCCACCTAGCCAGCTGGATGAAAAGATCGTGTTACCACCGTTGGCCATGACTACTCCGGCTGCTAAGCTAGCAGCGCTTTATCGGATGCTCATCGCTTACAATGAGTCCAAGCTCGGCCAAGAGCGGAACAACCTCAACGAGCTGGAACAAAAGGCCATGGAGAAGTCAATCTTTCTGTGCTACGTCTGCCGAACCGACTTTCCGTCAGTAAAGTTGTACGATGCCCATCTCACCGAGCATCCGGCCGAATGCTTCACTTGCGGCAAGAAGTTCTACCGCTGGAAGAACTTTTCACTCCATCTTAAGCGCCATCTCGGGTGGAAGGAGTTTGGCTGCTATGTCTGCGACAAGAAATTCGTGGTGCGCAGCGCTCTAGTCGAGCACATGCGGATGCACACAGGCCAAACGCCTCTCAAGTGTAAGATATGCGGCAAGAAGTTCAAACGCTACTCGAATCTAACACAGCATCGAAAGAGGCACACCAAGATGATCCTGCGCAAAAAGGAGTATGTGTGCCATTGCGGCGAAGTGCTGCCCTCGAAGGCTCGCTTCCTGTGGCACAAGGAAACACACGATCTGAAGCCAAAGTGCTGTCCATATTGCTGCGATCGATTCGTGCATGCGAATTCGCTCCGCCGTCACATTCGTCTGGCGCACTCGGAAAAATTCGATTATTCCGAGCCGATTGAGTGCCCGATGTGCAAGCAGACCTTTGCGAAGACCTCGATTAAGGCCCACATGGCAACGCATTCGACGGATCCACAGTACGACTGCACCATCTGCAACAAGAGCTTCTCCACCAAGTGGAACCTCAAGATCCACTCATGGGTACATGCCAATCGAACGGCCAAGCCATTCAAGTGCGAGTATTGCCCGAAGGCATTTGTGCGCGAGCTGGACTTCAAGAACCACATCAACGCGCACAAGCAGATCAAGCCGTATACGTGCGAGTACTGCGGCTGCaagttcatccgcaagtacaATTACATGCGGCATCGACGCGAGCACCACGGAACGAAGAAGTTTACATGCGATCAGTGCGACAAGACCTTCCACCGGCACTACTATCTCGTTGAGCATAGGCGCATGCATACCGGCGAGCGACCCTTCACCTGCACCATTTGTGGCAAGAGCTCCACCACCAAGACCAACCACAACAAGCATCTGAAGATCCATCACTCGCGCGATCCCTTTACCGTCGAGGTTTAA
- Protein Sequence
- MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGSGSGSGGSALAAAMLAGAGGGGGSGGGAANGVETIVIDDKTAITPLNVEVKPVVTAKSISAGTAPAVQTPPAPPPPLSSTLSTPATATTTSAANSSKSPNSNKLSNPPIKALKCAPPPTEARANPSAHPTTSSMSSSSLYQPTLVTPDYRFNQAQQQQPIFGRGGNAPTATLVIPQVPQQHFLTNPQQQAHFSHQQQQQQQQQPSTQHQPPQQQQQQQPQQQQPALKYTYATALPPPPPLQLFTQQQALPANATQNSSPPHVKPPPAYGAAISQIRSQHNQNKQQPQQHQLQPQQPHVTVHHNHNLTLTPPTAAAAAAASSVGPAAGKQLVSNKAHTEVFLNPPPPPSQAQIQSLGHQQNPNLNTHANPQLLGTLHQPSGRLHQQHQPLGLQAYASGSGASNSCSSTHSLASNSTSASMRGHRQTNSPFGALLNAAAAVACPSPASSTASSSVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDDEEEEDAEENTHEAPLEDDDGDDEREENSRSRTKATKKSRKTKSKRNSKRLSDEEEFMSISSGCESEPERERKKDHQTATSTAASLPPLSTAPSTSRAAATATSPSNLAENHSSSASNSISASTTTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDEYDNEAEQQQLEQKPSLEHATTSVIRMASTSAAATSVSAEDLTQPPPMKVEVDPNTKLLPQRFSTPAQQLRGPKKLVIKPKATATATATATATKKTDTPSSSSNSNSSSSSNPTISKDLVQVKSENVEAPTSSSILEKHLTTNSGRKLLHHSAANDDDARVLLEFANSKQPPPLAAASTTFVVNANTGFPSAGSVFASTSKSAALSKPEDEYILPDNNNLDVDEIVISSSSSYASSAAQVQAALQPPDFNFLYHQQTTSTTTVTTGAYFNSFSKQQNLQHHGASDATNAATLASSSSNSMDHDSMNATFRVAKTQSQSWYQQDHDQDAQNQGGVGAGSGTASGNNHGHDVVTQPTNFNAALASVDCCSVALDGDAKYLDLDACKREQLSSSNLPSASASTSTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDVENSWSESVYGDISQRYFRNQFSGGYNPEWRQDYFPSHDLSGQPREQKHFDFNALDDEASSSSRKSDLLDVDPTAGTTSSICTSTSSALLAGPPIASTSRAAAEAEAAAMAIAQRKQHRRKLYKCPHCASIFEKLKDRNAHMIGEHNYVRQNRRLICTQPQVGGSEMLPPQQQTMLLPPAEGAALQEDSKDGIVKIKQEQCQDKTEVDQMHANSELLSDVKDSELLGIGDGDGDEDGEGDFKPPSQLDEKIVLPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLNELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMILRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSEKFDYSEPIECPMCKQTFAKTSIKAHMATHSTDPQYDCTICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKTFHRHYYLVEHRRMHTGERPFTCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00580145;
- 90% Identity
- iTF_00580145;
- 80% Identity
- -