Basic Information

Insect: Drosophila parabipectinata
Gene Symbol: -
Assembly: GCA_018153455.1
Location: JAECYA010000178.1:22327897-22333577[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.11 8.1 7.0 0.4 1 23 1288 1311 1288 1311 0.94

2 13 6.4 4.8e+02 1.4 0.2 1 23 1465 1487 1465 1487 0.91

3 13 0.00014 0.011 16.1 2.7 2 23 1490 1511 1490 1511 0.97

4 13 5.5e-05 0.0041 17.4 0.2 3 23 1519 1539 1517 1539 0.98

5 13 4.6e-07 3.4e-05 23.9 4.1 2 23 1546 1567 1545 1567 0.97

6 13 4.3 3.2e+02 2.0 0.4 5 23 1580 1598 1578 1598 0.96

7 13 1.1 80 3.9 5.4 3 23 1605 1626 1603 1626 0.93

8 13 0.027 2 8.9 0.2 2 23 1637 1657 1636 1657 0.96

9 13 1.4e-05 0.0011 19.2 0.6 1 19 1663 1681 1663 1685 0.95

10 13 2.8e-05 0.0021 18.3 0.4 1 23 1693 1715 1693 1715 0.98

11 13 8.2e-05 0.0061 16.8 7.6 1 23 1721 1743 1721 1744 0.96

12 13 0.00037 0.028 14.8 6.6 1 23 1749 1771 1749 1771 0.98

13 13 0.0021 0.16 12.4 6.1 1 23 1777 1799 1777 1800 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.11	8.1	7.0	0.4	1	23	1288	1311	1288	1311	0.94
2	13	6.4	4.8e+02	1.4	0.2	1	23	1465	1487	1465	1487	0.91
3	13	0.00014	0.011	16.1	2.7	2	23	1490	1511	1490	1511	0.97
4	13	5.5e-05	0.0041	17.4	0.2	3	23	1519	1539	1517	1539	0.98
5	13	4.6e-07	3.4e-05	23.9	4.1	2	23	1546	1567	1545	1567	0.97
6	13	4.3	3.2e+02	2.0	0.4	5	23	1580	1598	1578	1598	0.96
7	13	1.1	80	3.9	5.4	3	23	1605	1626	1603	1626	0.93
8	13	0.027	2	8.9	0.2	2	23	1637	1657	1636	1657	0.96
9	13	1.4e-05	0.0011	19.2	0.6	1	19	1663	1681	1663	1685	0.95
10	13	2.8e-05	0.0021	18.3	0.4	1	23	1693	1715	1693	1715	0.98
11	13	8.2e-05	0.0061	16.8	7.6	1	23	1721	1743	1721	1744	0.96
12	13	0.00037	0.028	14.8	6.6	1	23	1749	1771	1749	1771	0.98
13	13	0.0021	0.16	12.4	6.1	1	23	1777	1799	1777	1800	0.96

Sequence Information

Coding Sequence: ATGGTCGACAACAGTGTCCAGTGCCCCGTGTGCACCTTGTACCTGCATGCGGGCATGAATCTCTCCGATCACTTGGAGACTCATCCCAAGGAGCAGGTGATCAAGGCACTGGTGCAAATGACGATCGTAGGCCCTGCATCTGGGAGCGGCGGCAGTGCCCTGGCGGCCGCAATGCTGGCAGGAGCTGGGGGCGGTGGAGGATCAGGTGGTAGTGCAGCGAGTAGTGTTGACGCCATCGCAGTAGATGACAAAACAGCTATTGCGCCTTTGAATGCCGAAGTGAAACCAGTTGTGACAGCCAAATCCATATCAGCTGGAACGCCAGCGGTGCAGACGCAGACGCAGACGCCGCCGCCGCCACCGCCGCTCTCCTCAACTCTACCAACGCCCGCCACCACCTCTACCTCCGCCGCAAACAGCTCCAAATCCCCAAATAGCAACAAACTGAGCAATCCACCGATAAAAGCACTGAAAAGCGCACCGCCCCCGACTGAGGCGCGAGCCAACACATCCGCACATCCCACCACAAGCAGCATGTCCAGTAGTCTCTACCAGCCAACGCTGGTTACCCCGGATTACCGCTTCAATCACCCACAGCAGCAGATGTTTGGGCGTGGCGGCAATGCTCCGACAGCCACACTGGTGATTCCCCAAGTGCCCCAGCAGCACTTCCTCGCCAACTCCCAGCAACAGGCACACTTCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCCTTGAAATACACCTACGCCACTGCTTTGCCGCCGCCACCGCCGCTGCAGCTCTTCACGCAGCAGCAGGCCCTGCCGGCACCTGCAACGCAAACCAATTCGCCGCCACACGTGAAACCTCCGCCCGCCTATGGAGCCGCTATCAGTCAAATACGATCTCAGCACAACCAAAACAAACAGCAGCCGCAGCAACAACAGCTGCAGCCGCAACCCCCACACGTAACCGTGCACCACAATCACAATCTAACCCTGACACCACCGACAGCAGCCGCGGCATCATCAGTAGGACCGGCAGCTGGCAAGCAGCTTGTTTCTAGCAAAGCCCATACGGAAGTTTTCCTGAATCCCCCACCACCGCCGTCGCAGGCACAGATCCAGAATCTGGGCCATCAGCAGAATCCAAACTTAAGCACGCATGCTAACCCCCAGCTGCTGGGAACATCGCCCTCCGGCAGATTACATCCGCAGCATCAGCCCCTCGGCTTGCAGGCCTATGCCTCTGGCTCAGGAGCCAGCAGCAGCTGCAGCTCGTCGCTCTCGCTGTCGGTTGGTGCATCCAGCTCCACATCGGCCAGCATTCGCGGCCATCGTCAGACCAACTCGCCCTTCGGGGCGTTGCTTAATGCTGCTGCGGCTGTTGCCTGCCCTTCGCCTGCCTCGTCCACGGCATCTTCGTCAGTGCTGCGCTACGCAGAGTCGCCGGTGGCCCACTACTTGGAACGCGAGAACGGAGACTTCATTGTCCAAGAGACTCCCAAGCACATTGTGGAGTGCGTTGAGAAGGAAGATGGCGAGTTCTCGGTGATTGAGCGCATATACCAGTCTCCGCCGAGTGTCCTGCATATCCACGATGAGGACGAGGACGATGAGGAGGAGGAGGACGCTGAAGACGCCCACGAAGCGCCGCTGGAGGACGATGACGGGGATGACGAGCGAGAGGAGAACAGTCGAAGTCGCACCAAGGCAACCAAGAAGTCCCGAAAGACGAAGTCGAAGCGAAACTCCAAGCGTCTGTCGGACGATGAGGAGTTCATGAGCATCAGCAGTGGCTGCGAAAGTGAGCCCGAACGGGAGCGGAAAAAGGATCATCAGACCGCGAACTCTACAACGTCTTCCCTCCCACCCTTAAGCACGGCTCCCTCAACGAGTAGGGCGGCTGCCACGGCCACATCGCCATCCAATACAGCGGAAAATCATTCCAGTTCTGCTTCAAATTCCATATCCGCCAGCACCACCACCAAATCCAAGAAGAACCGGATTACAGTGCTCAGCGACGTTCCGCTCAACATGAACGAGTACCTCGATCTAATGGGAAACATTGTGGCCTCCAGTCGCATTGGGGCGGCCCGTCCCTTTGCCGCCGTGGCTCCGATTCCGTTGGTTAAGGTGGAAAAGGAGGAGCCGCTGGATGAATATGACAATGAAGCTGAGCAGCAGCAGCAGCAGCTGGAGCAGAAGCCCAGCCTGGAGCACGGCACCACTAGCGTAATTCGAATGGCCAGTACGTCGGTGGCGGCCACATCCGTTTCGGCCGAAGACCTAACGCAGCCGCCACCCATGAAAGTGGAAGTAGACCCCAACACCAAGCTCCTGCCGCAGCGCTTCTCTACTCCCGCCCAGCAACTGCGAGGGCCCAAGAAATTAGTCATTAAACCAAAGGCGACGGCGACGGCAACGGCGACAGCTACAGCGACGAAAAAGACTGACACCCCATCTTCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAGTGAAAGCCTAGAGGCTCCAGCGAGCAGTAGCATTCTGGAAAAGCACCTGACCACCAACAGCGGCCGCAAGCTGCTGCATCATTCGGCGGCGAATGACGATGATGCCCGCGTTCTGCTGGAGTTCGCCAACTCCAAGCAACCACCTCCGTTGGCTGCCGCTAGCACCACTTTTGTGGTGAACGCCAATACTGGATTCCCCTCGGCCGGATCCGTTTTCGCCAGCACCTCCAAATCAGCAGCTTTAAGCAAACCAGAAGACGAGTACATTCTTCCAGACAACAACAACCTAGATGTGGATGAGATTGTGATATCCTCGTCGTCTTCCTACGCTTCCTCGGCGGCGCAGGTGCAGGCCGCGCTCCAACCGCCGGACTTCAACTTCCTGTACCACCAGCAGACCACCAGCACTACCACAGTCACCACCGGTGCATACTTCAATGCCTTCTCCAAACAGCAGAATCTCCAACAACATGGAGCTAGCGACGCCACCAATGCAGCCACTCTGGCCTCATCTTCAAGCAATTCCATGGACCATGACTCGATGAACGCCACATTCCGCGTGGCTAAGACTCAATCGCAGTCCTGGTATCAGCAGGACCACGACCAGGATGCACATAATCAAGGTGGCGTGGGAGCCGGATCTGGTGCAGCTTCTGGTAATCAGGGTCACGATGTGGTGGCCCAGCCGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGATGCCAAATATCTGGATCTGGACGCCTGCAAGCGGGAGCAGCTGAGCAGCAGCAACTTGCCCTCGGCCTCAGCCTCCACTTCCACCACATCGTCATCGTTCGCTGGAGCTGGCACGGAAAGCAGCTTGGTGGGCGGCTTGAACATTCGTACAGATGAGAAGATGCCCGCCAAGGGTGAAATCTCGGAGCAGGAAAGCAACTGCGATGTTGAAAACTCGTGGAGCGAATCGGTGTACGGAGATATTTCACAGCGGTACTTTAGAAATCAGTTTTCCGGAGGATACAATCCAGAATGGCGGCAGGACTACTTTCCCACTCATGATCTAAGCGGTCAGCCACGAGAGCAAAAGCATTTCGACTTCAATGCACTTGATGACGAGGCGTCATCCAGCTCGAGGAAGAGCGATCTGTTGGACATTGACCCTACGGCGGGCACCACCTCCTCCATTTGTACATCCACGTCTTCGGCTTTGCTGGCTGGTCCACCCATAGCCTCGACTTCGCGGGCTGCTGCCGAGGCGGAGGCGGCTGCCATGGCCATCGCCCAAAGGAAACAGAATCGGCGCAAGCTCTACAAATGCCCCCACTGTGCGTCCATCTTCGAGAAACTGAAGGATCGGAATGCGCACATGATCGGAGAGCATAACTATGTCCGTCAGAACCGTCGGCTCATCTGCACCCAACCGCAGGTGCCAGGTTCCGAGATGCTGCCACCCCAGCAGCAAACAATGCTCCTGCCACCGGCCGAGGGGAGTGCACTTCAAGAGGACTCCAAAGACGGCATTGTGAAAATCAAGCAGGAACAATGCCAAGATAAGACGGATGTGGAGCAAATGCACCAAAACTCCGAACTGCTGACAGACGTCAAGGACTCGGAACTGCTGGGAATCGGGGATGCTGATGGAGACGAGGATGGCGAGGGCGATTTCAAGCCGCCCAGTCAACTGGACGAAAAGATCGTACTACCACCGCTGGCCATGACTACGCCGGCTGCTAAGCTAGCAGCGCTCTATCGGATGCTCATCGCTTACAATGAGTCCAAGCTGGGCCAAGAGCGGAACAACCTCAACGAGCTGGAGCAGAAGGCCATGGAGAAGTCAATCTTCCTGTGCTATGTCTGCCGCACCGACTTTCCGTCAGTGAAGCTGTACGACGCCCATCTCACCGAGCACCCGGCCGAGTGCTTCACCTGCGGCAAGAAGTTCTACCGCTGGAAGAACTTTTCACTCCATCTTAAGCGGCATCTCGGGTGGAAGGAGTTCGGGTGCTACGTCTGCGACAAGAAATTCGTGGTACGCAGTGCTCTGGTCGAGCACATGCGGATGCATACGGGCCAAACGCCTCTCAAGTGCAAGATATGCGGCAAGAAGTTTAAGCGGTACTCGAATCTAACACAGCACCGGAAAAGGCACACCAAGATGATACTGCGCAAGAAGGAGTACGTGTGCCACTGCGGCGAGGTGCTGCCCTCGAAGGCACGCTTCTTGTGGCACAAGGAAACACACGATCTGAAGCCGAAGTGCTGTCCCTATTGCTGCGATCGATTCGTGCATGCGAACTCGCTGCGACGCCACATTCGTCTGGCGCACTCGGAAAAATTCGATTACTCCGAGCCGATAGAGTGCCCGATGTGCAAGCAGACCTTCGCCAAAACCTCGATCAAGGCCCACATGGCGACGCATTCGACGGATCCCCAGTACGACTGTACCATCTGCAACAAGAGCTTCTCCACCAAGTGGAACCTCAAGATCCACTCGTGGGTACATGCCAACCGAACGGCCAAGCCTTTCAAGTGCGAGTACTGCCCGAAGGCGTTTGTGCGCGAGCTGGACTTCAAGAACCACATCAACGCGCACAAGCAGATCAAGCCGTACACGTGCGAGTACTGCGGCTGTAAGTTCATCCGCAAGTACAACTACATGCGGCATCGGCGCGAGCACCACGGAACCAAGAAGTTCACATGCGACCAGTGCGACAAGACCTTCCACCGGCACTACTATCTCGTCGAGCACCGGCGCATGCACACCGGCGAGCGACCCTTCACCTGCACCATCTGTGGCAAGAGCTCCACCACCAAGACCAACCACAACAAGCATCTGAAGATCCATCACTCGCGCGACCCCTTTACTGTCGAGGTCTAA
Protein Sequence: MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGPASGSGGSALAAAMLAGAGGGGGSGGSAASSVDAIAVDDKTAIAPLNAEVKPVVTAKSISAGTPAVQTQTQTPPPPPPLSSTLPTPATTSTSAANSSKSPNSNKLSNPPIKALKSAPPPTEARANTSAHPTTSSMSSSLYQPTLVTPDYRFNHPQQQMFGRGGNAPTATLVIPQVPQQHFLANSQQQAHFSXXXXXXXXXXXXXXXALKYTYATALPPPPPLQLFTQQQALPAPATQTNSPPHVKPPPAYGAAISQIRSQHNQNKQQPQQQQLQPQPPHVTVHHNHNLTLTPPTAAAASSVGPAAGKQLVSSKAHTEVFLNPPPPPSQAQIQNLGHQQNPNLSTHANPQLLGTSPSGRLHPQHQPLGLQAYASGSGASSSCSSSLSLSVGASSSTSASIRGHRQTNSPFGALLNAAAAVACPSPASSTASSSVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDEDEDDEEEEDAEDAHEAPLEDDDGDDEREENSRSRTKATKKSRKTKSKRNSKRLSDDEEFMSISSGCESEPERERKKDHQTANSTTSSLPPLSTAPSTSRAAATATSPSNTAENHSSSASNSISASTTTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDEYDNEAEQQQQQLEQKPSLEHGTTSVIRMASTSVAATSVSAEDLTQPPPMKVEVDPNTKLLPQRFSTPAQQLRGPKKLVIKPKATATATATATATKKTDTPSSSXXXXXXXXXXXXXXXXXXXXXXKSESLEAPASSSILEKHLTTNSGRKLLHHSAANDDDARVLLEFANSKQPPPLAAASTTFVVNANTGFPSAGSVFASTSKSAALSKPEDEYILPDNNNLDVDEIVISSSSSYASSAAQVQAALQPPDFNFLYHQQTTSTTTVTTGAYFNAFSKQQNLQQHGASDATNAATLASSSSNSMDHDSMNATFRVAKTQSQSWYQQDHDQDAHNQGGVGAGSGAASGNQGHDVVAQPTXXXXXXXXXXXXXXXXXXDAKYLDLDACKREQLSSSNLPSASASTSTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDVENSWSESVYGDISQRYFRNQFSGGYNPEWRQDYFPTHDLSGQPREQKHFDFNALDDEASSSSRKSDLLDIDPTAGTTSSICTSTSSALLAGPPIASTSRAAAEAEAAAMAIAQRKQNRRKLYKCPHCASIFEKLKDRNAHMIGEHNYVRQNRRLICTQPQVPGSEMLPPQQQTMLLPPAEGSALQEDSKDGIVKIKQEQCQDKTDVEQMHQNSELLTDVKDSELLGIGDADGDEDGEGDFKPPSQLDEKIVLPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLNELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMILRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSEKFDYSEPIECPMCKQTFAKTSIKAHMATHSTDPQYDCTICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKTFHRHYYLVEHRRMHTGERPFTCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00580145;
90% Identity: iTF_00580145;
80% Identity: -