Dnas008234.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila nasuta
Gene Symbol
Paxbp1
Assembly
GCA_017165715.1
Location
Scf:194547-202357[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-29 7.4e-26 90.9 0.5 4 272 651 858 648 860 0.94

Sequence Information

Coding Sequence
ATGTCGCTGTTTCGCAAACCGAAGAAAATACAGCGCCGCGTTTTCTCCAGCAATGCGGACGAGGACGACAACACGTCCACAATGGACGTTGATGGGGACTTGGAAACACCCCCTCCTCCCATAATTTCGTTGTCCGGAAGCGGGAGGCGGGATAAGGATAAAAGTAAGAAATCTAACAAATCATCCGAAGACAATGGTGTAACAACTGCTCAAGCTCACAACAAGCCCAAGGCATTGCTTAGTTTTGCTGACGATGAGGATGATGGGGAGGTATTTCAAGTGCGCAAATCTTCTCACAGCAAGAAAGTAATGCGAATGCTGGACAAGGAACGTCGCAAGAAGAAGCGGGAGGAGCGAGCGGAGCACTCTGGTCATAGTGGAGGAGTAATGGGTTATGAAAATGGTAGTACAACAACACAACAGCAGCAGCATTTAGAGACGTCCAGTGGCACTGTCACTTCGGGTGTTGGTACTGCCAACTCAAGTAGATATAAAAGTGCCTCGAGTACGGCGAGTGACAATCCGAACGTACAAAGTAAAAGTAAAAAGTGTGATAATGATATGATCCAAACCGAAATACGCACAGACGACTTTGTGCTCGTGGTCAAAAAATCTGAAACGCCTGATGTTGTTTTAAATGGACGTGCCGCACTTTGTGCTGGCCGCGATGATGTAAGCGACGATGAGGGACGACTGGACGACGATGGCGACAGTGATAAGACACGTCATCGTTTCTCAAAACCAGAGCACTTAAAGCAAATGCTGGAGAGTGGTTCCATACCCGATGCAGCGATGATACATGCGGCACGCAAACGCAGACAGCGAGCAAGAGAGCAAGGTGCTGGTGATTATATACCAATCGAAGAACCCAAAGAGCCGCCCAAGCTTAGCTCACGTTTGCCACGCGAAGATGTCGAGGGCGATCAATCGGACGATGAGGAACGCATGGATATGAACGATATAACGGGACGAAAGGAGCGCGAAGAGCGTCGTGAACAGTTCTATGCTGTTGAAAATGATTTAACCGAGGAAGATTCTGATCGTGAAATGCATGAGTGGGAAAACCAACAAATACGCAAAGGTGTCACCGGCGCCCAATTGGTGCATGCTCAGCATGAAACTGTTCTATCACGTTTCATGATCAAGCCAGCAGCGCCAACGGGCTTGGAATCCTTGCAATTGGAGGATGCGGTGCGTCAAGTGCCGCCGTCGACATCAACCTTGTTGGAGCAGGCCTATGCAAAGAACGCTATAGATAAAACAAGTAATTTGGCTACAGCGATGCGATCAAGTTTCTCCAAGCCTAAAAAAGAGAAAGCTAAAGCGACGGCACTGCGAACACCTCAGGAGATGCGTACAGCGATCACAACACGCATTAATGAGCTGCAGGATCGCAACGATGACCACAGTGCGTCAATTACACGCATTGCCAACGAGCTGAAAGCATTGAAGCTACAGGAACTGGAATGTCAACAAAATGCCCCAACGGCAGCGGCCAAATACAAGTTCTATCAGGAGATCAAGTGTTATGTCAACGATTTAGTTGATTGCCTGGCAGCCAAATCGCCGCAAATCAACGATCTGGAGAAACGCGCCCTGCAGCAATATGGTAAGAGTCAACGTTATCTGGTTAATCGTCGACGTCAGGATGTGCGTGATCAGGCCAAAGAGATGGCAGAAGCATCAAAATCTATGACAGCTGCTGTGAAACGAACACCAGAATACGAGGAGCAAGTCCGTCGTGCCGCTGAACGGGAAGGGCGTCGCACGCGTCGACGTTGCGATCGAGAACGAAATGACTTACTCGCCTCGCATCTAGACGGCATGTCCAGTGATGATGAGATTGCCGACCAACAGCAGGAACAATGTCTGGCGGCAACAGCGCTCATCGAACAGCAAGCAGCCGAGGCTTTCGAAGATGTGGTCGATGATTTCTGCAAAATCGAGCTGATACTTATCAAGTTTTACGCTTGGCGTAAAACCGATATGAGTTCGTATCAAGATGCCTTCGTTAGTCTGTGCCTGCCCAAATTATTGGCGCCTCTGGTGCGTCACGAGTTGCTGCTATGGTCACCGTTACTTCAGGAATACACAGATATAGAAACAATGCATTGGTATCAAGCCTGCATGTTGTATGCATTCGAGTCGGAGGAAACTATTGAGCGGCTGAAGCAGGATCCTGATATTAACCTGGTGCCCTCGCTTATAGAAAAGATTGTGCTTCCAAAAGTGAATTGTCTGGTCGCCGAATGCTGGGATCCATTATCAACGACGCAAACGCTGCGTCTTATCGGCTTTATCAATCGCTTAGGTCGCGAATTTCCGCTTCTTAGCAGCAATAAACAATTGCGAAAACTTTTTGAGTCAATTTTAGATCGCATGCGGCTGGCTCTCGAAAATGACGTTTTCATACCTATTTTTCCAAAGCAAGTGCAAGAAGCCAAGGGCTCTTTCTTTCAGCGACAGTTTTGCAGTGGTCTTAAATTATTTCGAAACTTCCTTAGCTGGCAGGGAATTTTGGCAGACAAACCGTTGCGGGAGCTAGCTATTGGATCACTTTTAAATCGATATCTTTTATTAGCCATTCGTGTGTGCACACTAAATGATGCGATTGGCAAAGCATACATTATTGTAAATACCCTGCCAACAGTTTGGCTCCTTCCTAACAGTGATACACTAAAAAATTTGGAGCTGTTTATTACATTCATACGACAAACGTTGGAAACTTGTGATGCTAACAATCCCCTTTTTATGCAATCCTGTGAGAAGGCTAAGCAAATACTACAAAGACTACATAGCTTGTAA
Protein Sequence
MSLFRKPKKIQRRVFSSNADEDDNTSTMDVDGDLETPPPPIISLSGSGRRDKDKSKKSNKSSEDNGVTTAQAHNKPKALLSFADDEDDGEVFQVRKSSHSKKVMRMLDKERRKKKREERAEHSGHSGGVMGYENGSTTTQQQQHLETSSGTVTSGVGTANSSRYKSASSTASDNPNVQSKSKKCDNDMIQTEIRTDDFVLVVKKSETPDVVLNGRAALCAGRDDVSDDEGRLDDDGDSDKTRHRFSKPEHLKQMLESGSIPDAAMIHAARKRRQRAREQGAGDYIPIEEPKEPPKLSSRLPREDVEGDQSDDEERMDMNDITGRKEREERREQFYAVENDLTEEDSDREMHEWENQQIRKGVTGAQLVHAQHETVLSRFMIKPAAPTGLESLQLEDAVRQVPPSTSTLLEQAYAKNAIDKTSNLATAMRSSFSKPKKEKAKATALRTPQEMRTAITTRINELQDRNDDHSASITRIANELKALKLQELECQQNAPTAAAKYKFYQEIKCYVNDLVDCLAAKSPQINDLEKRALQQYGKSQRYLVNRRRQDVRDQAKEMAEASKSMTAAVKRTPEYEEQVRRAAEREGRRTRRRCDRERNDLLASHLDGMSSDDEIADQQQEQCLAATALIEQQAAEAFEDVVDDFCKIELILIKFYAWRKTDMSSYQDAFVSLCLPKLLAPLVRHELLLWSPLLQEYTDIETMHWYQACMLYAFESEETIERLKQDPDINLVPSLIEKIVLPKVNCLVAECWDPLSTTQTLRLIGFINRLGREFPLLSSNKQLRKLFESILDRMRLALENDVFIPIFPKQVQEAKGSFFQRQFCSGLKLFRNFLSWQGILADKPLRELAIGSLLNRYLLLAIRVCTLNDAIGKAYIIVNTLPTVWLLPNSDTLKNLELFITFIRQTLETCDANNPLFMQSCEKAKQILQRLHSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00556516; iTF_00562461; iTF_00501794; iTF_00511266; iTF_00553027; iTF_00560259; iTF_00593091; iTF_00582948; iTF_00528037; iTF_00552294; iTF_00597350; iTF_00513448; iTF_00500299; iTF_00496588; iTF_00482222; iTF_00498863; iTF_00607055; iTF_00557200; iTF_00570384; iTF_00576336; iTF_00522161; iTF_00609873; iTF_00543732; iTF_00619829; iTF_00574038; iTF_00499575; iTF_00485849; iTF_00548793; iTF_00598873; iTF_00616186; iTF_00558651; iTF_00577052; iTF_00525117; iTF_00542429; iTF_00566781; iTF_00495102; iTF_00498142; iTF_00518430; iTF_00521342; iTF_00595934; iTF_00497375; iTF_00564640; iTF_00533793; iTF_00509090; iTF_00614178; iTF_00595236; iTF_00520621; iTF_00589538; iTF_00508323; iTF_00561027; iTF_00588835; iTF_00535301; iTF_00550885; iTF_00585189; iTF_01324101; iTF_00510534; iTF_00512710; iTF_00522950; iTF_00526566; iTF_00534570; iTF_00490769; iTF_00506100; iTF_00530942; iTF_00563166; iTF_01553222; iTF_01559750; iTF_01553956; iTF_01551721; iTF_01555403; iTF_01550988; iTF_01548846; iTF_01558286; iTF_01556824; iTF_01550269; iTF_01552447; iTF_00567527; iTF_00547347; iTF_00541752; iTF_00579271; iTF_00582247; iTF_00585959; iTF_01323367; iTF_01320459; iTF_01324885; iTF_01325653; iTF_00506856; iTF_00575574; iTF_00528796; iTF_01322634; iTF_00495852; iTF_00538220; iTF_00572589; iTF_00470862; iTF_00568969; iTF_00478715; iTF_00530255; iTF_01326384; iTF_01557552; iTF_00519153; iTF_00610641; iTF_00802833; iTF_01559025; iTF_01554689; iTF_00608434; iTF_00557907; iTF_00583673; iTF_00805173; iTF_00803589; iTF_01321911; iTF_01327159; iTF_00601784; iTF_00587389; iTF_00616893; iTF_00475208; iTF_01321182; iTF_01327880; iTF_00537503; iTF_00598143; iTF_00805959; iTF_00901490; iTF_00832155; iTF_01356125; iTF_01556114; iTF_00551577; iTF_00544482; iTF_00540358; iTF_00554375; iTF_00519912; iTF_00545229; iTF_00479475; iTF_00599572; iTF_00473052; iTF_00493639; iTF_00532361; iTF_00476614; iTF_00546644; iTF_00559478; iTF_00502514; iTF_00516251; iTF_00573308; iTF_00509806; iTF_00568241; iTF_01549562; iTF_00584414;
90% Identity
iTF_00509090;
80% Identity
-