Basic Information

Insect: Drosophila hamatofila
Gene Symbol: PAXBP1
Assembly: GCA_035045345.1
Location: JAWNPA010000047.1:146714-150501[-]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.6e-29 8.1e-26 91.4 1.5 4 272 654 861 651 863 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.6e-29	8.1e-26	91.4	1.5	4	272	654	861	651	863	0.95

Sequence Information

Coding Sequence: ATGTCGCTTTTTCGCAAGCCCAAGAAAATACAGCGACGGGTCTTCTCCAGTAATGCAAACGAGGACGAGGATGTGTCGGCTGTGGAAGTTCATAGAGATTTGGAAACGCCCCCACCCCCGCCGCCAATAATTTCCTCATCCGGCAAGCGTGACAaagataaaagcaaaaaaacaattcgACAATCCGATGATAGTGGAGCAATATCCGGCGGAGGCGCCGTCCAGCACAAGCCAAAGGCTCTTCTCAGCTTTGCTGACGATGAGGACGATGGAGAAGTGTTCCAAGTGCGCAAATCGTCGCACAGTAAGAAAGTAATGCGAATGCTGGACAAGGAGCGTCGCAAAAAGAAGCGCGAGGAGCGAGCGGAAATAACGGGACACAGCGGACATCTTGGTTATGAGAATGGTGGTAATACACAGCATTTAGAGTCGTCCAGTGCCACCTCGGCTTTGGCTTCGGCTTCGGGTTCTGGTGCTGCTGGTTCAGCCAATCTCTCTAGTAGATATAAATGTACTTCGATAGCTAGTGACAATGCGAGCGtacaaagtaaaagtaaaaagtgtGATAATGATATGATCCAAACCGAAATACGCACAGACGACTTTGTGCTTGTGGTCAAGAAATCGGAAACTCCAGATGTGCTATTAAATGGACGCGCCGCGCTTTGTGCTGGTCGCGACGATATGAGTGACGATGATGAATTTGATGATAGGGAGAACGATAAGACGCAGCATCGTTTCTCAAAGCCGGAGCACTTAAAGCAAATGTTAGAGAGCGGCTCCATACCAGATGCTGCAATGATACATGCGGCACGAAAACGTAGACAGCGGGCCAGGGAGCAAGGAGCTGTGGACTACATACCCATCGAGGAGCCTAAGGAAACGCCAAAGCTGAGTACACGCTTGCCACGCGAGGATGTGGAGGGCGATCAGTCGGATGATGAGGAGCGCATGGATATGAACGACATAACGGGTCGCAAGGAGCGCGAAGAGCGTCGCGAACAGTTCTATGCCGTTGAGAATGATTTAACTGAGGAAGATTCCGATCGCGAAATGCACGAATGGGAGAATCAGCAAATACGAAAAGGCGTCACTGGCGCTCAGCTTGTTCATGCCCAGCACGAGACTGTCCTATCGCGGTTCATGATCAAACCGGCAACGAACAGCGGAGCAGATGGAGCGGGAGCTTTCGATTTGGATATGGATCCAGTGCAGCCGTCGACTGCGACGCTGCTGGAGCAGGCCTATGCAAAGACCAACCTAGACAAAAATACTGTAATGGCAGCCACTATTCGTGCCACTCTCAACAAAACCAAGCGAGAGAAAACCAAGGCAGCCGCGCTGCGTACCCCGCAGGAGATGCGATCCTCGATTGTAATGCGTCTCACAGAGCTGCGAGAGCGGAACGATGAACACAATGCGAGCATTACGCGTATCGAGGCGGAGCTGAAATCCTTGAAACTGCAGCAGAACGAGTGCAAACAGAATGCACCCACGGCGGCggctaaatataaattttatcagGAGATCAAATGCTATGTGAATGATTTGATAGATTGTCTGGCGGCGAAATCGCCGATGATAAATGATCTGGAGAAACGCGCTCTGCAGCTCTATAGTAAAAATCAACGCTATTTGGTCAATCGAAGGCGGCAGGATGTCCGCGATCAGGCCAAGGAAATGGCGGAGGCCTCAAAACCTGTACAAGCGGCAGCACGTCGAACACCGGAATACGAAGAGCAAGTGCGTCGAGCAGCTGAAAGGGAAGGCCGACGCACGCGTCGACGTTGCGACCGTGAGCGAAATTATTTGTTGGCCACCCATCTGGATGGCATGTCCAGCGATGACGAGATTGCCGATCAACAACAGGAGCAGTGCCTAGCGACAAAGGCGTTGATCGAAGCGCAAGCAGCGGAGGCCTTTGAAGACGTCAACGACGACTTCTGCAAAGTTGATCTGATACTCATGAAGTTCTATGCCTGGCGTAAAACGGATATGAGCTCGTATCAGGACGCGTTTGTCAGTCTCTGTCTGCCTAAGTTGCTCGCTCCACTGGTGCGCCACGAGCTTCTGCTCTGGTCACCGTTGCTGGAGGAATATACAGACATTGAGACAATGCATTGGTATCAAGCCTGTATGCTCTATGCCTGTCAGCCAAATGAAACGGTGGAACAACTCAAACTGGATCCAGACCTCAACCTTGTGCCTTCGCTTATAGAAAAGATTGTGCTGCCAAAAGTGAATTCTCTTGTCGCGGAATGCTGGGATCCACTGTCCACAACACAAACGCTACGTCTTGTCGGCTTCATCAATCGCCTGACTCGCGAATTTccgctcagcagcagcagtaagcAACTGAAAAAGCTTTTTGAGTCAATCATGGAACGCATGCGACTCGCACTCGAAAATGATGTTTTCATACCCATCTTTCCTAAACAGGTGCAAGAGGCCAAAGGCTCGTTCTTTCAGCGCCAGTTTTGTAGCGGGCTTAAACTGTTTCGTAACTTTCTCAGCTGGCAGGGCATACTTGCTGACAAGCCCTTAAGAGAGCTAGCTATTGGAGCTCTGTTGAATCGCTATCTACTAATGGCCATGCGCGTGTGCACACCAAATGATGCTATCAGTAAAGTCTCGATTATTGTGAATACTCTGCCAACGGTGTGGTTGCTGACCAACAGCGATACGCTAAAGAATTTGGAGGTATTCATTAGCTATATACGGCAAACGTTGGATAATTGCGATGCAACCAACCCACTtcttatgcaATCCTGCGACAAGGCCAAGCAGATTCTACAAAGACTACATAgcttataa
Protein Sequence: MSLFRKPKKIQRRVFSSNANEDEDVSAVEVHRDLETPPPPPPIISSSGKRDKDKSKKTIRQSDDSGAISGGGAVQHKPKALLSFADDEDDGEVFQVRKSSHSKKVMRMLDKERRKKKREERAEITGHSGHLGYENGGNTQHLESSSATSALASASGSGAAGSANLSSRYKCTSIASDNASVQSKSKKCDNDMIQTEIRTDDFVLVVKKSETPDVLLNGRAALCAGRDDMSDDDEFDDRENDKTQHRFSKPEHLKQMLESGSIPDAAMIHAARKRRQRAREQGAVDYIPIEEPKETPKLSTRLPREDVEGDQSDDEERMDMNDITGRKEREERREQFYAVENDLTEEDSDREMHEWENQQIRKGVTGAQLVHAQHETVLSRFMIKPATNSGADGAGAFDLDMDPVQPSTATLLEQAYAKTNLDKNTVMAATIRATLNKTKREKTKAAALRTPQEMRSSIVMRLTELRERNDEHNASITRIEAELKSLKLQQNECKQNAPTAAAKYKFYQEIKCYVNDLIDCLAAKSPMINDLEKRALQLYSKNQRYLVNRRRQDVRDQAKEMAEASKPVQAAARRTPEYEEQVRRAAEREGRRTRRRCDRERNYLLATHLDGMSSDDEIADQQQEQCLATKALIEAQAAEAFEDVNDDFCKVDLILMKFYAWRKTDMSSYQDAFVSLCLPKLLAPLVRHELLLWSPLLEEYTDIETMHWYQACMLYACQPNETVEQLKLDPDLNLVPSLIEKIVLPKVNSLVAECWDPLSTTQTLRLVGFINRLTREFPLSSSSKQLKKLFESIMERMRLALENDVFIPIFPKQVQEAKGSFFQRQFCSGLKLFRNFLSWQGILADKPLRELAIGALLNRYLLMAMRVCTPNDAISKVSIIVNTLPTVWLLTNSDTLKNLEVFISYIRQTLDNCDATNPLLMQSCDKAKQILQRLHSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00553721;
90% Identity: iTF_00599572;
80% Identity: -