Dsta015884.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila stalkeri
Gene Symbol
PAXBP1
Assembly
GCA_035047405.1
Location
JAWNPR010000142.1:28927656-28931449[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-30 3.1e-26 92.7 1.7 4 272 655 862 652 864 0.94

Sequence Information

Coding Sequence
ATGTCGCTTTTTCGCAAGCCCAAGAAAATACAGCGACGGGTTTTCTCCAGCAATGCAGACGAGGATGAGGATGTGTCGGCTGTGGACATGCATGGAGATTTGGAAACGCCCCCACCCCCGCCGCCAATAATCTCCTCATCCGGTAAACGTGACAGAGATAAAAGCAAGAAAACAATCCGACAGCCCGAGGACAGTGGAGCAATGTCTGGCGTAGCCACCGTCCAACACAAACCAAAGGCTCTTCTCAGCTTTGCTGACGATGAGGACGATGGAGAAGTGTTTCAAGTGCGCAAGTCATCGCACAGCAAGAAAGTAATGCGAATGCTGGACAAGGAGCGTCGCAAAAAGAAGCGCGAGGAACGAGCGGAAATAACCGGACACAGCGGACATCTTGGTTATGAGAATGGTAGTAATACACAGAATTTAGAGTCCTCAAGTGCCACctcggctttggctttggcttcggCTTCCGGTTCTGGTGTTGCTGGCACAGTCAATCTCTCTAGTAGATATAAAAGTACTTCGATAGCTAGCGACAATGCGAGCAtgcaaagtaaaagtaaaaagtgtGATAATGATATGATCCAAACTGAAATACGCACAGACGACTTTGTGCTTGTGGTCAAGAAATCAGAAACTCCAGATGTGCTGTTAAATGGACGCGCCGCACTTTGCGCTGGTCGCGACGATATGAGCGATGATGATGAATTTGATGATAGGGAGAACGATAAGACGCGGCATCGATTCTCAAAGCCGGAGCACTTGAAGCAAATGCTAGAGAGCGGCTCCATACCGGATGCTGCAATGATACATGCGGCACGAAAACGTAGACAGCGGGCCAGGGAGCAAGgAGCTATTGATTACATACCAATCGAGGAGCCAAAGGAAACGCCAAAGCTGAGCACACGTTTGCCGCGCGAGGATGTTGAGGGCGATCAGTCGGACGATGAGGAGCGCATGGATATGAACGACATAACGGGTCGCAAGGAGCGTGAAGAGCGGCGTGAACAATTCTATGCCGTTGAGAATGATTTAACTGAGGAAGATTCTGATCGGGAAATGCACGAATGGGAGAATCAGCAAATACGAAAGGGCGTCACTGGAGCTCAGCTTGTTCACGCTCAGCATGAGACAGTCCTTTCGCGCTTCATGATCAAGCCAGCTTCGAACAGCGGAGCAGATGATGGAGGGTttgatatggatatggatccAGTGCAGCCATCGACAGCAACATTGCTGGAGCAGGCCTATGCGAAGACCAACCTAGACAAAAATTCTATAATGGCAGCCACTATTCGTGCCTCCCTTAACAAGGCCAAGCGAGAGAAAACGAAGGCAACCGCGCTGCGTACCCCACAGGAGATGCGTTCTACAATTGTAATGCGTCTCACAGAACTCCGAGAGCGAAACGAAGAACATAATGTGAGCATTACGCGCATCGAGGCGGAGCTGAAATCTTTGAAGCTGCAACAGAACGAGTGTAAACAGAATGCTCCCACTGCGGCggccaaatataaattttatcagGAGATTAAATGCTATGTGAAGGATTTGATAGAGTGTCTGGCGGCTAAATCACCGTTAATAAATGATCTGGAGAAACGCGCTCTTCAGCTGTACAGTAAAAATCAACGTTATTTGGTTAACCGAAGGCGGCAGGATGTCCGCGATCAGGCCAAGGAAATGGCAGAGGCTGCAAAACCTGTGTTAGCGGCAGCACGTCGAACTCCAGAATACGAAGAGCAAGTACGTCGAGCGGCTGAGCGAGAAGGACGACGCACGCGTCGACGATGCGAACGTGAACGAAACTATTTGCTAGCTACTCATCTGGATGGTATGTCTAGCGATGACGAGATTGCCGATCAACAGCAGGAACAATGCGTAGCAACGAAGGCGTTGATCGAAACGCAAGCGGCCGAGGCCTTTGAAGACGTCAACGATGATTTCTGCAAGATTGATCTGATACTCATAAAGTTCTATGCATGGCGTAAAACGGACATGAGTTCGTATCAGGATGCTTTTGTCAGTCTCTGTCTGCCGAAGTTGTTGGCACCACTGGTTCGTCACGAGCTCCTGCTCTGGTCACCATTGCTGGAGGAATATACAGATATTGAGACAATGCAATGGTATCAAGCCTGCATGCTCTACGCCTGCCAGCCAAATGAAACCGTTGAACAACTCAAACAGGATCCAGACCTTAATCTTGTGCCTTCGCTTATAGAAAAGATTGTGTTGCCCAAAGTGAATTCTCTGGTCGCGGAATGCTGGGATCCATTATCCACGACACAAACGCTTCGTCTTGTCGGCTTCATCAATCGGCTAACTCGCGAATTCCCGCTCAGTAGCAGCAATAAGCAACTGAAAAAGCTGTTTGAGTCAATTATGGAACGTATGCGACTCGCACTCGAAAATGATGTTTTCATACCCATCTTTCCTAAACAAGTGCAAGAGGCCAAGGGGTCGTTCTTTCAGCGTCAGTTCTGCAGCGGTCTTAAGCTGTTTCGCAACTTTCTCAGCTGGCAAGGCATACTGGCAGACAAACCCTTAAGAGAGCTAGCTATTGGAGCTCTGTTGAATCGCTATCTACTAATGGCTATGCGTGTGTGCACACCAAATGATGCTATTAGCAAAGTCTCGATAATAGTGAATACCCTTCCTACGGTTTGGCTGCTGACCAATAGCGATACGCTAAAGAATTTGGAGGTATTCATCAGCTATATACGACAAACTTTGGACAATTGTGATGCAACTAACCCACTccttatgcaATCCTGCGAAAAGGCCAGGCAGATACTACAAAGACTAcatagtttataa
Protein Sequence
MSLFRKPKKIQRRVFSSNADEDEDVSAVDMHGDLETPPPPPPIISSSGKRDRDKSKKTIRQPEDSGAMSGVATVQHKPKALLSFADDEDDGEVFQVRKSSHSKKVMRMLDKERRKKKREERAEITGHSGHLGYENGSNTQNLESSSATSALALASASGSGVAGTVNLSSRYKSTSIASDNASMQSKSKKCDNDMIQTEIRTDDFVLVVKKSETPDVLLNGRAALCAGRDDMSDDDEFDDRENDKTRHRFSKPEHLKQMLESGSIPDAAMIHAARKRRQRAREQGAIDYIPIEEPKETPKLSTRLPREDVEGDQSDDEERMDMNDITGRKEREERREQFYAVENDLTEEDSDREMHEWENQQIRKGVTGAQLVHAQHETVLSRFMIKPASNSGADDGGFDMDMDPVQPSTATLLEQAYAKTNLDKNSIMAATIRASLNKAKREKTKATALRTPQEMRSTIVMRLTELRERNEEHNVSITRIEAELKSLKLQQNECKQNAPTAAAKYKFYQEIKCYVKDLIECLAAKSPLINDLEKRALQLYSKNQRYLVNRRRQDVRDQAKEMAEAAKPVLAAARRTPEYEEQVRRAAEREGRRTRRRCERERNYLLATHLDGMSSDDEIADQQQEQCVATKALIETQAAEAFEDVNDDFCKIDLILIKFYAWRKTDMSSYQDAFVSLCLPKLLAPLVRHELLLWSPLLEEYTDIETMQWYQACMLYACQPNETVEQLKQDPDLNLVPSLIEKIVLPKVNSLVAECWDPLSTTQTLRLVGFINRLTREFPLSSSNKQLKKLFESIMERMRLALENDVFIPIFPKQVQEAKGSFFQRQFCSGLKLFRNFLSWQGILADKPLRELAIGALLNRYLLMAMRVCTPNDAISKVSIIVNTLPTVWLLTNSDTLKNLEVFISYIRQTLDNCDATNPLLMQSCEKARQILQRLHSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00553721;
90% Identity
iTF_00493639; iTF_00519912; iTF_00502514; iTF_00509806; iTF_00551577; iTF_00476614; iTF_00554375; iTF_00540358; iTF_00479475; iTF_00473052; iTF_00532361; iTF_00545229; iTF_00544482; iTF_00572589; iTF_00568241; iTF_00546644; iTF_00559478; iTF_00516251; iTF_00573308;
80% Identity
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