Dtes008367.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila testacea
Gene Symbol
Paxbp1
Assembly
GCA_035043265.1
Location
JAWNND010000521.1:947418-951561[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-28 1.8e-24 87.0 0.7 4 272 638 845 635 847 0.94

Sequence Information

Coding Sequence
ATGTCGCTATTTCGCAAACCGAAGAAAATACAGCGACGGGTATTCTCCAGCAATGCGGACGAGGACGACAACGCATCGGCCATGGACGTTGATGGGGGCTTGGAAACACCCCCTCCGCCAATAATTTCGCTATCCGGCAAGCGggataaagaaaaaaacaaaaaatctattaaaCAATCGGATGACAATGGAGTAACAACCGGTAACAACAAACCCAAGGCATTACTTAGTTTTGCTGATGATGAGGACGATGGGGAGGTGTTTCAAGTGCGCAAATCGTCGCACAGCAAGAAAGTCATGCGAATGTTGGACAAGGAGCGACGTAAGAAGAAGCGCGAGGAGCGAGCGGAACACACTGGACACAGCGGGCAGATGGGTTATGAGAATGGTAGTACTGCACAGCATTTAGAGTCGTCCAGTGTCACTGCTTCAGGTGCTGGTATTGCCAATTCTAGTAGATATAAAAGTACGTCCATAGCGAGCGACAATGCAAGCGtacaaagtaaaagtaaaaagtgtGATAATGATATGATCCAAACCGAAATACGCACAGACGACTTTGTGCTTGTGGTCAAGAAGTCAGAAACTCCTGATGCGGTTCTAAATGGTCGTGCCGCACTTTGTGCTGGTCGAGATGATATGAGCGACGATGAACACCTAGACGATAGAGACAGTGATAAGGCGCGCCACCGTTTCTCAAAGCCCGAACACTTAAAGCAAATGCTGGAAAGTGGTTCAATTCCGGATGCAGCTATGATACATGCGGCACGTAAACGTAGACAGCGAGCCAGAGAGCAAGGTGCCGGAGACTACATACCAATAGAGGAGCCCAAGGAGCCACCGAAGCTTAGCACGCGTTTGCCACGTGAAGATGTCGAGGGAGATCAATCGGACGATGAGGAGCGCATGGATATGAACGACATAACGGGTCGAAAGGAGCGCGAAGAGCGCCGCGAACAGTTTTATGCCGTTGAGAATGATTTAACCGAGGAAGATTCGGATCGCGAAATGCATGAGTGGGAGAATCAACAGATACGTAAGGGCGTCACTGGCGCTCAGTTAGTCCACGCACAGCATGAAACGGTATTGTCGCGTTTCATGATCAAGCCAGCAGCTCCCAGCGGAAGTGGAACAATGGAACTGGAGGATGCGGTGGGACAGGCGCCGCCATCGACCTCAACATTGCTAGAACAGGCCTACGCAAGGACCACCTTTGACAAAAGCAGCACTTTGGCATCGGTGATGAGATCAAGTTTTCCTAAGCCCAAAAAAGAGAAAGCTAAAGCGACAGCTCTTCGAACGCCTCAGGAAATGCGGACTGCCATCACAACACGGCTCAATGAATTGCAGGAGCGCAACGATGATCACAGTGCCAGTATAGCACGTATTACAGCCGAATTAAAGTCATTGAAACTGCAACAACTCGAGTGTCAACAGAACGCTCCAACGGCAGCTGCAAAAtacaagttttatcaagaagTCAAGTGTTATGCTAACGATTTAGTTGATTGCCTCGCAGCGAAATCACCTTATATAAACGAACTGGAGAAACGGGCTCTGCAGCAATACGGCAAAAGTCAACGTTATCTGGTCAATCGACGTCGACAGGATGTGCGCGATCAGGCCAAGGAGATGGCGGAAGCAACAAAAGCAATATCAGCTGCCGCACGCCGAACACCGGAATACGAGGAGCAAGTGCGTCGGGCTGCTGAACGGGAGGGTCGTCGCACACGTCGACGTTGTGAACGAGAGCGCAACGATTTATTATCCTCCCATTTGGATGGCATGTCTAGCGATGATGAGATTGCCgatcaacaacaagaacagtgTGTGGCGGCTTCAGCACAAATTgaaacagaagcagcagaagcTTTCGAAGATGTCACAGACGATTTCTGCAAAATTGATCTGATACTTGTAAAGTTTTATGCTTGGCGCAAAACGGATATGAATTCATATCAGGATGCCTTTGTTAGTCTGTGTCTGCCCAAATTGCTTGCGCCAATTGTGCGTCACGAGCTGTTATTATGGTCACCCCTCCTTGAAGAGTATACGGATATTGAAACAATGCAATGGTATCAAGCTTGCATGCTGTATGCTTTCCAGCCGGATGAAACCGTTGAGCGTCTGAAACAGGATCCGGATGTTAATCTAGTGCCGTCGCTCATAGAAAAGATTGTGCTTCCCAAAGTGAACTctcTGGTTACAGAATGCTGGGATCCCCTGTCAACGACGCAAACATTGCGTCTTATTGGATTTATCAATCGCTTGGGTCGCGAATTTCCActtcacagcagcaacaagcaacTGAGAAAGCTGTTTGAATCAATTATGGAGCGAATGCGTCTAGCTCTCGAAAATGATGTATTTATACCCATATTTCCAAAACAggTGCAAGAGGCCAAGGGATCCTTTTTTCAGCGTCAGTTTTGTAGTGGTCTCAAACTATTTCGAAATTTTCTTAGCTGGCAGGGTATTCTGGCAGACAAACCATTGCGGGAACTAGCCATAGGAGCACTCCTCAATCGCTATCTCCTTTTAGCAATGCGCGTGTGTGCACCGAATGATGCCATTAGCAAGGCTTATATTATTGTGAATACCCTACCAACTGTTTGGTTACTGCCTAACAGCGATACGCTAAAGAATTTGGAGTTATTCATTAACTATATACGACAAACGTTGGAAAATTGTGATGCAAACAATCCactgtatatgcAATCCTGTGAGAAAGCTAAGCAAATACTACAAAGACTACATAGTTTATAA
Protein Sequence
MSLFRKPKKIQRRVFSSNADEDDNASAMDVDGGLETPPPPIISLSGKRDKEKNKKSIKQSDDNGVTTGNNKPKALLSFADDEDDGEVFQVRKSSHSKKVMRMLDKERRKKKREERAEHTGHSGQMGYENGSTAQHLESSSVTASGAGIANSSRYKSTSIASDNASVQSKSKKCDNDMIQTEIRTDDFVLVVKKSETPDAVLNGRAALCAGRDDMSDDEHLDDRDSDKARHRFSKPEHLKQMLESGSIPDAAMIHAARKRRQRAREQGAGDYIPIEEPKEPPKLSTRLPREDVEGDQSDDEERMDMNDITGRKEREERREQFYAVENDLTEEDSDREMHEWENQQIRKGVTGAQLVHAQHETVLSRFMIKPAAPSGSGTMELEDAVGQAPPSTSTLLEQAYARTTFDKSSTLASVMRSSFPKPKKEKAKATALRTPQEMRTAITTRLNELQERNDDHSASIARITAELKSLKLQQLECQQNAPTAAAKYKFYQEVKCYANDLVDCLAAKSPYINELEKRALQQYGKSQRYLVNRRRQDVRDQAKEMAEATKAISAAARRTPEYEEQVRRAAEREGRRTRRRCERERNDLLSSHLDGMSSDDEIADQQQEQCVAASAQIETEAAEAFEDVTDDFCKIDLILVKFYAWRKTDMNSYQDAFVSLCLPKLLAPIVRHELLLWSPLLEEYTDIETMQWYQACMLYAFQPDETVERLKQDPDVNLVPSLIEKIVLPKVNSLVTECWDPLSTTQTLRLIGFINRLGREFPLHSSNKQLRKLFESIMERMRLALENDVFIPIFPKQVQEAKGSFFQRQFCSGLKLFRNFLSWQGILADKPLRELAIGALLNRYLLLAMRVCAPNDAISKAYIIVNTLPTVWLLPNSDTLKNLELFINYIRQTLENCDANNPLYMQSCEKAKQILQRLHSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00553721;
90% Identity
iTF_00557907; iTF_00583673; iTF_00610641; iTF_00528796; iTF_00585189; iTF_00537503; iTF_00510534; iTF_00585959; iTF_00506856; iTF_00470862; iTF_00568969; iTF_00478715; iTF_00519153; iTF_00575574; iTF_00522950; iTF_00601784; iTF_00533793;
80% Identity
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