Dmal005523.1
Basic Information
- Insect
- Drosophila malerkotliana
- Gene Symbol
- retn
- Assembly
- GCA_018153235.1
- Location
- JAECXV010000075.1:13710379-13722808[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-26 7.6e-23 80.6 0.0 2 89 299 384 298 384 0.96
Sequence Information
- Coding Sequence
- ATGTACACACACTCGCAACATGCGCAGAGTGGACTAACCAGAGGTGGCCCCATCCCCAGCGAGGTGTGGTCATCACACGGTGATCGAACCGACGACGAGATGCGTGACTGCGATTCCGTGGACGGAGAACATCACCAGCTGAGCGCCAAGGCTGCGATCGCAGCTCGCCTAAGTCACACAGTTTCCGGCGGAGGTGGAAATTTCGCCAGTCCCGAGCCCCAGACGGACTTGCCCCTCAGCCATCACCATCAACTGCCGCCGAATCATCCGCTAAACGCTCTGGGCAGCTTCATGGGCATCGGTAGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTCGAGAAGCTCAAGATGCAGGTCCGCGACATGAAAGTGGGACTGATGGAACAGGACTATGCAGCCCATGCTGCGGCATTTGGAGCCAATATGCTGCCCACAACGATTAGCTCCGGATTCCCGCTACCCCATAACTCGGTGGCAGCCGCAGCGGCAGCAGCTTCCTTTGGCCACGTTACCTCGGCGCCCAGCAGCGGTGGCGGCTACAACAACAACGGCAGCGGTGTCGGCACCAACACAACCCCCAGCTCGAACAACAACTCGGCGACAAATGGCGGCAATTCCGGTGCTGGAGGAGCAGGAGCGGGAGGCGGAACCGGCGGAGGAGGAGGAGGTGGAGGGGGAGGCGGAGTGGGTGGCCATCCGTTCTCATTCGCATCCCCCTCGGCAGCGCCCAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCATCCAATTCATCCCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAGATCAATGACGACCCCAAACGCAAGGAGTTCCTCGACGATTTATTCTCGTTTATGCAAAAGCGCGGAACGCCGATCAATCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTCTATGAGCTGTACAATCTGGTAATAGCCCGCGGCGGGCTGGTGGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGCATCTGCCCTCGAGCATCACCAGTGCGGCCTTTACCCTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACCCCAGCGGAGCTGCAGGCGGCCATCGATGGCAACCGGCGGGAAGGACGCCGCTCCAGCTACGGCCAGTACGAAGCCATGCACAATCAGATGCCATTGACCCCTATTTCGCGACCCTCTCTGCCTGGGGGCATGCAACAGATGTCACCGCTGGCCCTCGTCACCCATGCCGCGGTGGCCAACAACCAACAGGCCCAGGCTGCCGCCGCCGCTGCTGCCGCCCATCATCGGCTGATGGGTGCCCCGGCTTTTGGCCAGATGCCCAACCTGGTCAAGCAGGAGATCGAGAGCCGTATGATGGAGTATCTGCAGCTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCCAGAGCCCGGATCTGAGCAAGCACGACGCTCTCAGCGCTCAGGTGGCCTTGTGGCGCATGTACCACAACAACAACAGTCCGCCGGGATCAGCCCACACCTCCCCACAGCAACGCGAAGCTTTGAACCTCTCCGATTCCCCACCAAATCTCACTAACATCAAACGGGAACGGGAGCGTGAACCCACTCCGGAGCCCGTGGAGCAGGATGATGGTCCCCATCAGCCCCCGCCGGCCAAGCGCGTGGGCAGTGGCCTCCTGCCGCCCGGGTTTCCCGCCAACTTCTATCTGAATCCACACAACATGGCCGCCGTGGCAGCGGCTGCGGGCTTCCATCACCAGGCCAGCCACCAGGAGCAGGATGCTGGCTCTGAGGGCGAGCCGGAAGATGATTACGGACACAATGAGCACAACACAACGGGCAACTCCTCGTCCATGCACGATGACAGCGAACAGCAGCCAATGAATGGACACCATCACAGCCACCACCATCATCATCAGAACCACCAGCTGGACAAGTCCGATGATTCGGCCATCGAGAACTCGCCCAGCACATCCAACACCACTGCTTCGGTGGGAAACCGTCACAGTTCGCCCGTTTCCACCAAAAAGAAGGGCAATGGAAAGAACCAGGGCAGCGGATCGGGAGAGGAGAAGAGCTCGTCTGGGGTGAAACTGAATCCTTTGGAGACTCTGAGCCTGCTTTCGGGCATGCAGTTCCAAGTGGCCAGAAATGGAACTGGCGAGAATGGCGAACAACAACTGATTGTCAACCTGGAGCTGAATGGCATCAAGTACTCGGGAGTCCTAGTGGCCAATGTGCCCAATCTCGGCCAAATCGAGACAAGGACCAGTTCCCCATGCCGCCCAGAGGCTTCAGCCCATCAGGAGCAGTGCGAGCTGCCGGAGGAGGAGGATGACGAGGAGCACGAGGGCCAGGAGGCAAAGTCCTCAACTGAAGAGGATGCCCATCAATCGCCGGCTAAGCAGGCGGCGGAGCATGAACAGGATGGCCAGGACCAGGACATGGAGGGCAGCAGCAGCGGCAGTGCAACGGCGGCCATTGTCAACGGGGGTGCCAGTGTGGGGATGCCCCTGCTGAAGGATGCTGTGGTCAGCTAG
- Protein Sequence
- MYTHSQHAQSGLTRGGPIPSEVWSSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTDLPLSHHHQLPPNHPLNALGSFMGIGSLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAHAAAFGANMLPTTISSGFPLPHNSVAAAAAAASFGHVTSAPSSGGGYNNNGSGVGTNTTPSSNNNSATNGGNSGAGGAGAGGGTGGGGGGGGGGGVGGHPFSFASPSAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQSPDLSKHDALSAQVALWRMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDGPHQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQASHQEQDAGSEGEPEDDYGHNEHNTTGNSSSMHDDSEQQPMNGHHHSHHHHHQNHQLDKSDDSAIENSPSTSNTTASVGNRHSSPVSTKKKGNGKNQGSGSGEEKSSSGVKLNPLETLSLLSGMQFQVARNGTGENGEQQLIVNLELNGIKYSGVLVANVPNLGQIETRTSSPCRPEASAHQEQCELPEEEDDEEHEGQEAKSSTEEDAHQSPAKQAAEHEQDGQDQDMEGSSSGSATAAIVNGGASVGMPLLKDAVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00565872; iTF_00615369; iTF_00503780; iTF_00545755; iTF_00477130; iTF_00511789; iTF_00529348; iTF_00487791; iTF_00475728; iTF_00587922; iTF_00481337; iTF_00579772; iTF_00550045;
- 90% Identity
- iTF_00615369;
- 80% Identity
- -