Dmon013392.2
Basic Information
- Insect
- Drosophila monieri
- Gene Symbol
- retn
- Assembly
- GCA_035047585.1
- Location
- JAWNPJ010000095.1:1375897-1395846[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-26 9.2e-23 80.6 0.0 2 89 301 386 300 386 0.96 2 2 4.9 1.1e+04 -3.0 0.3 14 18 546 550 522 582 0.50
Sequence Information
- Coding Sequence
- ATGCAACTGCGAGTGCACAACCCTACTATGGATTGTAGCGGCCGTTCAAACAGCAACATTGAACGTGATTCCGATTTGGGAGACGATTTGTCGCACGGGGATCGAACCGACGACGAGATGCGTGACTGCGATTCCGTGGACGGAGAACATCACCAGTTGAGCGCCAAGGCGGCGATCGCCGCTCGCTTAAGTCACACAGTTTCCGGCGGAGGTGGAAGCTTCGCGAGCCCCGAACCCCAAACGGACTTGCCCCTCAGCCATCACCACCAGCTGCCGCCGAATCATCCGCTAAACGCTCTGGGCAGCTTCATGGGCATCGGTAGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTCGAAAAGCTCAAGATGCAAGTCCGCGACATGAAAGTGGGACTGATGGAACAGGACTATGCAGCCCATGCCGCGGCATTTGGGGCCAATATGCTGCCCACAACAATTAGCTCGGGATTCCCGCTACCCCACAACTCGGTGGCTGCCGCCGCGGCAGCAGCTTCCTTTGGCCACGTTACCTCGGCGCCCAGCAGCGGTGGCggctacaacaacaacggcagcGGAGGTGGCGGCACCAACACAACACCCAGCTCGAACAACAACTCGGCGACAAATGGCGGCAATTCCGGTACTGGAGgcacaggagcaggaggagccgTCGGAGGAGGGGGAGGCGGAGTGGGTGGCCATCCGTTCTCGTTTGCATCCCCCTCGGCAGCGCCCAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCATCCAATTCATCCCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGACGACCCCAAGCGCAAGGAGTTCCTCGACGATTTGTTCTCGTTTATGCAAAAGCGCGGAACGCCGATCAATCGACTGCCCATAATGGCCAAATCGGTGCTGGATCTCTATGAGCTGTACAATCTGGTAATAGCCCGCGGCGGACTGGTGGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGggcctgcatctgccgtcgaGCATCACCAGTGCGGCCTTTACCCTGCGCACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACCCCAGCGGAGCTGCAGGCGGCCATCGATGGCAACCGGCGGGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCATTGACACCTATTTCGCGACCCTCTCTGCCTGGAGGCATGCAACAAATGTCACCCCTGGCCCTCGTTACTCATGCCGCGGTGGCCAACAACCAGCAGGCCCAAGCCGCCgcagccgctgctgccgcccaCCATCGATTGATGGGTGCCCCGGCTTTTGGCCAGATGCCCAACCTGGTCAAGCAGGAGATCGAGAGCCGAATGATGGAGTATCTGCAGCTGATTCAGGCCAAGAAGGAGCAGGGCCTGCCGCCTGTCCTGGGCGCTGGCCATCCGCATCAGcagcaccaacagcagcagcaccagcaacagcaggctCAGCAACAGGCTCAGCAACAGTCCCATcacctgcagcagcagcaacagcaacagcagcgtcAGCGGTCCCAGAGTCCGGATTTGAGCAAGCACGACGCTCTCAGCGCTCAGGTGGCTTTGTGGCGCATgtaccacaacaacaacagtccGCCGGGATCAGCACACACCTCCCCTCAGCAACGCGAAGCTTTGAACCTCTCGGATTCCCCACCAAATCTCACTAACATCAAACGGGAACGGGAGCGTGAACCCACTCCGGAGCCGGTGGAGCAGGATGATGGACCCCATCAGCCCCCGCCGGCCAAGCGCGTGGGCAGTGGCCTCCTGCCGCCCGGGTTCCCCGCCAACTTCTATCTGAATCCACACAACATGGCCGCAGTGGCAGCGGCTGCGGGATTCCACCATCAGGCCAGCCACCAGGAGCAGGATGCCGCTTCTGAGGGCGAGCCGGAAGATGATTACGGACACAATGAGCACAACACAACGGGCAACTCCTCGTCCATGCACGATGACAGCGAACAGCAGCCGATGAATGGACATCATCACAGccaccatcaccatcatcaGAACCACCAGCTGGACAAGTCGGATGATTCGGCCATCGAGAACTCGCCCAGCACATCGAACACCACTGCTTCAGTGGGTCATCGCCACAGTTCGCCCGTTTCCACCAAAAAGAAGAGCAGCGGCAAGAACCAGGGCAGCGGATCGGGAGAGGAGAAGAGCTCCTCGGAAGTGAAATTGAATCCTTTGGAGACTCTGAGCCTGCTTTCGGGCATGCAGTTCCAAGTGGCCAGAAATGGAACTGGCGAGAATGGCGAACAACAACTGATTGTCAACCTGGAGCTGAATGGCATCAAGTACTCCGGAGTCCTGGTGGCCAATGTGCCCAATCTCGGCCAAGTCGAGACAAGGACCAGTTCACCATGCCGACCAGAAGCTTCGGCCATCCAGGAGCAGTGCGAGttgccggaggaggaggaagaggaggaacACGAGGGCCAGGAAGCAAAGTCCTCAACTGAAGAGGATGCCCATCAATCGCCGGCTAAGCAGGCGGCGGTCCATGAACAGGATGGCCAGGACCAGGACATGGAGAGCGGCAGCAGTGCAACGGCGGCCATTGTCAACGGGGGTGCTGCCAGTGTGGGGATGCCCTTGCTGAAGGATGCTGTGGTCAGCTAG
- Protein Sequence
- MQLRVHNPTMDCSGRSNSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGSFASPEPQTDLPLSHHHQLPPNHPLNALGSFMGIGSLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAHAAAFGANMLPTTISSGFPLPHNSVAAAAAAASFGHVTSAPSSGGGYNNNGSGGGGTNTTPSSNNNSATNGGNSGTGGTGAGGAVGGGGGGVGGHPFSFASPSAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGLPPVLGAGHPHQQHQQQQHQQQQAQQQAQQQSHHLQQQQQQQQRQRSQSPDLSKHDALSAQVALWRMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDGPHQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQASHQEQDAASEGEPEDDYGHNEHNTTGNSSSMHDDSEQQPMNGHHHSHHHHHQNHQLDKSDDSAIENSPSTSNTTASVGHRHSSPVSTKKKSSGKNQGSGSGEEKSSSEVKLNPLETLSLLSGMQFQVARNGTGENGEQQLIVNLELNGIKYSGVLVANVPNLGQVETRTSSPCRPEASAIQEQCELPEEEEEEEHEGQEAKSSTEEDAHQSPAKQAAVHEQDGQDQDMESGSSATAAIVNGGAASVGMPLLKDAVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00538748;
- 90% Identity
- iTF_00615369;
- 80% Identity
- -