Drho006154.1
Basic Information
- Insect
- Drosophila rhopaloa
- Gene Symbol
- retn
- Assembly
- GCA_018152115.1
- Location
- JAECXI010000115.1:8357425-8383706[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-26 8e-23 80.6 0.0 2 89 298 383 297 383 0.96
Sequence Information
- Coding Sequence
- ATGCAACTGCGAGTGCACCCTACTATGGACTGTAGCGGTCGTTCAACCAGCAATATTGAACGCGATTCCGATCTGGGAGACGATTTGTCACATGGTGATCGAACGGACGACGAGATGCGCGACTGCGACTCCGTGGACGGGGAGCACCATCAGCTGAGCGCCAAGGCGGCGATTGCGGCCCGCTTGAGTCACACAGTTTCCGGCGGAGGAGGAGGCAACTTCGCCAGTCCCGAGCCACAGACCGAGTTGCCCCTGAGCCATCACCATCAACTGCCGCCAAATCACCCGCTCAACGCTCTGGGCAGCTTCATGGGCATCGGTGGTCTACACAGCATTCCAAATCTGCAGCACAGCGACGTGCTCGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGCCTGATGGAACAGGATTACGCGGCCGCAGCTCATGCCGCTGCTTTTGGGGCCAATATGCTGCCCACGACGATCAGCTCGGGATTCCCGCTGCCCCACAATTCGGTGGCTGCGGCGGCGGCAGCTGCCTCCTTTGGCCACGTGACCTCGACACCGAGTGGTGGGAATGGGGGCAGCTACAACGGTGGCACCAACACAACGCCCAGCTCCAACAGCAATGCGGCCACCAATGGGGGTGGTAATAGTGGACCCGGCGGAACCGGAGGATCCGGCGGGGGAGGAGGTGGAGGAGTTGGTAGCCACCAGTTCTCGTTTGCATCCCCCACAGCAGCGCCGAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCCTCCAATTCATCCCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTTCAAACAAGTCAGACAGCTCTATGAAATCAATGACGACCCTAAGCGCAAAGAGTTCCTGGACGATTTGTTCTCGTTTATGCAAAAGCGCGGTACGCCGATCAATCGACTGCCGATTATGGCCAAATCAGTGCTAGATTTGTATGAGCTGTACAATTTGGTGATAGCCCGCGGCGGTTTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCATCTGCCGTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAATCTGAGCACGCCGGCGGAGCTGCAGGCGGCCATCGATGGGAATCGCCGGGAAGGACGTCGCTCCAGCTATGGGCAATACGAGGCCATGCACAACCAGATGCCGATGACGCCCATTTCGCGACCATCTCTGCCTGGTGGCATGCAGCAAATGTCGCCTCTGGCTCTGGTCACCCATGCCGCGGTGGCCAACAATCAGCAGGCTCAGGCTGCGGCCGCTGCTGCTGCAGCTCATCATCGGCTGATGGGAGCTCCTGCCTTTGGCCAGATGCCCAATCTGGTGAAGCAGGAGATCGAGAGCCGGATGATGGAGTATCTGCAGCTGATCCAGGCCAAGAAGGAGCAGGGAATGCCGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCCAGAGTCCGGATTTGAGCAAGCACGAGGCACTCAGCGCTCAGGTGGCACTGTGGCACATGTACCACAACAACAACAGCCCACCGGGATCGGCACACACCTCGCCGCAGCAACGCGAAGCACTGAACCTGTCCGACTCGCCGCCAAATCTCACCAATATCAAGCGGGAACGCGAACGGGAACCGACGCCAGAGCCCGTGGATCAGGACGACCAGCCCCACCAGCCGCCTCCAGCGAAACGCGTGGGCAGTGGCCTCCTGCCGCCGGGCTTTCCCGCCAACTTCTACCTGAATCCCCACAACATGGCCGCAGTGGCAGCGGCAGCCGGGTTCCATCATCCATCCATGGGCCATCAGCAGGATGCCGCATCCGAGGGCGAACCGGAGGACGACTACGCCCACAACGAGCACAATACCACGGGCAACTCCTCCTCCATGCACGACGACAGTGAGCCGCAGCAGATGAACGGACACCACCACCACCACCATCACCATCAGAGCCACCAGCTGGACAAGTCCGATGACTCGGCCATCGAGAACTCGCCCACCACCTCGACCACCACCGGTGGTGGTGGTTCAGTGGGTCACCGCCACAGTTCGCCCGTTTCCACCAAGAAGAAGGGCGGTGGCAAGACCCCCAACAGCGGAAAGGATCTGCCGGCCGAGGACAAGGAAGCCTCCACTGGCAAGCTCAATCCCCTCGAGACGCTGAGCCTGCTCTCCGGCATGCAGTTTCAAGTGGCACGGAATGGAACTGGCGATAACGGCGAACCGCAGCTGATTGTTAATCTTGAACTTAATGGCATCAAGTACTCGGGTGTGCTGGTGGCCAATGTGCCGCCATCCCAAGGCGAGACAAGGACGAGCTCCCCCTGCCAGGCCAAAGCACCAATAAGCGAGGAGGAGCACGACGAGGAGGAGGAGCCGAAAGCCGCCGAGGAGGAGAACCATCGATCGCCGGTCAAGCAGGAGAGCGAGGAGGCCGACCAGGACATGGAGGCCAGCGAGGTCCTCGTGAACGGAGGCGGTGCGGCGGTGGGCGGCGGTGGTGCTGCAGGCGTGGGTATACCCCTGCTCAAGGATGCCGTGGTCAGCTAG
- Protein Sequence
- MQLRVHPTMDCSGRSTSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSGFPLPHNSVAAAAAAASFGHVTSTPSGGNGGSYNGGTNTTPSSNSNAATNGGGNSGPGGTGGSGGGGGGGVGSHQFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVDQDDQPHQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHPSMGHQQDAASEGEPEDDYAHNEHNTTGNSSSMHDDSEPQQMNGHHHHHHHHQSHQLDKSDDSAIENSPTTSTTTGGGGSVGHRHSSPVSTKKKGGGKTPNSGKDLPAEDKEASTGKLNPLETLSLLSGMQFQVARNGTGDNGEPQLIVNLELNGIKYSGVLVANVPPSQGETRTSSPCQAKAPISEEEHDEEEEPKAAEEENHRSPVKQESEEADQDMEASEVLVNGGGAAVGGGGAAGVGIPLLKDAVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00538748;
- 90% Identity
- iTF_00605357;
- 80% Identity
- -