Basic Information

Insect: Drosophila fuyamai
Gene Symbol: retn
Assembly: GCA_018153365.1
Location: JAECXW010000758.1:11512249-11526822[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3e-26 9e-23 80.5 0.0 2 89 338 423 337 423 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3e-26	9e-23	80.5	0.0	2	89	338	423	337	423	0.96

Sequence Information

Coding Sequence: ATGCAGTCGCAGTTGGTGACTTTGGCACTCTCGGCCATGCGTGGCGGACTTCTTGGCAAAGAGTCACGGCTGGCAGTGGTTCTGAGACCAAAAGACCATATCTACCAGAACAGACCAGACCAGACCAGGAGCGGAGCGGAGTGGAGTGGTCGACGACAACCGGCCCTGGAGTGGCAACAGCTCTGGGCTGATTGCCGTTTTTCACATGGTGATCGAACGGACGACGAGATGCGCGACTGCGACTCCGTGGATGGGGAGCACCATCAGCTGAGCGCCAAGGCGGCGATTGCGGCCCGCTTGAGTCACACAGTTTCCGGCGGAGGAGGCAACTTCGCCAGTCCCGAGCCACAGACCGAGCTGCCCCTGAGCCATCACCATCAACTGCCGCCAAATCACCCGCTCAACGCTCTGGGCAGCTTCATGGGCATCGGTGGTCTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTCGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGCCTGATGGAACAGGATTACGCGGCTGCAGCTCATGCCGCTGCTTTTGGGGCCAATATGCTGCCCACGACGATCAGCTCGGGATTCCCGCTGCCCCACAATTCGGTGGCTGCGGCGGCGGCAGCTGCCTCCTTTGGCCACGTGACCTCGACACCGAGTGGCGGGAATGGGGGCAGCTACAACGGGGGCACCAACACAACGCCCAACTCCAACAGCAATGCGGCCACCAATGGGGGTGGCAATAGTGGACCCGGCGGAACCGGAGGATCCGGCGGAGGAGGAGGTGGAGGAGGAGGAGGAGTGGGTGGCCACCAGTTCTCGTTTGCATCCCCCACAGCAGCGCCGAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCATCCAATTCATCCCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTTCAAACAAGTCAGACAGCTCTATGAAATCAATGACGACCCCAAGCGCAAAGAGTTCCTGGACGATTTGTTCTCGTTTATGCAAAAGCGCGGTACACCGATCAATCGACTGCCGATTATGGCCAAATCAGTGCTAGATCTGTACGAGCTGTACAATTTGGTGATAGCCCGCGGCGGTTTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCATCTGCCGTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAATCTGAGCACGCCGGCGGAACTGCAGGCGGCCATCGATGGGAATCGCCGGGAAGGACGTCGCTCCAGCTATGGGCAATACGAGGCCATGCACAACCAGATGCCGATGACGCCCATTTCGCGACCCTCTCTGCCGGGTGGCATGCAACAAATGTCGCCTCTGGCTCTGGTCACCCATGCGGCGGTGGCCAACAACCAGCAGGCTCAGGCCGCCGCTGCTGCTGCAGCAGCTCATCATCGGCTGATGGGAGCTCCGGCCTTTGGCCAGATGCCCAATCTGGTGAAGCAGGAGATCGAGAGCAGGATGATGGAGTATCTGCAGTTGATCCAGGCCAAGAAGGAGCAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACCGGGATCGGCACACACCTCGCCGCAGCAACGCGAAGCACTGAACCTGTCCGACTCGCCGCCAAATCTCACCAACATCAAACGGGAACGCGAACGGGAACCGACGCCGGAGCCCGCGGATCAGGACGACCAGCCCCATCAGCCGCCTCCAGCGAAACGCGTGGGCAGTGGCCTCCTGCCACCGGGTTTCCCCGCCAACTTCTACCTGAATCCCCACAACATGGCCGCTGTGGCAGCGGCAGCCGGGTTCCATCATCCATCCATGGGCCACCAGCAGGATGCCGCTTCCGAGGGCGAACCGGAGGATGACTACGCCCACAACGAGCACAATACCACGGGCAACTCGTCCTCCATGCACGACGACAGTGAGCCGCAACAGATGAACGGACACCACCACCACCACCATCACCATCAGAGCCACCAGCTGGACAAGTCCGATGACTCGGCCATTGAGAACTCACCCACCACCTCGACCACCACCGGTGGTGGTGGTTCAGTGGGTCACCGCCACAGTTCGCCTGTTTCCACCAAGAAGAAGGGCGGTGGCAAGACCCCCAACAGCGGCAAGGATCTGCCGGCCGAGGACAAGGAAGCCTCCACTGGCAAGCTCAATCCCCTCGAGACACTGAGCCTGCTCTCCGGCATGCAGTTTCAAGTGGCACGGAATGGAACTGGCGATAACGGCGAACCGCAGCTGATTGTTAATCTTGAACTTAATGGCATCAAGTACTCGGGTGTGCTGGTGGCCAATGTGCCGCCATCCCAAGGCGAGACAAGGACGAGCTCCCCCTGCCAGGCCAAAGCACCAATAATCGAGGAGGAGCACGACGAGGAGGAGGAGGAGGAGCCGAAAGCCGCTGAGGAGGAGAACCATCGATCGCCGGTCAAGCAGGAGAGCGAGGAGGCCGACCAGGACATGGACGCCACTGAGGTCCTTGTGAACGGAGGTGGTGCGGCGGTGGGCGGCGGTGGTGCTGCAGGCGTGGGTATACCCCTGCTTAAGGATGCCGTGGTCAGCTAG
Protein Sequence: MQSQLVTLALSAMRGGLLGKESRLAVVLRPKDHIYQNRPDQTRSGAEWSGRRQPALEWQQLWADCRFSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSGFPLPHNSVAAAAAAASFGHVTSTPSGGNGGSYNGGTNTTPNSNSNAATNGGGNSGPGGTGGSGGGGGGGGGGVGGHQFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPADQDDQPHQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHPSMGHQQDAASEGEPEDDYAHNEHNTTGNSSSMHDDSEPQQMNGHHHHHHHHQSHQLDKSDDSAIENSPTTSTTTGGGGSVGHRHSSPVSTKKKGGGKTPNSGKDLPAEDKEASTGKLNPLETLSLLSGMQFQVARNGTGDNGEPQLIVNLELNGIKYSGVLVANVPPSQGETRTSSPCQAKAPIIEEEHDEEEEEEPKAAEEENHRSPVKQESEEADQDMDATEVLVNGGGAAVGGGGAAGVGIPLLKDAVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00538748;
90% Identity: iTF_00605357;
80% Identity: -