Datr007624.2
Basic Information
- Insect
- Drosophila atripex
- Gene Symbol
- retn
- Assembly
- GCA_035045925.1
- Location
- JAWNOP010000052.1:4685268-4705870[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-26 8.7e-23 80.5 0.0 2 89 304 389 303 389 0.96 2 2 5 1.1e+04 -3.2 0.7 67 67 551 551 523 586 0.52
Sequence Information
- Coding Sequence
- atgcaaCTGCGAGTGCACAACCCTACTATGGATTGTAGCGGCCGTTCAAACAGCAACATTGAACGTGATTCCGATTTGGGAGACGATTTGTCACACGGGGATCGAACCGACGACGAGATGCGGGACTGCGATTCCGTGGACGGAGAACATCACCAGTTGAGCGCCAAGGCGGCGATCGCCGCTCGCTTAAGTCACACAGTTTCCGGCGGAGGTGGAAGCTTCGCGAGTCCCGAACCCCAAACGGACTTGCCCCTTAGCCATCATCACCAGCTACCGCCGAATCATCCGCTAAACGCTCTGGGCAGCTTCATGGGCATCGGTAGTCTACACAGCATTCCAAATCTGCAGCACAGCGACGTGCTCGAGAAGCTCAAGATGCAAGTCCGCGACATGAAAGTGGGACTGATGGAACAGGACTATGCAGCCCATGCCGCGGCATTTGGGGCCAATATGCTGCCCACGACCATTAGCTCGGGATTCCCGCTACCCCACAACTCGGTGGCTGCTGCCGCGGCAGCAGCATCCTTTGGCCACGTTACATCGGCGCCCAGCAGCGGTGGCggctacaacaacaacggcagcgGAGGTGGCGGCACCAACACAACACCCAGTTCGGCGACAAATGGCGGCAATTCCGGTACTGGAGGAACTGGAGCGGGAGGAGCCgtcggcggaggaggaggaggaggaggaggagggggaggCGGAGTAAGTGGCCATCCGTTCTCGTTTGCATCCCCCTCGGCAGCGCCCAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCATCAAATTCATCCCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAGATCAATGACGACCCCAAACGCAAGGAGTTCCTCGACGATTTATTCTCGTTTATGCAAAAGCGCGGAACGCCGATCAATCGACTGCCCATAATGGCCAAATCGGTGCTGGATCTCTATGAGCTGTACAATCTGGTAATAGCCCGCGGCGGGCTGGTCGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGggcctgcatctgccgtcgaGCATCACCAGTGCGGCCTTTACCCTGCGCACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACTCCGGCAGAGCTGCAGGCGGCCATCGATGGCAACCGGCGGGAAGGACGTCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAATCAGATGCCATTGACACCTATTTCGCGACCCTCTCTGCCGGGTGGCATGCAACAAATGTCACCGCTGGCCCTGGTTACTCATGCCGCGGTGGCCAACAACCAACAGGCCCaggctgccgccgccgctgctgccgcccaCCATCGATTGATGGGTGCCCCGGCCTTTGGCCAGATGCCCAACTTGGTCAAGCAGGAGATCGAGAGCCGAATGATGGAGTATCTGCAGCTGATTCAGGCCAAGAAGGAGCAGGGCTTGCCGCCCGTCCTGGGCGCCGGCCATCCGcatcagcagcaccagcagcaacagcaccagcaacagcaggcccagcagcagcaacaggctcAGCAACAGTCCCATcacctgcagcagcagcagcaacagcaacagcagcgccaGCGGTCCCAGAGTCCGGATTTGAGCAAGCACGACGCTCTCAGCGCTCAGGTGGCACTGTGGCGCATgtaccacaacaacaacagtccGCCGGGATCAGCCCACACCTCCCCCCAGCAACGAGAAGCTTTGAACCTCTCGGATTCCCCACCAAATCTCACTAACATCaaacgggaacgggaacgtGAACCCACTCCGGAGCCCGTGGAGCAGGATGATGGAGCCCACCAGCCCCCGCCGGCCAAACGCGTGGGCAGTGGCCTCCTGCCGCCCGGGTTCCCAGCCAACTTCTATCTGAATCCACACAACATGGCCGCAGTGGCCGCAGCTGCGGGATTCCACCACCAGGCCAGCCACCAGGAACAGGATGGCGCATCCGAGGGCGAGCCGGAAGATGATTACGGACACAATGAGCACAACACAACGGGCAACTCCTCGTCCATGCACGACGACATCGAACAGCAGCCGATGAATGGACATCATcacagccaccaccaccaccaccatcagaACCACCAGCTGGACAAGTCGGATGATTCGGCCATCGAGAACTCGCCCAGCACATCGAACACCACTGGTTCAGTGGGACATCGTCACAGTTCGCCCGTGTCCACCAAAAAGAAGAGCAATGGCAAGAACCAGGGCAGCGGATCGGTAGAGGAGAAGACCTCCTCCGGGGCGAAATTGAATCCTTTGGAGACTCTGAGCCTGCTGTCGGGCATGCAGTTCCAAGTGGCCAGAAATGGAACTGGCGAGAATGGCGAACAACAATTGATTGTCAACCTGGAGCTGAATGGCATCAAGTACTCCGGAGTCCTGGTGGCCAATGTGCCCAATCTCGGCCAAATCGAGCCAAGGACCAGTTCACCATGCCGCCCAGAAGCCACTGCCAACCAGGAGCAGTGCGAGttgccggaggaggaggaagaggaggagcaCGAGGGCCAGGAAGCAAAGTCCTCAACTGAAGAGGATGCCCATCAATCGCCGGCTAAGCAGGCGGCGGACCATGAACAGGATGCCCAGGACCAGGACATGGAGGGCGGCAGCAGTGCAACGGCGGCCATTGTCAATGGGGGTGGCAGTGTGGGGATGCCCCTGCTGAAGGATGCTGTGGTCAGCTAG
- Protein Sequence
- MQLRVHNPTMDCSGRSNSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGSFASPEPQTDLPLSHHHQLPPNHPLNALGSFMGIGSLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAHAAAFGANMLPTTISSGFPLPHNSVAAAAAAASFGHVTSAPSSGGGYNNNGSGGGGTNTTPSSATNGGNSGTGGTGAGGAVGGGGGGGGGGGGGVSGHPFSFASPSAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGLPPVLGAGHPHQQHQQQQHQQQQAQQQQQAQQQSHHLQQQQQQQQQRQRSQSPDLSKHDALSAQVALWRMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDGAHQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQASHQEQDGASEGEPEDDYGHNEHNTTGNSSSMHDDIEQQPMNGHHHSHHHHHHQNHQLDKSDDSAIENSPSTSNTTGSVGHRHSSPVSTKKKSNGKNQGSGSVEEKTSSGAKLNPLETLSLLSGMQFQVARNGTGENGEQQLIVNLELNGIKYSGVLVANVPNLGQIEPRTSSPCRPEATANQEQCELPEEEEEEEHEGQEAKSSTEEDAHQSPAKQAADHEQDAQDQDMEGGSSATAAIVNGGGSVGMPLLKDAVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00538748;
- 90% Identity
- iTF_00615369;
- 80% Identity
- -