Dano017740.2
Basic Information
- Insect
- Drosophila anomalata
- Gene Symbol
- retn
- Assembly
- GCA_035046425.1
- Location
- JAWNNY010002336.1:123755-144113[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-26 9.7e-23 80.6 0.0 2 89 301 386 300 386 0.96 2 2 4.2 1.1e+04 -2.9 0.5 14 15 548 549 521 584 0.52
Sequence Information
- Coding Sequence
- ATGCAACTGCGAGTTCACAACCCTACTATGGATTGTAGCGGCCGTTCAAACAGCAACATTGAACGTGATTCCGATTTGGGAGACGATTtgTCACACGGGGATCGAACCGACGACGAGATGCGTGATTGCGATTCCGTGGACGGGGAACATCACCAGTTGAGCGCCAAGGCGGCGATCGCCGCTCGCTTAAGTCACACGGTTTCCGGCGGAGGTGGAAGCTTCGCGAGTCCCGAACCCCAAACGGACTTGCCCCTCAGCCATCACCACCAGCTGCCGCCGAATCATCCGCTAAACGCTCTGGGCAGCTTCATGGGCATCGGTAGCCTTCACAGCATTCCAAATCTGCAGCACAGCGATGTGCTCGAAAAGCTCAAGATGCAAGTCCGCGACATGAAAGTGGGACTGATGGAACAGGACTATGCAGCCCATGCCGCGGCATTTGGGGCCAATATGCTGCCAACGACAATTAGCTCGGGATTCCCGCTACCCCACAACTCGGTGGCTGCAGCCGCGGCAGCAGCTTCCTTTGGCCACGTTACCTCGGCGCCCAGCAGCGGTGGCggctacaacaacaacggcagcggAGGTGGCGGCACCAACACAACACCCAGCTCGAATAACAACTCGGCGACAAATGGCGGCAATTCCGGAGGAACTGGAGGaacaggagctggaggagccggaggaggaggaggcggagtgGGTGGCCATCCGTTCTCATTTGCATCCCCCTCAGCAGCGCCCAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCATCGACGTCCAGCGAGGCATCAAATTCATCCCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGACGACCCCAAACGTAAGGAGTTCCTCGACGATTTATTCTCGTTTATGCAAAAGCGCGGAACGCCGATCAATCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTCTATGAGCTGTACAATCTGGTAATAGCCCGCGGCGGACTGGTCGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGggcctgcatctgccgtcgaGCATCACTAGTGCGGCCTTTACCCTGCGGACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACCCCAGCGGAGCTGCAGGCTGCCATCGATGGCAACCGGCGGGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAACCAGATGCCATTGACACCTATTTCGCGACCCTCTCTGCCCGGAGGCATGCAACAAATGTCACCGCTGGCCCTCGTTACTCATGCCGCGGTGGCCAACAACCAACAGGCCCaggctgccgccgccgctgctgccgcccaCCATCGGTTGATGGGTGCCCCGGCATTTGGCCAGATGCCCAACTTGGTCAAGCAGGAGATCGAGAGCCGGATGATGGAGTATCTTCAGCTGATTCAGGCCAAGAAGGAGCAGGGCCTGCCGCCCGTTCTGGGCGCCGGTCATCCGcatcagcagcaccagcagcagcaacaccagcaacagcaggcccagcagcagcaacaggctCAGCAACAGTCCCATcacctgcagcagcagcaacagcaacagcagcgccAGCGCTCCCAGAGTCCGGATTTGAGCAAGCACGACGCTCTCAGCGCTCAGGTGGCATTGTGGCGCATgtaccacaacaacaacagtccGCCGGGATCAGCACACACCTCCCCTCAGCAACGCGAAGCTTTGAACCTCTCGGATTCCCCACCAAATCTCACTAACATTAAACGGGAACGGGAGCGTGAACCCACTCCGGAGCCCGTGGAGCAGGATGATGGACCCCATCAGCCCCCGCCGGCCAAGCGCGTGGGCAGTGGCCTCCTGCCGCCCGGGTTCCCCGCCAACTTCTATCTGAATCCTCACAACATGGCCGCAGTGGCCGCGGCTGCGGGCTTCCATCACCAGGCCAGTCACCAGGAGCAGGATGCCGCATCCGAGGGCGAGCCGGAAGATGAGTACGGACACAATGAGCACAACACAACGGGCAACTCCTCGTCCATGCACGATGACAGCGAACAGCAGCCGATGAATGGACATCACCACAgccaccatcaccatcatcagAACCACCAGCTGGACAAGTCGGATGACTCGGCCATCGAGAACTCGCCCAGCACATCGAACACCACTGCTTCAGTGGGACATCGTCACAGTTCGCCCGTTTCCACCAAAAAGAAGAGCAGTGGAAAGAGCCAGGGCAGCGGATCGGGAGAGGAGAAGAGCTCTTCCGGGGTGAAATTGAATCCTTTGGAGACTCTGAGCCTGCTTTCGGGCATGCAGTTCCAAGTGGCCAGAAATGGAACTGGCGAGAATGGCGAACAACAACTGATTGTCAACCTGGAGCTGAATGGCATCAAGTACTCCGGAGTCCTGGTGGCCAATGTGCCCAATCTCGGCCAAATCGAGACAAGGACCAGCTCACCATGCCGCCCGGAAGCCTCAGCCAACCAGGAGCAGTGCGAAttgccggaggaggaggaagaggaggagcaCGAGGGCCAGGAGGCAAAGTCCTCAACTGAAGAGGATGCCCATCAATCGCCGGCTAAGCAGGCGGCGGAGCATGAACAGGatggccaggaccaggacaTGGAGGGCGGCAGCAGTGCAACGGCGGCCATTGTCAACGGGGGCGCCAGTGTGGGGATGCCCCTGCTGAAGGATGCTGTGGTCAGCTAG
- Protein Sequence
- MQLRVHNPTMDCSGRSNSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGSFASPEPQTDLPLSHHHQLPPNHPLNALGSFMGIGSLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAHAAAFGANMLPTTISSGFPLPHNSVAAAAAAASFGHVTSAPSSGGGYNNNGSGGGGTNTTPSSNNNSATNGGNSGGTGGTGAGGAGGGGGGVGGHPFSFASPSAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGLPPVLGAGHPHQQHQQQQHQQQQAQQQQQAQQQSHHLQQQQQQQQRQRSQSPDLSKHDALSAQVALWRMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDGPHQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQASHQEQDAASEGEPEDEYGHNEHNTTGNSSSMHDDSEQQPMNGHHHSHHHHHQNHQLDKSDDSAIENSPSTSNTTASVGHRHSSPVSTKKKSSGKSQGSGSGEEKSSSGVKLNPLETLSLLSGMQFQVARNGTGENGEQQLIVNLELNGIKYSGVLVANVPNLGQIETRTSSPCRPEASANQEQCELPEEEEEEEHEGQEAKSSTEEDAHQSPAKQAAEHEQDGQDQDMEGGSSATAAIVNGGASVGMPLLKDAVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00538748;
- 90% Identity
- iTF_00615369;
- 80% Identity
- -