Basic Information

Insect: Drosophila bipectinata
Gene Symbol: retn
Assembly: GCA_018153845.1
Location: JAECYF010000002.1:15290516-15310426[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.9e-26 7.7e-23 80.5 0.0 2 89 302 387 301 387 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.9e-26	7.7e-23	80.5	0.0	2	89	302	387	301	387	0.96

Sequence Information

Coding Sequence: ATGCAACTGCGAGTGCACAACCCTACTATGGATTGTAGCGGCCGTTCAAACAGCAACATTGAACGTGATTCCGATTTGGGAGACGATTTGTCACACGGTGATCGAACCGACGACGAGATGCGTGACTGCGATTCCGTGGACGGAGAACATCACCAGCTGAGCGCCAAGGCTGCGATCGCAGCTCGCCTAAGTCACACAGTTTCCGGTGGAGGTGGAAATTTCGCCAGTCCCGAGCCCCAGACGGACTTGCCCCTCAGCCATCACCATCAACTGCCGCCGAATCATCCGCTAAACGCTCTGGGCAGCTTCATGGGCATCGGTAGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTCGAGAAGCTCAAGATGCAGGTCCGCGACATGAAAGTGGGACTGATGGAACAGGACTATGCAGCCCATGCAGCGGCATTTGGAGCCAATATGCTGCCCACAACGATTAGCTCGGGATTCCCGCTACCCCACAACTCGGTGGCAGCCGCAGCGGCAGCAGCTTCCTTTGGCCACGTTACCTCGGCGCCCAGCAGCGGTGGCGGCTACAACAACAACGGCAGCGGTGTCGGCACCAATACAACCCCCAGCTCGAACAACAACTCGGCGACAAATGGCGGTAATTCTGGTGCTGGAGGAGCAGGAGCGGGAGGAGCCGGCGGAGGAGGAGGAGGCGGAGGCGGAGTGGGTGGCCATCCGTTCTCATTCGCATCCCCCTCGGCAGCGCCCAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCATCCAATTCATCCCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAGATCAATGACGACCCCAAACGCAAGGAGTTCCTCGACGATTTATTCTCGTTTATGCAAAAGCGCGGAACGCCGATCAATCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTCTATGAGCTGTACAATCTGGTAATAGCCCGCGGCGGGCTGGTGGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGCATCTGCCCTCGAGCATCACCAGTGCGGCCTTTACCCTGCGCACCCAATACATGAAGTATCTATACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACCCCAGCGGAGCTGCAGGCGGCCATCGATGGCAACCGGCGGGAAGGACGCCGCTCCAGCTACGGCCAGTACGAAGCCATGCACAATCAGATGCCATTGACACCTATTTCGCGACCCTCTCTGCCTGGGGGCATGCAACAGATGTCACCGCTGGCCCTCGTCACTCATGCCGCGGTGGCCAACAACCAACAGGCCCAGGCTGCCGCCGCCGCTGCTGCCGCCCACCATCGGCTGATGGGTGCCCCGGCTTTCGGCCAGATGCCCAACCTGGTCAAGCAGGAGATCGAGAGCCGTATGATGGAGTATCTGCAGCTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCAGAGTCCGGATCTGAGCAAGCACGACGCTCTCAGCGCTCAGGTGGCCTTGTGGCGCATGTACCACAACAACAACAGTCCGCCGGGATCAGCCCACACCTCCCCTCAGCAACGCGAAGCTTTGAACCTCTCCGATTCCCCACCAAATCTCACTAACATCAAACGGGAACGGGAGCGAGAACCCACTCCGGAGCCCGTGGAGCAGGATGATGGTCCTCATCAGCCACCGCCGGCCAAGCGCGTGGGCAGTGGCCTCCTGCCGCCCGGGTTTCCTGCCAACTTCTATCTGAATCCACACAACATGGCTGCAGTGGCAGCGGCTGCGGGATTCCATCACCAGGCCAGCCACCAGGAGCAGGATGCTGGCTCTGAGGGCGAGCCGGAAGATGATTACGGACACAATGAGCACAACACAACGGGCAACTCCTCGTCTATGCACGATGACAGCGAACAGCAGCCAATGAATGGACACCATCACAGCCACCACCATCATCATCAGAACCACCAGCTGGACAAGTCGGATGATTCGGCCATCGAGAACTCGCCCAGCACATCCAACACCACTGCTTCGGTGGGTCACCGTCACAGTTCGCCCGTTTCCACCAAAAAGAAGGGCAATGGAAAGAACCAGGGCAGCGGATCGGGAGAGGAGAAGAGCTCGTCTGGGGTGAAACTGAATCCTTTGGAGACTCTGAGCCTGCTTTCGGGCATGCAGTTCCAAGTGGCCAGAAATGGAACTGGCGAGAATGGCGAACAACAACTGATTGTCAACCTGGAGCTGAATGGCATCAAGTACTCGGGAGTCCTAGTGGCCAATGTGCCCAATCTCGGCCAAATCGAGACAAGGACCAGTTCCCCATGCCGCCCAGAGGCTTCAGCCCATCAGGAGCAGTGCGAGCTGCCGGAGGAGGAGGATGAGGAGGAGCACGAGGGCCAGGAGGCAAAGTCCTCAACTGAAGAGGATGCCCATCAATCGCCGGCTAAGCAGGCGGCGGAGCATGAACAGGATGGCCAGGACCAGGACATGGAGGGCAGCAGCAGCGGCAGTGCAACGGCGGCCATTGTCAACGGGGGTGGCAGTGTGGGGATGCCCCTGCTGAAGGATGCTGTGGTCAGCTAG
Protein Sequence: MQLRVHNPTMDCSGRSNSNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTDLPLSHHHQLPPNHPLNALGSFMGIGSLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAHAAAFGANMLPTTISSGFPLPHNSVAAAAAAASFGHVTSAPSSGGGYNNNGSGVGTNTTPSSNNNSATNGGNSGAGGAGAGGAGGGGGGGGGVGGHPFSFASPSAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQSPDLSKHDALSAQVALWRMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDGPHQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQASHQEQDAGSEGEPEDDYGHNEHNTTGNSSSMHDDSEQQPMNGHHHSHHHHHQNHQLDKSDDSAIENSPSTSNTTASVGHRHSSPVSTKKKGNGKNQGSGSGEEKSSSGVKLNPLETLSLLSGMQFQVARNGTGENGEQQLIVNLELNGIKYSGVLVANVPNLGQIETRTSSPCRPEASAHQEQCELPEEEDEEEHEGQEAKSSTEEDAHQSPAKQAAEHEQDGQDQDMEGSSSGSATAAIVNGGGSVGMPLLKDAVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00538748;
90% Identity: iTF_00615369;
80% Identity: -