Dlon014394.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila longiperda
Gene Symbol
nfxl1
Assembly
GCA_035042125.1
Location
JAWNLV010000172.1:3187390-3190550[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.12 1.1e+03 -0.3 0.4 4 10 156 162 155 162 0.95
2 18 6.3e-08 0.00055 19.9 15.5 1 18 170 186 170 187 0.98
3 18 2 1.8e+04 -5.1 2.0 6 10 213 217 212 217 0.78
4 18 1e-07 0.00089 19.2 18.5 1 19 223 242 223 242 0.97
5 18 1.1 1e+04 -3.3 0.9 5 10 266 271 266 271 0.92
6 18 3.8e-05 0.33 11.0 13.7 1 19 277 297 277 304 0.94
7 18 0.86 7.6e+03 -2.9 0.5 1 7 321 326 320 328 0.49
8 18 1e-07 0.00089 19.2 11.8 1 18 331 348 331 349 0.96
9 18 0.68 6e+03 -2.6 0.4 1 5 358 362 358 367 0.73
10 18 0.021 1.9e+02 2.2 15.9 1 18 383 400 383 401 0.94
11 18 3.2e-08 0.00028 20.8 14.7 1 19 410 428 404 428 0.90
12 18 0.35 3.1e+03 -1.7 1.1 6 10 456 460 455 460 0.92
13 18 8.7e-05 0.77 9.8 8.2 10 19 474 483 472 483 0.91
14 18 0.01 91 3.2 5.6 1 11 495 504 495 505 0.95
15 18 8.2e-05 0.73 9.9 2.7 1 11 570 580 570 581 0.95
16 18 0.03 2.7e+02 1.7 16.2 3 19 610 626 601 626 0.88
17 18 1.6 1.4e+04 -3.8 1.4 8 13 631 636 630 636 0.73
18 18 4.3e-07 0.0038 17.2 10.3 1 16 677 691 677 697 0.92

Sequence Information

Coding Sequence
atggaaaagtttAATAAAGCGCAGGCAAAGAATTTGGCAGCCGCAAAGAAGCTTGTGGAAGCCTACGAATCCAGCTCAGAGGATGAAGGGGAACTAGATGACAAACACATACTggATCTGGTATACAAGCATTATCAAAGCACGCCGGACAACTCGAAAAAACGCTACGACAATAATGCCAATCGTACGGCTACATTTCTGGAGAACACCCTACACTCCGGAGCAGCGACATGTCTCGTTTGCATTGGCAGCATTCGACGTGTGGAGCCGATTTGGTCATGCAAATCATGCTATTGCTTCTTCCATCTGAGGTGCATTCAGCGCTGGGCCAACGATAGCGTCATGCAAATGAAAGTCAAGGCAGAGCAGCAGAATGGGAGCCAGGGGCATTACAATCATCTCGGCGAGTTTGAATGCTTCTGCGGCAAGGAGGTGAATCCGGAGGCGCAACCATTTCTGGTGCCACATTCCTGTGGCGAAATCTGTGGCAAACTGTTGCAGCCGAAATGCGGCCACGACTGCAAGCTACTCTGTCATCCAGGCCCCTGTCCACCGTGCGCACAACTGGCGCAAAGTTCCTGCCTCTGCAGCAAGTCGCCGTCACGCTCTGTGCGCTGCATAGACAAAAATTGGCAGTGCCAGCAAAACTGCCAATCTCTATTATCGTGTGGCAAGCACAAGTGCAACCAAAAATGCCATCCACCTGGACAGTGTCCGCCCTGCAGCAGCAAGAGTTCTCAGCACTGTGATTGCCAACGTGAGCAAAAAGTTGTCAACTGTGCGGAGCCTAAATGGAAgtgtaaaaatatatgtGGCGCAGCTTTTGCTTGTGGACTGCACAACTGCGACAAGGTGTGCCATGCGGCTCCCTGTGGCGGCGGCGAGTGTCCCCTGGGCATGCGCAGTTGCCCCTGTGGGAAAAGCtTAACAACTGGCGGCTGCAGCGAGGCGCTGGAAACATGTGGCGACACCTGCCAGAAGCTGTTACGGTGTGGCAAGCACAGCTGTGCACAACGTTGCCATCGTGGTCCTTGCAACCTGTGCCTGGTTCGCACCAAGAAAAAGTGCCGTTGTGGTCTGCACGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCAACTGCGAAACCAAATGCAAACTAATGCGCGACTGCAACAAGCATGCCTGCAATCGAAAGtgctGTGGGGATCAGTGTCCGCCCTGCGAGAAGATCTGCGGCAAGCAGCTAAGCTGCAACAAGCACAAGTGTCAGTCTGTGTGCCATAATGGACCCTGTTATCCCTGCAAGCTAACATCGCAGGTCATTTGCCGCTGTGGCAAGACCCGGCGCAGTGTCCCATGTGGCAGAGAGAAAAGCGCACGCATCGCCTGCCAGGAGCTATGTCGAGTCACACCTAAATGCCACCATGCTATCAGGCATCGCTGCCACAAGGGCGAGTGTCCCCCGTGTACTCAACCATGTGGCCTGTTAAATGATACCAGCAGCTGTGGACACATCTGCAAGGCTCGCTGCCACGCAGCCATACGTGTGCTCAAGCCAACGGATACAGTGCGTCCGCATGCCAATAagTACGAATATCACGCAGAGGCGCATCCGCGTTGCGAGGAAGGTGTTAGCGTTACATGCATTGGTGGTCACGAAGTGGCCACATGGCCGTGCTGGAATTCTAAGCCGTCGTCGTGCGCCCGCAAATGTGCACGCCACTTGAAGTGCGGAAATCATAGCTGTGCGATCTTCTGTCATGCGGTGCCCAATCCCAATGatatgcagcagcaggcggGTTGTGCTCAGTGTGAGCAGGGATGCGGAATTCCACGTCCTGCCGGCTGCACACATGCCTGTGCCAAGGGTTGTCATCCGCCGCCGTGTGCGCCCTGCAGTTTTGTGATGAAGAACAAATGCCATTGTGGCCTCAATCAGGTCATCTACAAGTGTAGCGAGTTCTTTAATCTGGAGGGCTCTGTGCAGCAGATTGTGGAGCGGCGCCAGAAGCTGTGCAGTTGTGGCAATCGGTGCCTCAAgaatTTCGCTTGTGGCCATCGCTGCCTGGCCATCTGCCATGCCGGCCCGTGTCCCAATCCCGAGCTGTGCCGCAAAAAGGTGCgaattttttgtgcttgtaaGCGCATCAAGCTGGAGATAGCCTGCGACAAACATCGAGCCGGTCAAACGTCGTTGAATTGTGATCGGAGCTGCCAAGAAGAACGTACCAGGGCGGCGGCAACGGAGCAGCAGGAATTGGAACGCCGTCTGCGGCTGGAAGAGGAAAAAAATCGTCTGGAGCTGGAAAAATTCGAGAAAAAGTTTGGCAAGCGTAAGCACAAAGAGCGCAAAACACATGATGTGGAGCCAACCAAATCCAACATCGATTGGAAGCGTTTGGCCATCTGCGCACTTGCCTTTCTGGCGGTTGCCGGCGCCGTCGCCGTGGCTTACTATGCGGACAGTTAA
Protein Sequence
MEKFNKAQAKNLAAAKKLVEAYESSSEDEGELDDKHILDLVYKHYQSTPDNSKKRYDNNANRTATFLENTLHSGAATCLVCIGSIRRVEPIWSCKSCYCFFHLRCIQRWANDSVMQMKVKAEQQNGSQGHYNHLGEFECFCGKEVNPEAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAQSSCLCSKSPSRSVRCIDKNWQCQQNCQSLLSCGKHKCNQKCHPPGQCPPCSSKSSQHCDCQREQKVVNCAEPKWKCKNICGAAFACGLHNCDKVCHAAPCGGGECPLGMRSCPCGKSLTTGGCSEALETCGDTCQKLLRCGKHSCAQRCHRGPCNLCLVRTKKKCRCGLHEKELPCSKEFNCETKCKLMRDCNKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLTSQVICRCGKTRRSVPCGREKSARIACQELCRVTPKCHHAIRHRCHKGECPPCTQPCGLLNDTSSCGHICKARCHAAIRVLKPTDTVRPHANKYEYHAEAHPRCEEGVSVTCIGGHEVATWPCWNSKPSSCARKCARHLKCGNHSCAIFCHAVPNPNDMQQQAGCAQCEQGCGIPRPAGCTHACAKGCHPPPCAPCSFVMKNKCHCGLNQVIYKCSEFFNLEGSVQQIVERRQKLCSCGNRCLKNFACGHRCLAICHAGPCPNPELCRKKVRIFCACKRIKLEIACDKHRAGQTSLNCDRSCQEERTRAAATEQQELERRLRLEEEKNRLELEKFEKKFGKRKHKERKTHDVEPTKSNIDWKRLAICALAFLAVAGAVAVAYYADS