Doch008932.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila ochracea
Gene Symbol
nfxl1
Assembly
GCA_035044125.1
Location
JAWNML010000054.1:482439-485578[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 1.7e+04 -8.1 6.4 15 19 150 154 149 154 0.82
2 20 0.13 1.1e+03 -0.3 0.4 4 10 185 191 184 191 0.95
3 20 6.5e-08 0.00054 19.8 15.5 1 18 199 215 199 216 0.98
4 20 3.5e-06 0.03 14.3 20.3 1 19 252 271 252 271 0.97
5 20 1.2 9.8e+03 -3.4 0.9 5 10 295 300 295 300 0.92
6 20 0.00049 4.1 7.4 16.3 1 19 306 326 306 333 0.94
7 20 0.89 7.4e+03 -3.0 0.5 1 7 350 355 349 357 0.49
8 20 1e-07 0.00087 19.2 11.8 1 18 360 377 360 378 0.96
9 20 1.1 9.1e+03 -3.3 2.9 1 11 387 397 387 398 0.83
10 20 0.022 1.8e+02 2.2 15.9 1 18 412 429 412 430 0.94
11 20 3.4e-08 0.00028 20.7 14.7 1 19 439 457 433 457 0.90
12 20 0.37 3.1e+03 -1.8 1.1 6 10 485 489 484 489 0.92
13 20 0.00011 0.94 9.5 7.9 10 18 503 511 501 512 0.93
14 20 0.011 90 3.1 5.6 1 11 524 533 524 534 0.95
15 20 0.78 6.5e+03 -2.8 1.0 1 4 593 596 589 596 0.84
16 20 2.4e-05 0.2 11.6 2.5 1 11 599 609 599 610 0.96
17 20 0.032 2.6e+02 1.6 13.3 3 19 639 655 638 655 0.92
18 20 2 1.7e+04 -5.5 2.1 9 13 661 665 660 665 0.72
19 20 1.7e-06 0.014 15.3 12.0 1 16 706 720 706 726 0.92
20 20 0.48 4e+03 -2.1 0.3 11 16 756 761 756 762 0.80

Sequence Information

Coding Sequence
atggaaaagtttaATAAAGCGCAGGCAAAGAATTTGGCAGCCGCAAGGAAGCTTGTCGATGCATACGCATCCAGTTCAGAGGATGAGGGCGAATTGGATGAAAAACATATACTggATCTGCTCTACAAGCACTATCAAAGCACGTCGGATAACTCGAGCAAACGGAACGACAATAATGCCAATCGTACGGCTACCTTTCTGGAGAACACCCTGCACTCGGGAGCGGCAACATGTCTCATTTGCATTGGCAGCATTCGGCGCGTGGAGCCGATTTGGTCATGCAAATCATGCTATTGCTTCTTCCATCTGAGGTGCATTCAGCGCTGGGCCAATGATAGCGTCATGCAAATGAAAGTCAAGGCAGAGCAGCAGAATGGCAACCAGGGTCACTACAATCATCTCGGCGAGTTTGTGCCGCCCAAGCGTCCGAAATCGTTGCACTGGTGCTGCCCGCAGTGTCGCACGGATTACCAGCCGTCGGATCGACCCACACAATACGAATGCTTCTGTGGCAAGGAGGTGAATCCGGAGGCGCAACCATTTCTGGTGCCGCACTCCTGCGGCGAAATCTGTGGCAAACTGTTGCAGCCCAAATGTGGGCACGACTGCAAGCTACTCTGTCATCCCGGCCCCTGTCCACCATGCGCTCAACTGGCGCACAGTTCATGCCTCTGTGGCAAGTCGGCGCCACGCTCTGTGCGCTGCATAGACAAAAATTGGCAGTGCCTGCAAACATGCCAATCTCTGTTGTCGTGTGGCAAGCACAAGTGCAACCAAAGATGTCATCCACCTGGCCACTGTCCAccctgcagcagcaaaagcgcACAGCTCTGCGATTGCCAACGTGAGCAAAAAGTTGTGAACTGTGCGGAGCCCAAATGGAAgtgtaaaaatATTTGTGGCGCTCCTTTTGCGTGTGGTCTGCACAACTGCCACAAGGTGTGCCATGCGGCGCCTTGTGGCGGCGGCGAGTGTCCCCTAGGCGTGCGCAGCTGCCCCTGCGGCAAGAGCTTGAAAACTGGCGGCTGCAGCGAGACGCTGGAAACCTGTGGCGACACCTGCCAGAAGCTGTTGTCGTGTGGCAAGCACAGCTGTGCACAACGCTGCCATCGCGGACCCTGCAATCTGTGCCTGGTGCGCACCAAGAAGCAGTGTCGTTGTGGACTGCACGAGAAGGAATTGCCCTGCTGTAAAGAGTTCAACTGCGAAACCAAATGCAAACTGATGCGCGACTGCAACAAGCATGCCTGCAATCGAAAGTGCTGTGGGGATCAGTGTCCGCCATGCGAGAAGATCTGCGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGTCAATCTGTGTGCCACAATGGACCCTGTTATCCCTGCAAGCTGACATCGCAGGTAAATTGCCGCTGTGGCAAGACCCGTCGCAGTGTGCCCTGTGGCAGGGAGAAAAGCGCACGCATTGCTTGCCAGGAGCTATGCCGCATCACACCTAAATGTCATCATGCCATCAGGCATCGCTGCCACAAGGGCGAGTGTCCACCGTGTGCTCAGCAATGTGGCCTGTTAAATGATACCAGCCGCTGTGGACACATCTGCAAGGCACGTTGCCATGCAGCCATACGTGTGCTCAAGCCAGCGGATGCAGTGCGTCCGCATGCCAATAAGTATGAATACCACGCAGAAGCGCATCCCCGTTGTGAGGAGGGTGTCAGCGTCACCTGTATTGGCGGTCACGAGGTGGCCACCTGGCCGTGCTGGAACTCCAAGCCGTCGTCTTGCGCCCGCAAATGTGGGCGCCATTTGAAGTGTGGCAATCACAGCTGTGCGCTCTTCTGTCATGCGGTGCCCAATCCCGATGATATGCAGCAACAGGCGGGCTGTGCTCAATGCGAGCAGGGATGCGCAATTGCACGCCCTACCGGCTGCACACATGCTTGTGCCAAGGGCTGTCACCTGCCACCCTGTGCGCCCTGCAGTTTTGTGATAAAGACCAAATGCCACTGTGGCCTCAATCAGGTCATCTACAAGTGCAGCGAGTTCTTCAATCAGGAGGGATCTGTGCTGCAGATTATGGAGCGACGCCAGAAGCTGTGCAGCTGTGGCAATCGTTGTCTCAAGAatTTTGCTTGTGGCCATCGCTGCCTGACCATCTGCCATCCCGGCCCGTGTCCTAATCCCGAGCTGTGCCGCAAAAAGGTGCGCATTTTTTGTGCCTGTAAGCGGATCAAGCTGGAAATCGCCTGCGACAAGCATCGAGCGGGTCAAACATCCTTGGACTGTGATGGCAACTGTCAAGTGGAACGCTCCAAAGCGGCGGCAACGGAGCAGCAAGAATTGGAGCGCCGTTTGCGGCAAGAGGAGGAAAAGAATCGTCTCGAGCTGGAGAAATTCGAGCAAAAGTTTGGCAAGCGTAAGCACAAAGAGCGCAAGGCACTCGATGTGGAGCCAACAAAATCCGACATCGACTGGAAGCGTTGGGCCATCTGCGCGGTGGCCTTGCTGGCGGTTGTCGGCGCTCTTGCCGTGGCTTACTATGCGGACAGTTAA
Protein Sequence
MEKFNKAQAKNLAAARKLVDAYASSSEDEGELDEKHILDLLYKHYQSTSDNSSKRNDNNANRTATFLENTLHSGAATCLICIGSIRRVEPIWSCKSCYCFFHLRCIQRWANDSVMQMKVKAEQQNGNQGHYNHLGEFVPPKRPKSLHWCCPQCRTDYQPSDRPTQYECFCGKEVNPEAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKSAPRSVRCIDKNWQCLQTCQSLLSCGKHKCNQRCHPPGHCPPCSSKSAQLCDCQREQKVVNCAEPKWKCKNICGAPFACGLHNCHKVCHAAPCGGGECPLGVRSCPCGKSLKTGGCSETLETCGDTCQKLLSCGKHSCAQRCHRGPCNLCLVRTKKQCRCGLHEKELPCCKEFNCETKCKLMRDCNKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLTSQVNCRCGKTRRSVPCGREKSARIACQELCRITPKCHHAIRHRCHKGECPPCAQQCGLLNDTSRCGHICKARCHAAIRVLKPADAVRPHANKYEYHAEAHPRCEEGVSVTCIGGHEVATWPCWNSKPSSCARKCGRHLKCGNHSCALFCHAVPNPDDMQQQAGCAQCEQGCAIARPTGCTHACAKGCHLPPCAPCSFVIKTKCHCGLNQVIYKCSEFFNQEGSVLQIMERRQKLCSCGNRCLKNFACGHRCLTICHPGPCPNPELCRKKVRIFCACKRIKLEIACDKHRAGQTSLDCDGNCQVERSKAAATEQQELERRLRQEEEKNRLELEKFEQKFGKRKHKERKALDVEPTKSDIDWKRWAICAVALLAVVGALAVAYYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00535746;
90% Identity
iTF_00517392;
80% Identity
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