Basic Information

Insect: Drosophila nigritarsus
Gene Symbol: nfxl1
Assembly: GCA_035044305.1
Location: JAWNMF010000909.1:3227696-3230796[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2 2e+04 -8.1 6.4 15 19 150 154 149 154 0.82

2 20 0.13 1.3e+03 -0.3 0.4 4 10 185 191 184 191 0.95

3 20 6.5e-08 0.00065 19.8 15.5 1 18 199 215 199 216 0.98

4 20 2 2e+04 -5.2 2.0 6 10 242 246 241 246 0.78

5 20 2.2e-07 0.0022 18.1 18.2 1 19 252 271 252 271 0.97

6 20 1.2 1.2e+04 -3.4 0.9 5 10 295 300 295 300 0.92

7 20 2.1e-05 0.21 11.8 13.6 1 19 306 325 306 332 0.95

8 20 0.89 8.9e+03 -3.0 0.5 1 7 349 354 348 356 0.49

9 20 1e-07 0.0011 19.2 11.8 1 18 359 376 359 377 0.96

10 20 0.7 7e+03 -2.7 0.4 1 5 386 390 386 395 0.73

11 20 0.0039 39 4.6 16.7 1 18 411 428 411 429 0.94

12 20 3.3e-08 0.00034 20.7 14.7 1 19 438 456 432 456 0.90

13 20 0.37 3.7e+03 -1.8 1.1 6 10 484 488 483 488 0.92

14 20 0.00011 1.1 9.5 7.9 10 18 502 510 500 511 0.93

15 20 0.011 1.1e+02 3.1 5.6 1 11 523 532 523 533 0.95

16 20 2.4e-05 0.24 11.6 2.5 1 11 598 608 598 609 0.96

17 20 0.0042 42 4.5 16.2 3 19 638 654 637 654 0.92

18 20 1.7 1.7e+04 -3.8 1.4 8 13 659 664 658 664 0.73

19 20 3.3e-06 0.033 14.4 13.5 1 17 705 723 705 725 0.86

20 20 0.62 6.2e+03 -2.5 0.5 11 16 755 760 755 761 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2	2e+04	-8.1	6.4	15	19	150	154	149	154	0.82
2	20	0.13	1.3e+03	-0.3	0.4	4	10	185	191	184	191	0.95
3	20	6.5e-08	0.00065	19.8	15.5	1	18	199	215	199	216	0.98
4	20	2	2e+04	-5.2	2.0	6	10	242	246	241	246	0.78
5	20	2.2e-07	0.0022	18.1	18.2	1	19	252	271	252	271	0.97
6	20	1.2	1.2e+04	-3.4	0.9	5	10	295	300	295	300	0.92
7	20	2.1e-05	0.21	11.8	13.6	1	19	306	325	306	332	0.95
8	20	0.89	8.9e+03	-3.0	0.5	1	7	349	354	348	356	0.49
9	20	1e-07	0.0011	19.2	11.8	1	18	359	376	359	377	0.96
10	20	0.7	7e+03	-2.7	0.4	1	5	386	390	386	395	0.73
11	20	0.0039	39	4.6	16.7	1	18	411	428	411	429	0.94
12	20	3.3e-08	0.00034	20.7	14.7	1	19	438	456	432	456	0.90
13	20	0.37	3.7e+03	-1.8	1.1	6	10	484	488	483	488	0.92
14	20	0.00011	1.1	9.5	7.9	10	18	502	510	500	511	0.93
15	20	0.011	1.1e+02	3.1	5.6	1	11	523	532	523	533	0.95
16	20	2.4e-05	0.24	11.6	2.5	1	11	598	608	598	609	0.96
17	20	0.0042	42	4.5	16.2	3	19	638	654	637	654	0.92
18	20	1.7	1.7e+04	-3.8	1.4	8	13	659	664	658	664	0.73
19	20	3.3e-06	0.033	14.4	13.5	1	17	705	723	705	725	0.86
20	20	0.62	6.2e+03	-2.5	0.5	11	16	755	760	755	761	0.80

Sequence Information

Coding Sequence: atggaaaagtttaATAAAGCGCAGGCAAAAAATTTGGCAGCCGCAAAGAAGCTTGTCGATGCATATGCATCGAGTTCAGAGGATGAAGGCGAATTGGATGAAAAACACATACTggATCTGCTTTATAAGCATTATCAAAGCACGCCGGGTAACACGAGCAAACGCAACGACAATAATGCCAATCGTACGGCTACTTTTCTGGAGAACACCCTGCACTCCGGAGCGGCGACATGTCTCGTTTGCATTGGCAGCATTCGGCGCGTGGAGTCGATTTGGTCATGCAAATCATGCTATTGCTTCTTCCATCTGAGATGCATTCAGCGCTGGGCCAATGATAGCGTCATGCAAATGAAGGTCAAGGCAGAGCAGCAGAATGGCGGCCAGGGGCATTACAATCACCTCGGCGAGTTTGTGCCGCCCAAGCGTCCGAAATCGTTGCACTGGTGCTGTCCACAGTGTCGCACGGATTACCAGCCCTCGGATAGACCCACTCAATATGAATGCTTCTGCGGCAAGGAGGTAAATCCGGAGGCGCAACCATTTCTGGTGCCGCACTCCTGCGGCGAAATCTGTGGCAAACTGTTGCAGCCGAAATGTGGCCACGACTGCAAGCTACTCTGTCATCCCGGCCCCTGTCCACCGTGCGCCCAACTAGCGCACAGTTCCTGCCTCTGCGGCAAGTCGGCGCCACGCTCTGTGCGCTGCATAGACAAAAATTGGCAGTGCCAGCAAAACTGCCAATCTCTGTTGTCGTGTGGCAAGCACAAGTGCAACCAAAGATGCCATCCACCTGGCCAGTGTCCGCCCTGCAGCAGCAAGAGTGCCCAGCGCTGCGATTGCCAACGTGAGCAAAAAGTTGTCAACTGTGCGGAGCCCAAATGGAAgtgtaaaaatATTTGTGGCGCTGCTTTTGCCTGTGGCCTGCACAACTGCGACAAGGTGTGTCATGCGGCGCCTTGTGGCGGAGAGTGTCCCCTGGGCGTGCGCAGTTGCCCCTGTGGCAAGAGCtTGAAAACTGGCGGCTGCAGCGAGGCGCTGGAAACATGTGGCGACACCTGCCAGAAGCTGTTGTCGTGTGGCAAGCACAGCTGTGCACAACGCTGCCATCGCGGTCCTTGCAACCTGtgccTGGTGCGCACCAAGAAGCAGTGTCGTTGTGGTCTGCACGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCAACTGCGAAACCAAATGCAAACTGATGCGCGACTGCAACAAGCATACCTGCAATCGAAAGtGCTGTGGGGATCAGTGTCCGCCGTGCGAGAAGATCTGCGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGTCAGTCTGTGTGCCACAATGGACCCTGTTATCCCTGCAAGCTGACATCGCAGGTTAATTGCCGGTGTGGCAAGACTCGGCGTAGTGTGCCCTGTGGCAGAGAAAAAAGCGCACGCATTGCCTGCCAGGAGCTATGTCGCGTCACACCTAAATGCCATCATGCCATCAGGCATCGTTGCCACAAGGGCGAGTGTCCACCGTGCGCTCAGCCATGTGGCATGTTAAATGATGCCAGCCGCTGTGGACACATCTGCAAGGCACGCTGCCACGCAGCAATACGCGTGCTCAAGCCAGCGGATGCAGTGCGTCCGCATGCCAATAAgTATGAATACCGCGCAGAGGCGCATCCGCGTTGCGAGGAGGGTGTTAGCGTCACATGCATTGGTGGTCACGAGGTGGCCACCTGGCCGTGCTGGAACTCCAAGCCGTCGTCCTGCGCCCGCAAATGTGCGCGCCGCTTGAAGTGTGGCAATCACAGCTGTGCGCTTTTCTGTCATGCGGTGCCCAATCCCATGGATATGCAGCATCAGGCGGGCTGTGCTCAGTGCGAGCAAGGATGCGCAATTGCACGTCCTGCCGGCTGCACACATACCTGTGCCAAAGGCTGTCATCCGCCGCCCTGTGCGCCCTGCAGTTTTGTGATGAAGAACAAATGCCACTGTGGCCTCAATCAGGTCGTCTACAAGTGCAGCGAGTTCTTCAATCAGGAGGGATCTGTGCAGCAGATTGTGGAGCGCCGCCAGAAGCTGTGCAGCTGTGGCAATCGGTGCCtcaagaatTTTGCTTGTGGCCATCGCTGCCTGACCATCTGTCATCCCGGCCCGTGTCCCAATCCCGAGCAGTGTCGCAAAAAGGTGCGCATTTTTTGTTCCTGCAAGCGCATCAAGCTGGAGATAGCCTGTGACAAGCATCGAGCGGGTCAAACATCCTTGGAATGCGATGGCAACTGCCAAGCGGAACGCTCTAAAGCGGCGGCAGTGGAGCAGCAAGAACTGGAGCTGCGCCAGCGGCTGGAGGAGGAAAATAATCGTCTCGAGCTGGAGAAATTCGAACAAAAGTTTGGCAAGCGTAAGCACAAAGAGCGCAAGGCACTCGATGTGGAGCCCACCAAATCCGACATCGATTGGAAGCGCTGGGCCATCTGCGCACTGGCCTTTCTGGCGGTTGTCGGCGCTCTCGCCGTGGCTTACTATGCGGACAGTTAA
Protein Sequence: MEKFNKAQAKNLAAAKKLVDAYASSSEDEGELDEKHILDLLYKHYQSTPGNTSKRNDNNANRTATFLENTLHSGAATCLVCIGSIRRVESIWSCKSCYCFFHLRCIQRWANDSVMQMKVKAEQQNGGQGHYNHLGEFVPPKRPKSLHWCCPQCRTDYQPSDRPTQYECFCGKEVNPEAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKSAPRSVRCIDKNWQCQQNCQSLLSCGKHKCNQRCHPPGQCPPCSSKSAQRCDCQREQKVVNCAEPKWKCKNICGAAFACGLHNCDKVCHAAPCGGECPLGVRSCPCGKSLKTGGCSEALETCGDTCQKLLSCGKHSCAQRCHRGPCNLCLVRTKKQCRCGLHEKELPCSKEFNCETKCKLMRDCNKHTCNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLTSQVNCRCGKTRRSVPCGREKSARIACQELCRVTPKCHHAIRHRCHKGECPPCAQPCGMLNDASRCGHICKARCHAAIRVLKPADAVRPHANKYEYRAEAHPRCEEGVSVTCIGGHEVATWPCWNSKPSSCARKCARRLKCGNHSCALFCHAVPNPMDMQHQAGCAQCEQGCAIARPAGCTHTCAKGCHPPPCAPCSFVMKNKCHCGLNQVVYKCSEFFNQEGSVQQIVERRQKLCSCGNRCLKNFACGHRCLTICHPGPCPNPEQCRKKVRIFCSCKRIKLEIACDKHRAGQTSLECDGNCQAERSKAAAVEQQELELRQRLEEENNRLELEKFEQKFGKRKHKERKALDVEPTKSDIDWKRWAICALAFLAVVGALAVAYYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00535746;
90% Identity: iTF_00607499;
80% Identity: -