Dhaw014940.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila hawaiiensis
Gene Symbol
nfxl1
Assembly
GCA_037043685.1
Location
JBAMBA010000250.1:1848238-1851368[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1.3 1.1e+04 -3.5 1.8 15 19 128 132 127 132 0.83
2 20 0.12 1.1e+03 -0.3 0.4 4 10 163 169 162 169 0.95
3 20 6.3e-08 0.00054 19.9 15.5 1 18 177 193 177 194 0.98
4 20 1 8.7e+03 -3.2 2.7 6 10 220 224 219 224 0.89
5 20 4.9e-08 0.00042 20.2 16.1 1 19 230 249 230 249 0.98
6 20 1.1 9.8e+03 -3.3 0.9 5 10 273 278 273 278 0.92
7 20 2.5e-05 0.21 11.6 13.0 1 19 284 304 284 304 0.94
8 20 1e-07 0.00087 19.2 11.8 1 18 337 354 337 355 0.96
9 20 0.68 5.8e+03 -2.6 0.4 1 5 364 368 364 373 0.73
10 20 0.021 1.8e+02 2.2 15.9 1 18 389 406 389 407 0.94
11 20 3.3e-08 0.00028 20.8 14.7 1 19 416 434 410 434 0.90
12 20 0.36 3.1e+03 -1.7 1.1 6 10 462 466 461 466 0.92
13 20 0.00011 0.94 9.5 7.9 10 18 480 488 478 489 0.93
14 20 0.01 89 3.2 5.6 1 11 501 510 501 511 0.95
15 20 0.76 6.5e+03 -2.8 1.0 1 4 570 573 566 573 0.84
16 20 1.1e-05 0.091 12.8 2.8 1 11 576 586 576 587 0.96
17 20 0.031 2.6e+02 1.7 13.3 3 19 616 632 615 632 0.92
18 20 2 1.7e+04 -5.5 2.1 9 13 638 642 637 642 0.72
19 20 1.7e-06 0.014 15.3 12.0 1 16 683 697 683 703 0.92
20 20 0.6 5.1e+03 -2.4 0.5 11 16 733 738 733 739 0.80

Sequence Information

Coding Sequence
atggaaaaTTCAGAGGATGAGGGCGGATTGGATGAAAAACATATACTGGATCTGCTCTACAAGCATTATCAAATCACGCCGGATAACTCAAGCAAACGCAACGACAATAATGCCAATCGTACGGCTACCTTTCTGGAGAACACCCTGCACTCGGGAGCGGCAACATGTCTCATTTGCATTGGCAGCATTCGGCGCGTGGAGCCGATTTGGTCATGCAAATCATGTTATTGCTTCTTCCATCTGAGGTGCATTCAGCGCTGGGCGAACGATAGCGTCATGCAAATGAAAGTCAAGGCAGAGCAGCAGAATGGCAACCAGGGTCACTACAATCATCTCGGCGAGTTTGTGCCGCCCAAGCGTCCGAAATCGTTGCACTGGCGCTGCCCGCAGTGTCGCACGGATTACCAGCCGTCGGATCGACCCACACAATATGAATGCTTCTGCGGCAAAGAGGTGAATCCGGAGGCGCAACCATTTCTGGTGCCGCACTCTTGCGGCGAAATCTGTGGCAAACTGTTGCAGCCGAAATGTGGGCACGACTGCAAGTTACTCTGTCATCCCGGCCCTTGTCCACCATGCGCTCAACTGGCGCACAGTTCATGCCTCTGTGGCAAGTCGATGCCACGCTCTGTGCGCTGCATAGATAAAAATTGGCAGTGCCAGCAAACATGCCAATCTCTGTTGTCGTGTGGCAAGCACAAGTGCAACCAAAGATGCCATCTACCTGGCCAGTGTCCGCCCTGCAGCAGCAAGAGTGCCCAGCACTGCGATTGCCAACGTGAGCAAAAAGTTGTGAACTGTGCGGAGCCCAAATGGAAGTGTAAAAATATTTGTGGCGCTCCTTTTGCGTGTGGTCTGCACAACTGCGACAAGGTGTGCCATGCGGCGCCTTGTGGCGGCGGCGAGTGTCCCCTGGGTGCGCAGCTGCCCCTGTGGCAAGAGCTTAAAAACTGGCGGCTGCGCCGAGACGCTGGAGACCTGTGGCGACACCTGCCGAAGCTGTTGCCATGTGGCAAGCACAGCTGTGCACAACGCTGCCATCGCGGACCCTGCAATCTGTGCCTGGTGCGCACCAAGAAGCAATGCCGTTGTGGACTGCACGAGAAGGAATTGCCCTGCTCTAAGGAGTTCAACTGCGAAACCAAATGCAAACTGATGCGCGACTGCAACAAGCATGCCTGCAATCGAAAGtgctGTGGGGATCAGTGTCCGCCGTGCGAGAAGATCTGCGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGTCAATCTGTGTGCCACAATGGACCCTGTTATCCCTGCAAGCTGACATCGCAGGTAAATTGCCGCTGTGGCAAGACCCGTCGCAGTGTGCCCTGTGGCAGAGAGAAAAGCGCACGAATTGCTTGCCAGGAGCTATGTCGCATCACACCTAAATGTCATCATGCCATCAGGCATCGCTGCCACAAGGGTGAGTGTCCACCGTGTGCTCAGCCATGTGGCCTGTTAAATGATACCAGCCGCTGTGGACACATCTGCAAGGCACGTTGCCATGCAGCCATACGTGTGCTCAAGCCAGCGGATGCAGTGCGTCCGCATGTCAATAAGTATGAATACCACGCAGAGGCGCATCCCCGTTGCCAGGAGGGTGTCAACGTCACCTGTATTGGCGGTCACGAGGTGGCCACCTGGCCGTGCTGGAACTCCAAGCCCTCGTCCTGCGCCCGCAAATGTGGGCGTCACTTGAAGTGTGGCAATCACAGATGTGCGCTCTTCTGTCATGCGGTGCCCATTCCCGATGATATGCAGCAACAGGCGGGCTGTGCTCAATGTGAGCAGGGATGCGCAATTCCACGTCCTACCGGCTGCACACATGCCTGTGCCAAGGGCTGTCATCTGCCGCCCTGTGCGCCCTGCAGTTTTGTGATGAAGACCAAATGCCACTGTGGCCTCAATCAGGTCATCTACAAGTGCAGCGAGTTCTTCAATCAGGAGGGATCTGTGCTGCAGATTATGGAGCGACGCCAGAAGCTGTGCAGCTGTGGCAATCGTTGTCTCAAGAATtttgcttGTGGTCATCGCTGCCTGACCATCTGCCATCCCGGCCCGTGTCCTAATCCCGAGCTGTGCCGCAAAAAGGTGCGCATTTTTTGTGTCTGTAAGCGGATCAAGCTGGAAATCGCCTGCGACAAGCATCGAGCGGGTCAAACATCCTTGGACTGCGATGGCAACTGTCAAGCAGAACGCTCCAAGGCGGCGGCAACGGAACAGCAAGAATTTGAGCGCCGTTTGCGGCAGGAGGAGGAAAAGAATCGTCTCGAGCTGGAGAAATTCGAGCAAAAGTTTGGCAAGCGTAAGCACAAAGAGCGCAAGGCACTCGATGTGGAGCCAACAAAATCCGACATCGACTGGAAGCGTTGGGCCATCTGCGCGGTGGCCTTGCTGGCGGTTGTCGCCGCTCTCGCCGTGGCTTACTATGCGGACAGTTAA
Protein Sequence
MENSEDEGGLDEKHILDLLYKHYQITPDNSSKRNDNNANRTATFLENTLHSGAATCLICIGSIRRVEPIWSCKSCYCFFHLRCIQRWANDSVMQMKVKAEQQNGNQGHYNHLGEFVPPKRPKSLHWRCPQCRTDYQPSDRPTQYECFCGKEVNPEAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKSMPRSVRCIDKNWQCQQTCQSLLSCGKHKCNQRCHLPGQCPPCSSKSAQHCDCQREQKVVNCAEPKWKCKNICGAPFACGLHNCDKVCHAAPCGGGECPLGAQLPLWQELKNWRLRRDAGDLWRHLPKLLPCGKHSCAQRCHRGPCNLCLVRTKKQCRCGLHEKELPCSKEFNCETKCKLMRDCNKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLTSQVNCRCGKTRRSVPCGREKSARIACQELCRITPKCHHAIRHRCHKGECPPCAQPCGLLNDTSRCGHICKARCHAAIRVLKPADAVRPHVNKYEYHAEAHPRCQEGVNVTCIGGHEVATWPCWNSKPSSCARKCGRHLKCGNHRCALFCHAVPIPDDMQQQAGCAQCEQGCAIPRPTGCTHACAKGCHLPPCAPCSFVMKTKCHCGLNQVIYKCSEFFNQEGSVLQIMERRQKLCSCGNRCLKNFACGHRCLTICHPGPCPNPELCRKKVRIFCVCKRIKLEIACDKHRAGQTSLDCDGNCQAERSKAAATEQQEFERRLRQEEEKNRLELEKFEQKFGKRKHKERKALDVEPTKSDIDWKRWAICAVALLAVVAALAVAYYADS