Dbas001115.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila basisetae
Gene Symbol
nfxl1
Assembly
GCA_035041595.1
Location
JAWNLB010000020.1:4931704-4935223[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 2 1.6e+04 -8.1 6.4 15 19 150 154 149 154 0.82
2 21 0.13 1e+03 -0.3 0.4 4 10 185 191 184 191 0.95
3 21 6.5e-08 0.00052 19.8 15.5 1 18 199 215 199 216 0.98
4 21 2 1.6e+04 -4.4 1.3 6 10 242 246 241 247 0.67
5 21 2.4e-07 0.0019 18.0 16.1 1 19 252 271 252 271 0.95
6 21 1.2 9.5e+03 -3.4 0.9 5 10 295 300 295 300 0.92
7 21 1.3e-05 0.11 12.4 12.1 1 19 306 326 306 326 0.94
8 21 0.89 7.1e+03 -3.0 0.5 1 7 350 355 349 357 0.49
9 21 1e-07 0.00084 19.2 11.8 1 18 360 377 360 378 0.96
10 21 2 1.6e+04 -5.4 3.5 1 5 387 391 384 396 0.72
11 21 0.022 1.8e+02 2.2 15.9 1 18 412 429 412 430 0.94
12 21 3.4e-08 0.00027 20.7 14.7 1 19 439 457 433 457 0.90
13 21 0.37 2.9e+03 -1.8 1.1 6 10 485 489 484 489 0.92
14 21 9e-05 0.73 9.8 8.2 10 19 503 512 501 512 0.91
15 21 0.011 86 3.1 5.6 1 11 524 533 524 534 0.95
16 21 0.78 6.3e+03 -2.8 1.0 1 4 593 596 589 596 0.84
17 21 2.4e-05 0.2 11.6 2.5 1 11 599 609 599 610 0.96
18 21 0.032 2.5e+02 1.6 13.3 3 19 639 655 638 655 0.92
19 21 2 1.6e+04 -5.5 2.1 9 13 661 665 660 665 0.72
20 21 1.7e-06 0.014 15.3 12.0 1 16 706 720 706 726 0.92
21 21 1.8 1.4e+04 -3.9 1.1 7 11 757 761 756 762 0.45

Sequence Information

Coding Sequence
atggaaaagtttaACAAAGCGCAGGCAAAGCATTTCGCAGCCGCAAAGAAGCTTGTCGATGCATACGCATCCAGTTCAGAAGATGAGGGCGAATTAGATGAAAAACATATACTGGATCTGCTCTACAAGCATTATCAAAGCACGCCGGATAACTGGAGCAAACGCAACGACAATAATGCCAATCGTACGGCTACCTTTTTGGAGAACACCCTGCACTCGGGAGCGGCAACATGCCTCATTTGCATTGGAAGCATTCGGCGCGTGGAGCCGATTTGGTCATGCAAATCATGCTATTGCTTCTTCCATCTGCGGTGCATTCAGCGCTGGGCCAACGATAGCGTCATGCAAATGAAAGTCAAGGCAGAGCAGCAGAATGGCAACCAGGGTCACTACAATCATCTCGGCGAGTTTGTGCCGCCCAAGCGTCCGAAATCGTTGCACTGGTGCTGCCCGCAGTGTCGCACGGATTACCAACCGTCGGATCGACCCACACAATATGAATGCTTCTGCGGCAAAGAGGTGAATCCAGAGGCGCAACCATTTCTGGTGCCGCACTCGTGCGGCGAAATCTGTGGCAAACTGTTGCAGCCGAAATGTGGGCACGACTGCAAGTTACTCTGTCATCCCGGCCCTTGTCCACCATGCGCTCAAATGGCGCACAGTTCCTGCCTCTGTGGCAAGTCGGCGCCACGCTCTGTGCGCTGCTTAGACAAAAATTGGCAGTGCCAGCTAACATGCCAATCTTTGTTGTCGTGTGGCAAGCACAAGTGCAACCAAAGATGCCATCCACTTGGCCAATGTCCGCCCTGCAGCAGCAAGAGTGCCCAGCACTGCGATTGCCGACGTGAGCAAAAAGTTGTGAACTGTGCGGAGCCCAAATGGAAGTGTAAAAACATTTGTGGCGCTCCTTTTGGGTGTGGTCTGCACAACTGCGACAAGGTGTGCCATGCGTCGCCTTGTGGCGGCGACGAATGTCCCCTGGGCGTGCGCAGCTGCCCCTGTGGCAAGAGCTTGAAAACTGGCGGCTGCAGCGAGACGCTGGAAACCTGTGGCGACACCTGCCAGAAGCTGTTGTCGTGTGGCAAGCACAGCTGTGCACAACGCTGCCATCGCGGACCCTGCAATCTGTGCCTGGTGCGCACCAAGAAGCAGTGTCATTGTGGACTGCACGAGAAGGAATTGCCCTGCTCTAAGGAGTTCAACTGCGAAACCAAATGCAAACTGATGCGCGACTGCAACAAGCATGCCTGCAATCGAAAGTGCTGTGGGGATCAGTGTCCGCCGTGCGAGAAGATCTGCGGCAAGCAGCTGAGCTGCAACAAGCATAAGTGTCAATCTGTGTGCCACAATGGACCTTGTTATCCGTGCAAGTTGACATCGCAGGTAAATTGCCGCTGTGGCAAGACCCATCGCAGTGTGCCCTGTGGCAGAGAGAAAAGCGCACGCATTGCTTGCCAGGAGCTATGTCGCATCACACCTAAATGTCATCATGCCATCAGGCATCGCTGCCACAAGGGCGAGTGTCCACCATGTACTCAGCCATGTGGCCTGTTAAATGATACCAGCCGCTGTGGACACATCTGCAAGGCACGTTGCCACGCAGCCATACGTGTGCTCAAGCCAACGGATGCAGTGCGTCTGCATGCCAATAAGTATGAATACCACGCAGAGGCGCATCCCCGTTGCCAGGAGGGTGTCAGCGTCACCTGTATTGGCGGTCACGAGGTGGCCACCTGGCCGTGCTGGAACTCCAAGCCGTCGTCCTGCGCCCGCAAATGTGGGCGCCACTTGAAGTGTGGCAATCACAGCTGTGCGCTCTTCTGTCATGCGGTGCCCAATCCCGATGATATGCAGCAACAGGTGGGCTGTGCTCAATGCGAGCAGGGATGCGCAATTCCACGTCCTACCGGCTGCACACATGCCTGTGCTAAGGGCTGTCATCTGCCGCCCTGTGCGCCCTGCAGTTTTGTGATGAAGACCAAATGCCACTGTGGCCTCAATCAGGTCATATATAAGTGCAGCGAGTTCTTTAATCAGGAGGGATCTGTGCTGCAGATTTTGGAGCGGCGTCAGAAGCTGTGCAGCTGTGGCAATCGTTGCCTCAAGAATtttgcttGTGGCCATCGTTGCCTGACCATCTGCCATCCCGGCCCGTGTCCTAATCCCGAGCTGTGCCGCAAAAAGGTGCGCATTTTTTGTGCCTGTAAGCGGATCAAGCTTGAGATAGCCTGCGACAAGCATCGAGCGGGTCAAACATCCTTGGACTGCGATGGCAATTGTCACGCGGAACGCTCCAAAGCGGCGGCAACGGAACAGCAAGAATTGGATCGCCGTTTGCGGCAAGAAGAGGCAAAGAATCGTCTCGAGCTGGAGAAATTCGAGCAAAAGTTTGGCAAGCGTAAGCACAAAGAGCGCAAGGCACTCGATGTGGAGCCAACAAAATCCGAAATCGACTGGAAGCGTTGGGCCATCAGCGCGGTGGCCTTGCTGGCGGTTGCCGGCGCTCTCGCCGTGGCTTACTATGCGGACAGTTAA
Protein Sequence
MEKFNKAQAKHFAAAKKLVDAYASSSEDEGELDEKHILDLLYKHYQSTPDNWSKRNDNNANRTATFLENTLHSGAATCLICIGSIRRVEPIWSCKSCYCFFHLRCIQRWANDSVMQMKVKAEQQNGNQGHYNHLGEFVPPKRPKSLHWCCPQCRTDYQPSDRPTQYECFCGKEVNPEAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQMAHSSCLCGKSAPRSVRCLDKNWQCQLTCQSLLSCGKHKCNQRCHPLGQCPPCSSKSAQHCDCRREQKVVNCAEPKWKCKNICGAPFGCGLHNCDKVCHASPCGGDECPLGVRSCPCGKSLKTGGCSETLETCGDTCQKLLSCGKHSCAQRCHRGPCNLCLVRTKKQCHCGLHEKELPCSKEFNCETKCKLMRDCNKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLTSQVNCRCGKTHRSVPCGREKSARIACQELCRITPKCHHAIRHRCHKGECPPCTQPCGLLNDTSRCGHICKARCHAAIRVLKPTDAVRLHANKYEYHAEAHPRCQEGVSVTCIGGHEVATWPCWNSKPSSCARKCGRHLKCGNHSCALFCHAVPNPDDMQQQVGCAQCEQGCAIPRPTGCTHACAKGCHLPPCAPCSFVMKTKCHCGLNQVIYKCSEFFNQEGSVLQILERRQKLCSCGNRCLKNFACGHRCLTICHPGPCPNPELCRKKVRIFCACKRIKLEIACDKHRAGQTSLDCDGNCHAERSKAAATEQQELDRRLRQEEAKNRLELEKFEQKFGKRKHKERKALDVEPTKSEIDWKRWAISAVALLAVAGALAVAYYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00535746;
90% Identity
iTF_00517392;
80% Identity
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