Dmel007115.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila melanosoma
Gene Symbol
nfxl1
Assembly
GCA_035042045.1
Location
JAWNLY010000145.1:1878487-1881653[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 1.7e+04 -8.1 6.4 15 19 150 154 149 154 0.82
2 20 0.13 1.1e+03 -0.3 0.4 4 10 185 191 184 191 0.95
3 20 6.5e-08 0.00055 19.8 15.5 1 18 199 215 199 216 0.98
4 20 2 1.7e+04 -5.2 2.0 6 10 242 246 241 246 0.78
5 20 1.1e-07 0.00089 19.1 18.5 1 19 252 271 252 271 0.97
6 20 1.2 9.9e+03 -3.4 0.9 5 10 295 300 295 300 0.92
7 20 3.9e-05 0.33 10.9 13.7 1 19 306 326 306 333 0.94
8 20 0.89 7.5e+03 -3.0 0.5 1 7 350 355 349 357 0.49
9 20 9.1e-06 0.076 13.0 10.2 1 18 360 377 360 378 0.96
10 20 0.7 5.9e+03 -2.7 0.4 1 5 387 391 387 396 0.73
11 20 0.0039 33 4.6 16.7 1 18 412 429 412 430 0.94
12 20 3.4e-08 0.00028 20.7 14.7 1 19 439 457 433 457 0.90
13 20 0.37 3.1e+03 -1.8 1.1 6 10 485 489 484 489 0.92
14 20 9e-05 0.76 9.8 8.2 10 19 503 512 501 512 0.91
15 20 0.011 90 3.1 5.6 1 11 524 533 524 534 0.95
16 20 8.6e-05 0.72 9.8 2.7 1 11 599 609 599 610 0.95
17 20 0.031 2.6e+02 1.7 16.2 3 19 639 655 630 655 0.88
18 20 1.7 1.4e+04 -3.8 1.4 8 13 660 665 659 665 0.73
19 20 1.7e-06 0.015 15.3 12.0 1 16 706 720 706 726 0.92
20 20 1.1 9.4e+03 -3.3 0.6 11 16 756 761 756 762 0.74

Sequence Information

Coding Sequence
atggaaaagtttaATAAAGCGCAGGCAAAGAATTTGGCAGCCGCAAAGAAGCTTGTGGATGCCTACGAATCCAGCTCAGAGGATGAAGGGGAACTAGATGAAAAACACATACTGgATCTGCTATACAAGCATTATCAAAGCACGCCGGATAACTCGAAAAAACGCAACGACAATAATGCCAATCGTACGGCTACATTTCTGGAGAACACCCTACACTCCGGAGCAGCGACATGTCTCGTTTGCATTGGCAGCATTCGACGTGTGGAGCCGATTTGGTCATGCAAATCATGCTATTGCTTCTTCCATCTGAGGTGCATTCAGCGCTGGGCCAACGATAGCGTCATGCAAATGAAAGTCAAGGCAGAGCAGCAGAATGGGAGTCAGGGGCATTACAATCATCTCGGCGAGTTTGTGCCGCCCAAGAGTCCGAAATCGTTGCACTGGTGCTGTCCACAATGTCGTACGGATTACCAGCCCTCGGATCGACCTACGCAATATGAATGCTTCTGCGGCAAGGAGGTGAATCCGGAGGCGCAACCATTTCTGGTGCCACATTCCTGTGGCGAAATCTGTGGCAAACTGTTGCAGCCGAAATGCGGCCACGACTGCAAGCTACTCTGTCATCCAGGCCCCTGTCCACCGTGCGCACAACTGGCGCAAAGTTCCTGCCTCTGCGGCAAGTCGCCGTCACGCTCTGTGCGCTGCATAGACAAAAATTGGCAGTGCCAGCAAAACTGCCAATCTCTATTGTCGTGTGGCAAGCACAAGTGCAACCAAAAATGCCATCCACCTGGACAGTGTCCGCCTTGCAGCAGCAAGAGTTCTCAGTACTGTGATTGCCAACGTGAGCAAAAAGTTGTCAACTGTGCAGAGCCTAAATGGAAgtgtaaaaatATATGTGGCGCAGCTTTTGCTTGTGGTCTGCACAACTGCGACAAGGTGTGCCATGCGGCGCCCTGTGGCGGCGGCGAGTGTCCCCTGGGCATGCGCAGTTGCCCCTGTGGGAAAAGCttGAAAACGGGCGGCTGCAGCGAGGCGCTAGAAACATGTGGCGACACCTGCCAGAAGCTGTTACGGTGTGGCAAGCACAGCTGTGCACAACGTTGCCATCGCGATCCTTGCAACCTGTGCCTGGTTCGCACCAAGAAAAAGTGCCGTTGTGGTCTGCACGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCAACTGCGAAACCAAATGCAAACTAATGCGCGACTGCAACAAGCATACCTGCAATCGAAAGtgctGTGGGGATCAGTGTCCGCCCTGCGAGAAGATATGCGGCAAGCAGCTAAGCTGCAACAAGCACAAGTGTCAGTCTGTGTGCCATAATGGACCCTGTTATCCCTGCAAGCTAACATCGCAGGTCATTTGCCGCTGTGGCAAGACCCGGCGCAGTGTGCCATGTGGCAGAGAGAAAAGCGCACGCATCGCCTGCCAGGAGCTATGTCGAGTCACACCTAAATGCCACCATGCTATCAGGCATCGCTGCCACAAGGGCGAGTGTCCTCCGTGTACTCAACCATGTGGCCTGTTAAATGATAACAGCAGCTGTGGACACATCTGCAAGGCTCGCTGCCACGCAGCCATACGTGTGCTCAAGCCAACGGATACAGTGCGTCCGCATGCCAATAagTACGAATATCACGCAGAGGCGCATCCGCGTTGCGAGGAAGGTGTTAGCGTTACATGCATTGGTGGTCACGAAGTGGCCACATGGCCGTGTTGGAATTCTAAGCCGTCGTCGTGCGCCCGCAAATGTGCACGCCACTTGAAGTGCGGAAATCATAGCTGTGCGATCTTCTGTCATGCGGTGCCCAATCCCAACGatatgcagcagcaggcgaGCTGTGCTCAGTGTGAGCAAGGATGCGGAATTCCACGTCCTGCCGGCTGCACACATGCCTGTGCCAAGGGTTGTCATCCGCCGCCGTGTGCGCCCTGCAGTTTTGTGATGAAGAACAAATGCCATTGTGGCCTCAATCAGGTCATCTACAAGTGTAGCGAGTTCTTTAATCTGGAGGGATCTGTGCAGCAGATTGTGGAGCGCCGCCACAAGCTGTGCAGTTGTGGCAATCGGTGCCTCAagaatTTCGCTTGTGGCCATCGCTGCCTGACCATCTGCCATCCCGGCCCGTGTCCCAATCCCGAGCTCTGCCGCAAAAAGGTGCGAATTTTTTGTGCTTGTAAGCGCATCAAGCTGGAGATAGCCTGCGACAAACATCGAGCCGGTCAAACGTCGTTGAATTGTGATGGGAGCTGCCAAGAAGCACGTACCAGGGCGGCGGAAATGGAGCAGCAAGAATTGGAACGTCGTCTGCGGCTGGAAGAGGAAAAGAATCGTCTGGAGCTGGAAAAATTCCAGAAAAAGTTTGGCAAGCGTAAGCACAAAGAGTGCAAGGCACATGATGTTGAGCCAACCAAATCCGACATCGATTGGAAGCGTTGGGCCATCTGCGCACTTGCCTTTCTGGCGGTTGTCGGCGCCCTCGCCGTAGCTTACTATGCGGACAGTTAA
Protein Sequence
MEKFNKAQAKNLAAAKKLVDAYESSSEDEGELDEKHILDLLYKHYQSTPDNSKKRNDNNANRTATFLENTLHSGAATCLVCIGSIRRVEPIWSCKSCYCFFHLRCIQRWANDSVMQMKVKAEQQNGSQGHYNHLGEFVPPKSPKSLHWCCPQCRTDYQPSDRPTQYECFCGKEVNPEAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAQSSCLCGKSPSRSVRCIDKNWQCQQNCQSLLSCGKHKCNQKCHPPGQCPPCSSKSSQYCDCQREQKVVNCAEPKWKCKNICGAAFACGLHNCDKVCHAAPCGGGECPLGMRSCPCGKSLKTGGCSEALETCGDTCQKLLRCGKHSCAQRCHRDPCNLCLVRTKKKCRCGLHEKELPCSKEFNCETKCKLMRDCNKHTCNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLTSQVICRCGKTRRSVPCGREKSARIACQELCRVTPKCHHAIRHRCHKGECPPCTQPCGLLNDNSSCGHICKARCHAAIRVLKPTDTVRPHANKYEYHAEAHPRCEEGVSVTCIGGHEVATWPCWNSKPSSCARKCARHLKCGNHSCAIFCHAVPNPNDMQQQASCAQCEQGCGIPRPAGCTHACAKGCHPPPCAPCSFVMKNKCHCGLNQVIYKCSEFFNLEGSVQQIVERRHKLCSCGNRCLKNFACGHRCLTICHPGPCPNPELCRKKVRIFCACKRIKLEIACDKHRAGQTSLNCDGSCQEARTRAAEMEQQELERRLRLEEEKNRLELEKFQKKFGKRKHKECKAHDVEPTKSDIDWKRWAICALAFLAVVGALAVAYYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00535746;
90% Identity
iTF_00517392;
80% Identity
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