Dkam001244.1
Basic Information
- Insect
- Drosophila kambysellisi
- Gene Symbol
- nfxl1
- Assembly
- GCA_035042185.1
- Location
- JAWNLS010000077.1:3293006-3296181[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 1.9e+04 -8.1 6.4 15 19 149 153 148 153 0.82 2 21 0.13 1.2e+03 -0.3 0.4 4 10 184 190 183 190 0.95 3 21 6.5e-08 0.00061 19.8 15.5 1 18 198 214 198 215 0.98 4 21 0.26 2.5e+03 -1.3 1.7 5 10 240 245 240 245 0.95 5 21 2.2e-07 0.002 18.1 18.2 1 19 251 270 251 270 0.97 6 21 1.2 1.1e+04 -3.4 0.9 5 10 294 299 294 299 0.92 7 21 4.4e-05 0.41 10.8 13.9 1 19 305 325 305 332 0.94 8 21 0.89 8.3e+03 -3.0 0.5 1 7 349 354 348 356 0.49 9 21 1e-07 0.00097 19.2 11.8 1 18 359 376 359 377 0.96 10 21 0.7 6.5e+03 -2.7 0.4 1 5 386 390 386 395 0.73 11 21 0.022 2e+02 2.2 15.9 1 18 411 428 411 429 0.94 12 21 3.3e-08 0.00031 20.7 14.7 1 19 438 456 432 456 0.90 13 21 0.37 3.4e+03 -1.8 1.1 6 10 484 488 483 488 0.92 14 21 0.00011 1 9.5 7.9 10 18 502 510 500 511 0.93 15 21 0.012 1.1e+02 3.0 6.1 1 11 523 532 523 533 0.95 16 21 0.78 7.3e+03 -2.8 1.0 1 4 592 595 588 595 0.84 17 21 6.1e-06 0.057 13.5 3.0 1 11 598 608 598 609 0.96 18 21 0.023 2.2e+02 2.1 15.4 3 19 638 654 637 654 0.92 19 21 1.7 1.5e+04 -3.8 1.4 8 13 659 664 658 664 0.73 20 21 1.7e-06 0.016 15.3 12.0 1 16 705 719 705 725 0.92 21 21 0.62 5.7e+03 -2.5 0.5 11 16 755 760 755 761 0.80
Sequence Information
- Coding Sequence
- atggaaaagtttAATAAAGCGCAGGCAAAAAATTTGGCAGCCGCAAAGAAGCTTGTGGATGCATATGCATCCAGCTCAGAGGATGAAGGCGAACTGGATGAAAAACACATACTGGATCTGCTCTACAAACATTATCAAAGCTCGCCGGATAACACAAGCAAACGCAACGACAATGCCAATCGTACGGCTACCTTTCTGGAGAACACCTTGCACTCGGGAGCGGCGACATGTCTCATTTGCATTGGCAGCATTCGGCGCGTGGAGCCGATATGGTCATGCAAATCCTGTTATTGTTTCTTCCATCTGAGGTGCATTCAGCGCTGGGCCAACGATAGCGTCATGCAAATGAAAGTCAAGGCAGAGCAGCAGAATGGCAACCAGGGGCATTACAATCATCTCGGCGAGTTTGTGCCGCCCAAGCGTCCGAAATCGTTGCACTGGTGCTGTCCACAGTGTCGCACAGATTACCAGCCCTCGGATCGACCCACCCAATATGAATGCTTCTGCGGCAAGGAGGTGAACCCGGAGGCGCAACCATTTCTGATTCCGCACTCCTGCGGTGAAATCTGTGGCAAACTGTTGCAGCCGAAATGTGGTCACGACTGTAAGCTACTCTGTCATCCCGGCCCCTGTCCACCGTGCGCCCAACTGGCTCACAATTCCTGCCTCTGCGGCAAGTCGGCACCACGCTCTGTGCGCTGCATAGACAAAAATTGGAAGTGCCAGCAAATATGCCAATCTCTGTTGTCGTGTGGCAAGCACAAGTGCAACCAAAGATGCCATCCACCTGGCCAGTGTCCGCCCTGCAGCAGCAAGAGTGCCCAGCACTGCGATTGCAGACGTGAACAAAAAGTTGTCAACTGTGCGGAGCCCAAATGGAAgtgtaaaaatATTTGTGGTGCTGCTTTTGCCTGTGGTCTGCACAACTGCGATAAGGTGTGCCATGCGGCACCTTGTGGCGGCGGCGAGTGTCCCCTGGGCGTGCGCAGCTGCCCATGTGGCAAGAGCtTGAAAACTGGCGGCTGCAGCGAGGAGCTGGAAACCTGTGGCGACACCTGCCAGAAGCTGTTGTCGTGTGGCAAGCACAGCTGTGCCCAACGCTGCCATCGCGGACCCTGCAATCTGTGCCTGGTGCGCACCAAGAAGCAGTGCCGTTGTGGTCTGCACGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCAACTGCGAAACCAAATGCAAACTGATGCGCGACTGCAACAAGCATGCCTGCAATCGAAAGtgcTGTGGGGATCAGTGTCCTCCGTGCGAGAAGATCTGCGGCAAGCAGCTGAGTTGCAACAAGCACAAGTGTCAATCTGTGTGCCACAATGGACCCTGTTATCCCTGCAAGCTGACATCGCAGGTCAATTGCCGATGTGGCAAGACCCGGCGCAGTGTGCCCTGTGGCAGAGAGAAAAGCGCACGCATTGCCTGCCAGGAGCTATGTCGCGTCACACCCAAATGCCATCATGCCATTAGGCATCGTTGCCACAAGGGCGAGTGTCCACCGTGTGCTCAGCTATGTGGCCTGTTAAATGATACCAGCCGCTGTGGGCACATTTGCAAGTCACGCTGCCACGCAGCCATACGTGTGCTCAAGCCAGCGGATGCAGTGCGCCCGCATGCCAATAAGTATGATTACCGCGCAGAGGCGCATCCGCGCTGCGTGGAGGGTGTTAGCGTCACCTGCATTGGTGGACACGAGGTGGCCACCTGGCCGTGCTGGAACTCCAAGCCGTCGTCCTGCGCCCGTAAATGTGGACGCCACTTGAAGTGTGGCAATCACACTTGTGCACTCTTCTGTCATGCAGTACCCCATCCCGAAGAtatgcagcagcaggcggGCTGTGCTCAATGTGAAAAGGGATGCGCAATTCCACGTCCTACCGGCTGCACACATGCCTGTGCCAAGGGCTGTCATCCGCCGCCCTGTGCGCCCTGCAGTTTTGTGATGAAGAACAAATGCCACTGTGGCCTCAATCAGGTCATCTACAAGTGCAGCGAGTTCTTCAATCAGGAGGGATCTGTGCAGCAGATTGTGGAGCGCCGCCAGAAGTTGTGCAGCTGTGGCAATCGTTGCctcaagaatTTTGCTTGTGGCCATCGCTGCCTGACTATCTGCCATCCCGGACCGTGTCCCAATCCCGAGCTGTGCCGCAAAAAGGTGCGCATTTTTTGTGCCTGCAAGCGCATTAAGCTGGAGATAGCCTGCGACAAGCATCGAGCGGGTCAAACATCCTTAGACTGCGATGGCAACTGCCAAGCGGAACGTTCTAAGGCAGCGGCAACGGAGCAGCAAGAATTGGAGCGCCGAGTGCGGCAGGAGGAGGAAAAGAATCGTCTCGAGCTGGAGAAATTCGAGCAAAAGTTTGGCAAACGTAAGCACAAAGAGCGCAAGACACTCGATGTGGAGCCAACCAAATCCGACATCGACTGGAAACGTTGGGCCATCTGCGCAGTGGCTTTGCTGGCGGTTGTCGGCGCTCTCGCCGTGGCATACTATGCGGACAGTTAA
- Protein Sequence
- MEKFNKAQAKNLAAAKKLVDAYASSSEDEGELDEKHILDLLYKHYQSSPDNTSKRNDNANRTATFLENTLHSGAATCLICIGSIRRVEPIWSCKSCYCFFHLRCIQRWANDSVMQMKVKAEQQNGNQGHYNHLGEFVPPKRPKSLHWCCPQCRTDYQPSDRPTQYECFCGKEVNPEAQPFLIPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHNSCLCGKSAPRSVRCIDKNWKCQQICQSLLSCGKHKCNQRCHPPGQCPPCSSKSAQHCDCRREQKVVNCAEPKWKCKNICGAAFACGLHNCDKVCHAAPCGGGECPLGVRSCPCGKSLKTGGCSEELETCGDTCQKLLSCGKHSCAQRCHRGPCNLCLVRTKKQCRCGLHEKELPCSKEFNCETKCKLMRDCNKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLTSQVNCRCGKTRRSVPCGREKSARIACQELCRVTPKCHHAIRHRCHKGECPPCAQLCGLLNDTSRCGHICKSRCHAAIRVLKPADAVRPHANKYDYRAEAHPRCVEGVSVTCIGGHEVATWPCWNSKPSSCARKCGRHLKCGNHTCALFCHAVPHPEDMQQQAGCAQCEKGCAIPRPTGCTHACAKGCHPPPCAPCSFVMKNKCHCGLNQVIYKCSEFFNQEGSVQQIVERRQKLCSCGNRCLKNFACGHRCLTICHPGPCPNPELCRKKVRIFCACKRIKLEIACDKHRAGQTSLDCDGNCQAERSKAAATEQQELERRVRQEEEKNRLELEKFEQKFGKRKHKERKTLDVEPTKSDIDWKRWAICAVALLAVVGALAVAYYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00535746;
- 90% Identity
- iTF_00517392;
- 80% Identity
- -