Basic Information

Insect: Drosophila kurseongensis
Gene Symbol: -
Assembly: GCA_018153305.1
Location: JAECXX010000210.1:8163298-8169811[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.7e-05 0.0013 19.0 2.1 1 23 221 243 221 243 0.97

2 18 5.7e-06 0.00042 20.6 0.4 1 23 249 271 249 271 0.97

3 18 0.00084 0.062 13.7 0.9 1 23 277 299 277 299 0.95

4 18 1.2e-05 0.00089 19.5 3.1 1 23 305 327 305 327 0.97

5 18 2.7e-05 0.002 18.4 4.7 1 23 333 355 333 355 0.99

6 18 5e-05 0.0037 17.6 5.7 1 23 361 383 361 383 0.97

7 18 2.5e-07 1.8e-05 24.9 4.3 1 23 389 411 389 411 0.98

8 18 8.8e-08 6.5e-06 26.3 2.4 1 23 417 439 417 439 0.97

9 18 5.1e-05 0.0038 17.6 6.7 1 23 480 502 480 502 0.97

10 18 8.9e-05 0.0066 16.8 6.5 1 23 508 530 508 530 0.98

11 18 8e-06 0.00059 20.1 4.5 1 23 536 558 536 558 0.98

12 18 5.8e-06 0.00043 20.5 8.1 1 23 564 586 564 586 0.98

13 18 4.7e-06 0.00035 20.8 7.6 1 23 592 614 592 614 0.97

14 18 5.3e-07 3.9e-05 23.8 7.7 1 23 620 642 620 642 0.98

15 18 0.00016 0.012 16.0 9.5 1 23 648 671 648 671 0.95

16 18 5.8e-05 0.0043 17.4 0.9 1 23 677 699 677 699 0.98

17 18 0.00064 0.047 14.1 3.4 1 23 709 731 709 731 0.97

18 18 7.3e-06 0.00054 20.2 1.6 1 23 737 760 737 760 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.7e-05	0.0013	19.0	2.1	1	23	221	243	221	243	0.97
2	18	5.7e-06	0.00042	20.6	0.4	1	23	249	271	249	271	0.97
3	18	0.00084	0.062	13.7	0.9	1	23	277	299	277	299	0.95
4	18	1.2e-05	0.00089	19.5	3.1	1	23	305	327	305	327	0.97
5	18	2.7e-05	0.002	18.4	4.7	1	23	333	355	333	355	0.99
6	18	5e-05	0.0037	17.6	5.7	1	23	361	383	361	383	0.97
7	18	2.5e-07	1.8e-05	24.9	4.3	1	23	389	411	389	411	0.98
8	18	8.8e-08	6.5e-06	26.3	2.4	1	23	417	439	417	439	0.97
9	18	5.1e-05	0.0038	17.6	6.7	1	23	480	502	480	502	0.97
10	18	8.9e-05	0.0066	16.8	6.5	1	23	508	530	508	530	0.98
11	18	8e-06	0.00059	20.1	4.5	1	23	536	558	536	558	0.98
12	18	5.8e-06	0.00043	20.5	8.1	1	23	564	586	564	586	0.98
13	18	4.7e-06	0.00035	20.8	7.6	1	23	592	614	592	614	0.97
14	18	5.3e-07	3.9e-05	23.8	7.7	1	23	620	642	620	642	0.98
15	18	0.00016	0.012	16.0	9.5	1	23	648	671	648	671	0.95
16	18	5.8e-05	0.0043	17.4	0.9	1	23	677	699	677	699	0.98
17	18	0.00064	0.047	14.1	3.4	1	23	709	731	709	731	0.97
18	18	7.3e-06	0.00054	20.2	1.6	1	23	737	760	737	760	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCTAGCTCGGTGCCATCGGTTGTAGCCCCTGTAGTGACCACTGGTGGGACGACGATCACCTTGGGCGGCCCACCGCACCTCCCCAAATCGGAGCACAAAGAGGATGGCAAGCCACCGCACGGCATTGAAATGTACAAGGTGAACATCGAGGACATTTCGCAGCTCTTCACCTACCACGAGGTCTTTGGCAAGATCCACGGCGATGTGGTCAACCATCAGTTGGCGGCGGCCCACGGAGGTCAGCTGCCACCACCTCCGCCGCTGCCGCCGCAGGTCACCAGTCATGCGGCAAGTGCGGCGGCAGCCGCAGCAGCAGCGTCTACCAACAACGCCGCCGTAGCAGCGGTAATGGCCTCAGCGAATGCGGCAGCGGCCGCGGCGGCAGCAGCATCGGCGGCGGGCGTCGGAGGACTACCGCCGGCCACCAGCGGCAATGGGGGCCAGCAGGTGACGGTGACGACGACCAGCAGCTCGACGAGCAGCGGCGGGAGCACCACCAGTGGGGGCACCACGACCACGGCGGGTGAGTTGCTTTTGCCTAAAATGGAGGGCGGCATTCATGGCGTGGACGGCAGCGGCAATGGCGGCGGCGGGCAGAACGTGGCGCTGGCGCCGGACGGGACGCCCATTGCGACGGGGACGCACGTCTGCGACATCTGCGGCAAGATGTTCCAGTTCCGGTACCAGCTGATCGTGCACCGGCGCTACCACAGCGAACGGAAGCCGTTCATGTGCCAGGTGTGCGGCCAGGGGTTCACCACGTCGCAGGATCTGACGCGCCATGGCAAGATCCACATTGGCGGGCCCATGTTCACCTGCATCGTGTGCTTCAATGTGTTCGCGAACAATACGAGCCTGGAGCGGCACATGAAACGGCACTCGACGGACAAACCGTTCGCCTGCACCATTTGCCAAAAGACCTTTGCCCGCAAAGAGCATCTGGACAATCACTTCCGCTCGCACACGGGCGAAACGCCCTTCCGTTGCCAGTACTGCGCCAAGACGTTCACGCGCAAGGAGCACATGGTCAACCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTTACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACGCCGCACCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCACCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAGATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCTAGCCCATACCATGACCGCCCCCTGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGCAGGCGAGACGCCGCACCGGTGCGACTTCTGCTCCAAGACGTTTACGCGCAAGGAGCACTTGCTAAACCACGTGCGCCAGCACACGGGAGAGTCGCCACACCGCTGCTCCTACTGCATGAAGACGTTCACGCGCAAGGAGCACCTGGTCAACCACATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACGCGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAGTCGCCGCACAAGTGCACGTACTGCACTAAGACGTTCACGCGCAAGGAGCACCTGACGAACCATGTGCGCCAGCACACGGGCGACTCCCCGCACCGATGCTCCTATTGCAAGAAGACGTTTACGCGGAAGGAGCACCTGACGAACCATGTGCGCCTCCACACGGGCGACTCGCCGCACAAGTGCGAGTACTGCCAGAAGACGTTTACGCGGAAGGAGCACCTCAACAACCACATGCGCCAGCACTCGAGCGACAATCCGCACTGCTGCAACGTCTGCAACAAACCGTTCACGCGCAAGGAGCACCTGATCAACCACATGTCGCGGTGCCACACCGGCGACCGGCCCTTCACCTGCGAGACGTGCGGCAAGTCGTTCCCGCTCAAGGGCAACCTGCTCTTCCACCAGCGCAGCCACACCAAGGGCCAGGAGATGGAGCGGCCCTTCGCCTGCGAAAAGTGCCCCAAGAACTTTATCTGCAAAGGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACTCTGTGCAGCAAGGCGTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCGTGCATCCGCATCCGCAAATACCGGCTGGTGTGCTGACGCAAGTCAAGCAGGAAGTGAAACCGATCATAATAGCCCCTCCTGCACGGCTACACTCCCACCACAGCCCACTCCAGCAGCACGACCAGCACCTCGATAGCCGCCACAGCGGCCACCGCGTCGACGCAAGCGGCGTGGTGAGGCCAGCGTGCCACCAGTGA
Protein Sequence: MQHVSAASSVPSVVAPVVTTGGTTITLGGPPHLPKSEHKEDGKPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHQLAAAHGGQLPPPPPLPPQVTSHAASAAAAAAAASTNNAAVAAVMASANAAAAAAAAASAAGVGGLPPATSGNGGQQVTVTTTSSSTSSGGSTTSGGTTTTAGELLLPKMEGGIHGVDGSGNGGGGQNVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTASPYHDRPLFXXXXXXXXXXXXXXXXXXXXXXXQAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIAPPARLHSHHSPLQQHDQHLDSRHSGHRVDASGVVRPACHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00062983; iTF_00588971; iTF_00617035; iTF_00617774; iTF_00492359; iTF_00919214; iTF_01319183; iTF_00483856; iTF_00916400; iTF_00485269; iTF_00336928; iTF_00338556;
90% Identity: iTF_00507738;
80% Identity: -