Dbor014725.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila borealis
Gene Symbol
ttk
Assembly
GCA_035045885.1
Location
JAWNOR010000285.1:545982-549723[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.4e-19 1.2e-15 57.2 0.0 2 45 603 647 602 647 0.97

Sequence Information

Coding Sequence
ATGTCTGTGCAGCAGTTCTGCCTGCGCTGGAACAATCACCAGCCAAACTTCATATCCGTCTGCTCTTCCCTGCTGCATAATGGGACGCTGGTGGACGTCACGCTTGCCGCGGAGGGCCGTCAACTGCAGGCCCATAAAATAGTGCTCTCCGCGTGCAGCTCGTACTTTCAGGCGCTATTTACGACGAATCCGTGCCAGCATCCGATTGTCATACTGAAGGACGTGCAGTACGATGATCTCAAGACAATGGTGGATTTTATGTACTACGGCGAGGTGAATGTGTCGCAGGAGCAACTGCCGCACATACTCAAAACGGCCGAGATGCTCAAGATAAAGGGCCTGGCCGAGATGCCCACGGATCCGGCCAACCTCACCAAGTCCGACAGCAAGTCCTCCAGCGAGGCCGCCGAGCTGCTTGGACAAGCTGGCGCCAATGTTGCTGGCACTAACGCTGGTGTGGCCGCTCCAAGTCTGGGAGCAGCTAGCGGTAGCAGCAGTGCCGGCGACTCGCTTTGGAGTAGCAGTGAGGCGCAGCAGTTtcagcagcatcatcagcaacagctacagcaacaactgcagcagcagcaggcgcaacaacagcagcaggctcaacaacaacagcagcagcaacaacagcaacagcagcagcaacaacaacagcagcagcagcaacaacaacaacaacagcagcagcagcagcatcatcaccaccatcatcatcaccaaccacaacaacagcagggcAGCCAAGCGCAAGGTTCGCAGacgcatcatcatcagctgAGGCGAACGCCATCACCGCTAAGTGCTGGCACCTCGCCGGCCACACGGCGCAAGCGCTTGCGAAAATCCTCAAATAACGGCTCTGGTGATCGAAACAACTCGGAGGAGCAGCATAACAGCTCCTTGGATGCAGCTGGCGCCGCTGGTAATGCTGCTGGCCTAAGTCTACAACAGATGAGTCAAATGTCTTTTGGCGGTGGAGCCGGCAGCAATTCGACCGCGGCACTGGGCAGCCTCTCGGGCCACTCGATGCATGCTGCCAAACTACTGAAAGAATCGGCGAGCAATGAGCTAGAGCAGCAGCCACAGGACTCGGATCTGGACGACGCTCACgggcacatacatatgcaaattAAACCCGAAGTGGACATCGGCAGTGTGAATCAGTCGATGCCTCTGGACATTTCTGGCACCACAACACCATCGGAACACGACGCACCCAATTCACAGTCATCACACTCTGGTCTGCAGTGGACAGTTGTTGATTCAAACTATTCGCGCTTCTCGATGCCCGCTTGTCAGTCCAACTTGattggcaatggcaacggcgGCAATCAAAACAGCGGCGCGAATAGCAGTGCCGGCGTTGGTGCCGCCGGCACCAACGATcagcgccaacagcagcagcacgaagCCCAGCAGCAGgccacgcagcagcagcaacaacagcatctgcagcagctgcactaccaacagcagcaacagcaacaacaacagggcGCTACGGCTGGTCAGGCGTACTCGTCGCAAATCATAACCGTGAATAATTTGGTCAGCGGCTATGCAACGGCAGCGCAAAATTTGTCACCCACGTCACCCAACGAGTCCAATATGGTGCAGTCTGTTTACAGTCAGGGGCCGACGCCCACACAGTCGCCGGTGCACTCTGGTGtgggcggtggcggcggcggtagCAGCGCGGGTGGAAGTGCGGGCAGcgcaggcggcggcggcaataGCAGCAGTGGTGGAGGGGGCAGCAGTCAAGTGGTGAAGCGCAAGCGATCGGTCAACCCGCAAGGTGATGAGAATTTCATTCGGGCTCTAGAAGCGGTACGCACCGGTGGCATCGGATTCTGCAAAGCTGCTCGACTGTACGGCGTGAACAATCGCACTCTCTGGCTGGAGTACAAGAAACGCGGCTACCCGGTGTCGAGGCCCAGCATTAAGGCGCGCGTGGTCAAGCAGGAGCCAAACCTTTCGCCCTCGCCAACACCATCAACAAATCCCGGCGACGATACAACCAACGAAACATATGATCATCTGACagcagctgccgttgccgcGGCCCAAACGGCTGCGCTCAACATGCAGATACCGCCACAAGCGGAGACGCCGACGCCATCGCTGATGTGCACTCCACATCATGCCAGCGCCGCGGCGGCTACTACAGCCGGTGGCACTAACACGCATCCAGCCATCGGCGTTATGAGCCTCTTCGATGCACGCTACATGGACTCACCGACAAACGTGCACACGATGTCCCGGCAGCGATATATCGATGCGACGGGTGCCGGTGCAGCCGCCGCTGCCTCGGGGGCGGGCACGATCAACGTAAATCCGGCCGCCGCCATGAATCTACAGAGTATTAACTTCAACTCAATATAG
Protein Sequence
MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSSEAAELLGQAGANVAGTNAGVAAPSLGAASGSSSAGDSLWSSSEAQQFQQHHQQQLQQQLQQQQAQQQQQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHQPQQQQGSQAQGSQTHHHQLRRTPSPLSAGTSPATRRKRLRKSSNNGSGDRNNSEEQHNSSLDAAGAAGNAAGLSLQQMSQMSFGGGAGSNSTAALGSLSGHSMHAAKLLKESASNELEQQPQDSDLDDAHGHIHMQIKPEVDIGSVNQSMPLDISGTTTPSEHDAPNSQSSHSGLQWTVVDSNYSRFSMPACQSNLIGNGNGGNQNSGANSSAGVGAAGTNDQRQQQQHEAQQQATQQQQQQHLQQLHYQQQQQQQQQGATAGQAYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGGGGGSSAGGSAGSAGGGGNSSSGGGGSSQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTNETYDHLTAAAVAAAQTAALNMQIPPQAETPTPSLMCTPHHASAAAATTAGGTNTHPAIGVMSLFDARYMDSPTNVHTMSRQRYIDATGAGAAAAASGAGTINVNPAAAMNLQSINFNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00535233; iTF_00527970; iTF_00548880; iTF_00548728; iTF_00525049; iTF_00805890; iTF_00552227; iTF_00495781; iTF_00538152; iTF_00545160; iTF_00582184; iTF_00509738; iTF_00509889; iTF_00546572; iTF_00901421; iTF_00502446; iTF_00568174; iTF_00506031; iTF_00599503; iTF_00599662; iTF_01556047; iTF_01556196; iTF_00516178; iTF_00516914; iTF_00517057; iTF_00619762; iTF_01325586; iTF_01325740; iTF_00551507; iTF_00832243; iTF_00832076; iTF_00804468; iTF_00804308; iTF_01570164; iTF_00476545; iTF_00540290; iTF_00597282; iTF_00512644; iTF_00513381; iTF_00500230; iTF_00496519; iTF_00498792; iTF_00482154; iTF_00482310; iTF_00576267; iTF_00576419; iTF_00802764; iTF_00802923; iTF_00522093; iTF_00609966; iTF_00609802; iTF_01327086; iTF_01327239; iTF_00570320; iTF_00805106; iTF_00805261; iTF_00573971; iTF_00560180; iTF_00485783; iTF_00583031; iTF_00582883; iTF_01356055; iTF_01356204; iTF_00558584; iTF_00593016; iTF_00521273; iTF_00566713; iTF_00567609; iTF_00567458; iTF_00616121; iTF_00497306; iTF_01549499; iTF_01549642; iTF_00501726; iTF_00501875; iTF_00564574; iTF_00532448; iTF_00532295; iTF_00559413; iTF_01326485; iTF_01326316; iTF_00495032; iTF_00557129; iTF_00596008; iTF_00606986; iTF_00498220; iTF_00542510; iTF_00499508; iTF_00557272; iTF_00498073; iTF_00576985; iTF_00542362; iTF_00518364; iTF_00595871; iTF_00803672; iTF_00803523; iTF_00336825; iTF_00336651; iTF_00573241; iTF_00598073; iTF_00339066; iTF_00472987; iTF_01321115; iTF_00530876; iTF_00511197; iTF_00543666; iTF_00526653; iTF_00526500; iTF_01320541; iTF_01320389; iTF_01327966; iTF_01327812; iTF_00493567; iTF_00493725; iTF_00544415; iTF_00572672; iTF_00572519;
90% Identity
iTF_00530876;
80% Identity
-