Dbas000844.2
Basic Information
- Insect
- Drosophila basisetae
- Gene Symbol
- ttk
- Assembly
- GCA_035041595.1
- Location
- JAWNLB010000020.1:2723812-2727996[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-19 8.9e-16 57.2 0.0 2 45 615 659 614 659 0.97
Sequence Information
- Coding Sequence
- ATGTCTGTGCAGCAGTTCTGCCTGCGCTGGAACAATCACCAGCCCAACTTTATATCGGTCTGCTCATCCCTTCTGCACAATGGGACGCTAGTCGATGTCACGCTCGCAGCGGAGGGCCGCCAGCTGCAGGCCCACAAAATTGTCCTCTCCGCGTGCAGTTCTTACTTTCAGGCGCTTTTTACAACGAATCCGTGCCAGCATCCGATTGTCATACTGAAGGACGTGCAGTACGATGATCTTAAGACGATGGTGGATTTCATGTACTACGGCGAGGTGAATGTGTCACAGGAACAACTGCCGCACATTCTGAAAACGGCGGAAATGCTCAAGATCAAGGGCCTGGCCGAAATGCCCACTGATCCAGCCAACCTCACCAAGTCCGACAGCAAATCGTCCAGCGAGGCGACCGAGTTGCTCGGTCAGGCTGGCGCCAATGTGTCTGGcactggtgctggtgctgcagcgTCTAGTCTGGGAgcagccagcggcagcagcagtgctgGCGATTCGCTTTGGAGCAGCAGTGAGGCGCAGCAATttcagcagcatcatcaacaacagctacagcaacaactgcagcagcaacagcagcaggcacaacagcagcaacaacaggcgcaacagcaacaacaacagcagcagcagcaggcgcaacaacaacaacagcagcaacaacaacaacagcagcaacagcatcatcatcaccatcatcatcaccaagcacaacagcaacaacaacagcagcagcaaggggGCAGCCAAGCGCAGGGTTCGCAGACGCATCACCATCAGCTAAGGCGAACGCCATCGCCGCTAAGTGCTGGCACCTCCCCGGCCACGCGGCGCAAGCGCTTGCGTAAATCCTCAAATAACGGTTCTGGTGATCGCAACAACTCGGAGGAGCAGCACAGCAGCTCACTTGATGCAACTGGCGCcgctggcagcgctgctggACTGAGTCTGGCACAGATGAGTCAAATGTCGTTTGGCGGTGGAGCGGGTAATAATTCGAATGCAGCACTTGGTAACCTCGCGGGACACTCGATGCATGCCTCCAAGCTGCTGAAGGAGTCAGCGAACACTGAGCTAGAGCAACAGCCGCAGGATTCGGATCTGGACGATGCTCAcggacacatacatatgcaaattAAGCCGGAGGTGGACATCGGCAGTGTGAATCAAACGATGCCACTGGACATTTCTGGCACCACAACACCATCGGAACACGACGCGCCCAATTCACAATCGTCGCACTCTGGTCTGCAGTGGACAGTTGTTGATTCAAACTATTCGCGCTTTTCgatgcctgcctgccagtcaAATTTgattggcaatggcaacggcaacggcaatcAAAACAGCGCCGCGAATAGCAATGCCGGCGTCGGTACCGCCGGCACCACCGCCGACcagcgccaacagcagcagcagcagcacgaagCTCAGCAGCAGgcgacacagcagcagcaacaacagcatctgcagcagctgcactatcagcagcagcagcagcaacaacaacagcagcaacagggcGCCACAGCTGGTCAGTCGTACTCGTCGCAAATCATAACCGTAAATAATCTGGTCAGCGGGTATGCAACGGCCGCTCAAAATCTATCGCCCACATCGCCCAACGAGTCCAATATGGTGCAGTCCGTCTACAGTCAGGGTCCAACACCCACACAGTCGCCTGTCCACTCCGgcgttggcggcggcggcggcagcagtgcGGGTGGAAGTGCGGGCAGtgctggcggcggtggcggcaatagcagcagtggtggtggcggtAGCAGCAGTCAAGTGACCAAACGCAAGCGATCCGTAAATCCCCAGGGCGATGAGAATTTCATCAGGGCATTGGAAGCGGTGCGCACCGGCGGCATCGGATTCTGCAAGGCTGCTCGCCTCTACGGCGTGAACAATCGCACCCTTTGGCTGGAGTACAAGAAACGCGGCTATCCGGTGTCGAGACCGAGCATAAAGGCGCGCGTCGTCAAACAGGAGCCGAATCTATCGCCATCGCCCACACCATCCACAAATCCCGGCGACGATACGACCAACGAAACATATGATCATCTAACCGCTGCAGCCGTTGCCGCAGCACAAACGGCTGCGCTCAACATGCAGATACCGCCGCAGACGGAGACGCCGACGCCATCGCTGATGTGCGCGCCGCATCATGCGAGCGCAGGAGCGACCACCTCAGCCGGTGGGGCCAACACGCATCCGACCATCGGCGTGATGAGCCTCTTCGATGCCCGCTACATGGACTCACCGGCCAGCGTGCACACCATGTCCCGGCAGAGGTATATCGATGCGACGGGCGCcggtgcagctgctgcagcgtcgGGAGCGGGCACAATCAATGTTAATCCGGCCGCTGCAATGAATCTACAGAGTATTAACTTCAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSSEATELLGQAGANVSGTGAGAAASSLGAASGSSSAGDSLWSSSEAQQFQQHHQQQLQQQLQQQQQQAQQQQQQAQQQQQQQQQQAQQQQQQQQQQQQQQHHHHHHHHQAQQQQQQQQQGGSQAQGSQTHHHQLRRTPSPLSAGTSPATRRKRLRKSSNNGSGDRNNSEEQHSSSLDATGAAGSAAGLSLAQMSQMSFGGGAGNNSNAALGNLAGHSMHASKLLKESANTELEQQPQDSDLDDAHGHIHMQIKPEVDIGSVNQTMPLDISGTTTPSEHDAPNSQSSHSGLQWTVVDSNYSRFSMPACQSNLIGNGNGNGNQNSAANSNAGVGTAGTTADQRQQQQQQHEAQQQATQQQQQQHLQQLHYQQQQQQQQQQQQGATAGQSYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGGGGSSAGGSAGSAGGGGGNSSSGGGGSSSQVTKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTNETYDHLTAAAVAAAQTAALNMQIPPQTETPTPSLMCAPHHASAGATTSAGGANTHPTIGVMSLFDARYMDSPASVHTMSRQRYIDATGAGAAAAASGAGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00490703;
- 90% Identity
- iTF_00606986;
- 80% Identity
- -