Dlac013752.2
Basic Information
- Insect
- Drosophila lacicola
- Gene Symbol
- ttk
- Assembly
- GCA_035045355.1
- Location
- JAWNPB010000287.1:132645-136397[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-19 1.1e-15 57.2 0.0 2 45 604 648 603 648 0.97
Sequence Information
- Coding Sequence
- ATGTCTGTGCAGCAGTTCTGCCTGCGCTGGAACAATCACCAGCCAAACTTCATATCCGTCTGCTCTTCCCTGCTGCATAATGGGACGCTGGTGGACGTCACGCTTGCCGCGGAGGGCCGTCAACTGCAGGCCCATAAAATAGTGCTCTCCGCGTGCAGCTCGTACTTTCAGGCGCTATTTACGACGAATCCGTGCCAGCATCCGATTGTCATACTGAAGGACGTGCAGTACGATGATCTCAAGACAATGGTGGATTTTATGTACTACGGCGAGGTGAATGTGTCGCAGGAGCAACTGCCGCACATACTCAAAACGGCCGAGATGCTCAAGATAAAGGGCCTGGCCGAGATGCCCACGGATCCGGCCAACCTCACCAAGTCCGACAGCAAGTCGTCCAGCGAGGCCGCCGAGCTGCTTGGACAAGCTGGCGCCAATGTTGCTGGCACTAACGCTGGTGTGGCCGCTCCAAGTCTGGGAGCAGCTAGCGGTAGCAGCAGTGCCGGCGACTCGCTTTGGAGTAGCAGCGAGGCGCAGCAGTttcagcagcatcatcagcaacagctacagcaacaactgcagcagcagcaggcgcaacaacagcagcaggctcaacaacaacagcagcagcaacaacagcaacagcagcagcaacaacaacagcagcaacaacaacaacaacaacagcagcagcagcatcatcaccatcatcatcatcaccaaccacaacaacagcagggcAGCCAAGCGCAGGGTTCGCAGacgcatcatcatcagctgaGGCGAACGCCATCACCGCTAAGTGCTGGCACCTCGCCGGCCACACGGCGCAAGCGCTTGCGAAAATCCTCAAATAACGGCTCTGGTGATCGAAACAACTCGGAGGAGCAGCATAACAGCTCCTTGGATGCAGCTGGCGCCGCTGGTAATGCTGCTGGCATAAGTCTGGCACAGATGAGTCAAATGTCTTTTGGCGGTGGAGCCGGCAGCAATTCGACCGCGGCACTGGGCAGCCTCTCGGGCCACTCGATGCATGCTGCCAAACTACTGAAAGAATCGGCGAGCAATGAGCtagagcagcagccgcaggacTCGGATCTGGACGACGCTCACgggcacatacatatgcaaattAAACCCGAAGTGGACATCGGCAGTGTGAATCAGTCGATGCCTCTGGACATTTCTGGCACCACGACACCATCGGAACACGACGCACCCAATTCACAGTCATCACACTCTGGTCTGCAGTGGACAGTTGTTGATTCAAACTATTCGCGCTTCTCGATGCCCGCTTGTCAGTCCAACTTgattggcaatggcaacggcggCAATCAAAACAGCGGCGCGAATAGCAGTGCCGGCGTTGGTTCCGCCGGCACCAACGATcagcgccaacagcagcagcaacagcagcacgaagcccagcagcaggccacgcagcagcagcaacaacagcatctgcagcagctgcactaccaacagcagcaacagcaacaacaacagggcGCTACGGCTGGTCAGGCGTACTCGTCGCAAATCATAACCGTGAATAATTTGGTCAGCGGCTATGCAACGGCAGCGCAAAATTTGTCACCCACGTCACCCAACGAGTCCAATATGGTGCAGTCTGTTTACAGTCAGGGGCCGACGCCCACACAGTCGCCGGTGCACTCTGGTGTgggcggtggcggcggtggtAGCAGCGCGGGTGGAAGTGCGGGCAgcgcaggcggcggcggcaatagCAGCAGTGGTGGAGGGGGCAGCAGTCAAGTGGTGAAACGCAAGCGATCGGTAAACCCGCAGGGTGATGAGAATTTCATTCGGGCTCTGGAAGCGGTACGTACCGGTGGCATCGGATTCTGCAAAGCTGCTCGACTGTACGGCGTGAACAATCGCACTCTCTGGCTGGAGTACAAGAAACGCGGCTACCCGGTGTCGAGGCCTAGCATTAAGGCGCGCGTGGTCAAGCAGGAGCCAAACCTTTCGCCCTCGCCAACACCATCAACGAATCCCGGCGACGATACGACCAACGAAACATATGATCATCTAACggcagctgccgttgccgcgGCCCAAACGGCTGCGCTCAACATGCAGATACCGCCACAAGCGGAGACGCCGACGCCATCGCTGATGTGCACTCCACATCATGCCAGCGCCGCGGCGGCCACTACAGCCGGTGGCACTAACACGCATCCAGCCATCGGCGTTATGAGCCTCTTCGATGCACGCTACATGGACTCACCGACAAACGTGCACACGATGTCTCGGCAGCGATATATCGATGCGACGGGTGCCGGTGCAGCCGCCGCTGCCTCGGGGGCGGGCACGATCAACGTAAATCCGGCCGCCGCCATGAATCTACAGAGTATTAACTTCAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSSEAAELLGQAGANVAGTNAGVAAPSLGAASGSSSAGDSLWSSSEAQQFQQHHQQQLQQQLQQQQAQQQQQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHQPQQQQGSQAQGSQTHHHQLRRTPSPLSAGTSPATRRKRLRKSSNNGSGDRNNSEEQHNSSLDAAGAAGNAAGISLAQMSQMSFGGGAGSNSTAALGSLSGHSMHAAKLLKESASNELEQQPQDSDLDDAHGHIHMQIKPEVDIGSVNQSMPLDISGTTTPSEHDAPNSQSSHSGLQWTVVDSNYSRFSMPACQSNLIGNGNGGNQNSGANSSAGVGSAGTNDQRQQQQQQQHEAQQQATQQQQQQHLQQLHYQQQQQQQQQGATAGQAYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGGGGGSSAGGSAGSAGGGGNSSSGGGGSSQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTNETYDHLTAAAVAAAQTAALNMQIPPQAETPTPSLMCTPHHASAAAATTAGGTNTHPAIGVMSLFDARYMDSPTNVHTMSRQRYIDATGAGAAAAASGAGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00490703;
- 90% Identity
- iTF_00476545; iTF_00540290; iTF_00805890; iTF_00512644; iTF_00495781; iTF_00538152; iTF_00545160; iTF_00582184; iTF_00509738; iTF_00509889; iTF_00546572; iTF_00802764; iTF_00802923; iTF_00502446; iTF_00568174; iTF_00490703; iTF_00506031; iTF_00599503; iTF_00599662; iTF_01556047; iTF_01556196; iTF_00516178; iTF_00805106; iTF_00805261; iTF_00551507; iTF_00559413; iTF_01326485; iTF_01326316; iTF_01356055; iTF_01356204; iTF_00803672; iTF_00803523; iTF_00567609; iTF_00567458; iTF_00573241; iTF_00598073; iTF_00472987; iTF_01321115; iTF_01549499; iTF_01549642; iTF_00526653; iTF_00526500; iTF_01320541; iTF_01320389; iTF_01327966; iTF_01327812; iTF_00493567; iTF_00493725; iTF_00544415; iTF_00532448; iTF_00532295; iTF_00572672; iTF_00572519;
- 80% Identity
- -