Dkok006220.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila kokeensis
Gene Symbol
ttk
Assembly
GCA_035042145.1
Location
JAWNLT010000263.1:7096351-7100397[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.1e-19 9.6e-16 57.2 0.0 2 45 614 658 613 658 0.97

Sequence Information

Coding Sequence
ATGTCTGTGCAGCAGTTCTGTCTGCGCTGGAACAATCACCAGCCCAACTTCATATCGGTCTGCTCATCCCTGCTGCACAATGGGACGCTAGTCGATGTCACGCTCGCCGCGGAGGGCCGCCAGCTGCAGGCCCACAAAATTGTGCTCTCCGCGTGCAGCTCTTACTTTCAGGCGCTCTTTACAACGAATCCCTGCCAGCATCCGATTGTCATACTGAAGGACGTGCAGTACGATGATCTCAAGACGATGGTGGATTTCATGTACTATGGCGAGGTGAATGTGTCGCAGGAGCAACTGCCGCATATTCTGAAAACGGCCGAGATGCTCAAGATCAAGGGCCTGGCCGAAATGCCCACTGATCCGGCCAACCTCACCAAGTCCGACAGTAAATCCTCCAGCGAGGCGACCGAGTTGCTCGGTCAGGCTGGCGCTAATGTGGCCGGCACTGGTGCTGGCGCTGCAGCGTCTAGTCTGGGTGCAGCCAGCGGCAGTAGCAGTGCTGGCGATTCTCTTTGGAGCAGTAGCGAGGCACAGCAAtttcagcatcatcagcaacagctgcagcaacaactgcaacagcagcaggcgcaacagcagcaacaacaacaacaacaggcgcaacaacaacaacaacaacagcagcaggcgcaacaacaacagcagcagcagcagcaacaacaacagcagcaacagcatcatcatcaccatcatcatcaccaagcacaacagcaacaacaacagcagcagcaaggggGCAGCCAAGCACAGGGTTCGCAGACGCATCACCATCAGCTGAGGCGAACGCCATCGCCGCTGAGTGCTGGCACCTCGCCGGCCACGCGGCGCAAGCGCTTGCGTAAATCCTCGAATAACGGTTCTGGTGATCGCAACAACTCAGAGGAGCAGCATAGCAGCTCACTGGATGCAACTGGCGCcgctggcaacgctgctgGGCTGAGTCTGGCACAGATGAGTCAAATGTCGTTTGGCGGTGGGGCGGGTAATAATTCGACTGCAGCACTGGGCAGCCTCGCAGGGCACTCGATGCATGCCTCCAAGCTGCTGAAGGAGTCAGCGAACACTGAGCTAGAGCAACAGCCGCAGGACTCGGATCTGGACGATGCTCAcggacacatacatatgcaaattAAGCCGGAGGTGGACATCGGCAGTGTGAATCAAACGATGCCCCTGGACATTTCTGGCACTACAACACCATCGGAGCACGACGCGCCCAATTCACAATCGTCGCACTCTGGTCTGCAATGGACAGTTGTTGATTCAAACTATTCGCGCTTTTCGATGCCCGCCTGCCAGTCCAATTtgattggcaatggcaatggcaacggcaatcAAAACAGCGCCACGAATAGCAATGCCGGCGTCGGTACCGCCGGCACCACCGCGGACcagcgtcaacagcagcagcagcacgaagctcagcagcaggcgacgcagcagcagcaacaacagcatctgcagcagctgcactatcagcagcagcagcaacaacaacagcagcaacagggcGCCACAGCTGGTCAGGCGTACTCGTCGCAAATTATAACCGTAAATAATCTGGTCAGCGGGTATGCAACGGCCGCCCAAAATCTATCGCCAACATCGCCCAATGAGTCCAATATGGTGCAGTCCGTCTATAGTCAGGGTCCGACGCCCACACAATCGCCTGTCCACTCTGGCGtgggcggtggcggcggcagcagtgcGGGTGGAAGTGCGGGCAGTGCTGggggcggcggcggtggcaatagcagcagcggcggtggcggcagtAGCAGTCAAGTGACCAAACGCAAGCGATCCGTAAATCCCCAGGGCGATGAGAATTTCATCAGGGCATTAGAAGCGGTGCGCACCGGCGGCATCGGATTCTGCAAGGCAGCTCGCCTCTACGGCGTGAACAATCGCACGCTTTGGCTGGAGTACAAGAAGCGCGGTTATCCGGTGTCTAGACCGAGCATTAAGGCGCGCGTCGTCAAACAGGAACCGAATCTATCGCCCTCGCCCACACCATCCACAAATCCCGGCGACGATACGACCAACGAAACATATGATCATCTAAccgctgcagctgttgcagcacaAACGGCTGCGCTCAACATGCAGATACCGCCGCAGACGGAGACGCCGACGCCATCGCTGATGTGCACGCCGCATCATGCGGGTGCAGGAGCGGCTACCTCTGCCGGTGGGGCCAACACGCATCCGACCATCGGCGTGATGAGCCTCTTCGATGCCCGCTACATGGACTCACCGGCCAGCGTGCACACCATGTCCCGGCAGCGGTATATCGATGCGACGGGCGCcggtgcggctgctgcagcgtcGGGAGCGGGCACAATCAATGTTAATCCGGCCGCTGCAATGAATCTACAGAGTATTAACTTCAACTCAATATAG
Protein Sequence
MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSSEATELLGQAGANVAGTGAGAAASSLGAASGSSSAGDSLWSSSEAQQFQHHQQQLQQQLQQQQAQQQQQQQQQAQQQQQQQQQAQQQQQQQQQQQQQQQHHHHHHHHQAQQQQQQQQQGGSQAQGSQTHHHQLRRTPSPLSAGTSPATRRKRLRKSSNNGSGDRNNSEEQHSSSLDATGAAGNAAGLSLAQMSQMSFGGGAGNNSTAALGSLAGHSMHASKLLKESANTELEQQPQDSDLDDAHGHIHMQIKPEVDIGSVNQTMPLDISGTTTPSEHDAPNSQSSHSGLQWTVVDSNYSRFSMPACQSNLIGNGNGNGNQNSATNSNAGVGTAGTTADQRQQQQQHEAQQQATQQQQQQHLQQLHYQQQQQQQQQQQGATAGQAYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGGGGSSAGGSAGSAGGGGGGNSSSGGGGSSSQVTKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTNETYDHLTAAAVAAQTAALNMQIPPQTETPTPSLMCTPHHAGAGAATSAGGANTHPTIGVMSLFDARYMDSPASVHTMSRQRYIDATGAGAAAAASGAGTINVNPAAAMNLQSINFNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00490703;
90% Identity
iTF_00606986;
80% Identity
-