Dtri002823.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila trichaetosa
Gene Symbol
ttk
Assembly
GCA_035043205.1
Location
JAWNNE010000074.1:6692108-6696201[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.1e-19 9.8e-16 57.2 0.0 2 45 616 660 615 660 0.97

Sequence Information

Coding Sequence
ATGTCTGTGCAGCAGTTCTGCCTGCGCTGGAACAATCACCAGCCCAACTTCATATCGGTCTGCTCATCCCTGCTGCACAATGGGACGCTAGTCGATGTCACGCTCGCCGCGGAGGGCCGCCAGCTGCAGGCCCACAAAATTGTGCTCTCCGCGTGCAGCTCTTACTTTCAGGCGCTATTTACAACGAATCCGTGCCAGCATCCGATTGTCATACTGAAGGACGTGCAGTACGATGATCTCAAGACGATGGTGGATTTCATGTACTACGGCGAGGTGAATGTGTCGCAGGAGCAACTGCCGCACATTCTGAAAACGGCTGAGATGCTCAAGATCAAGGGCCTGGCCGAAATGCCCACTGATCCGGCCAACCTCACCAAGTCCGACAGTAAATCCTCCAGCGAGGCGACCGAGTTGCTCGGTCAGGCTGGCGCCAACGTGGCCGGcactggtgctggtgctgcagcgTCTAGTCTGAGTgcagccagcggcagcagcagtgctgGCGATTCGCTTTGGAGCAGCAGCGAGGCGCAGCAATttcagcagcatcatcagcaacagctgcagcaacaactgcagcagcaacagcaggcgcaacagcagcaacaacaacagcagcaggcgcagcaacaacaacaacagcagcagcaggcgcaacaacaacaacagcagcagcagcaacaacaacagcagcaacagcatcatcatcaccatcatcatcaccaagcacaacagcaacaacaacagcagcagcaaggggGCAGCCAAGCACAGGGTTCGCAGACGCATCACCATCAGCTGAGGCGAACGCCATCGCCACTGAGTGCTGGCACCTCGCCGGCCACGCGGCGCAAGCGCTTGCGTAAATCCTCGAATAACGGTTCTGGTGATCGCAACAACTCAGAGGAGCAGCATAGCAGCTCACTGGATGCAACTGGCGCcgctggcagcgctgctggTCTGAGTCTGGCACAGATGAGTCAAATGTCGTTTGGCGGTGGGGCGGGTAATAATTCGACTGCAGCACTGGGCAGCCTCGCAGGGCACTCGATGCATGCCTCCAAGCTGCTGAAGGAGTCGGCGAACACTGAGCTAGAGCAACAGCCGCAGGACTCGGATCTGGACGATGCGCAtggacacatacatatgcaaattAAGCCGGAGGTGGACATCGGCAGTGTGAATCAAACGATGCCCCTGGACATTTCTGGCACTACAACACCATCGGAGCACGACGCGCCCAATTCACAATCGTCGCACTCTGGTCTGCAGTGGACAGTTGTTGATTCAAACTATTCGCGCTTTTCGATGCCCGCCTGCCAGTCCAATTtgattggcaatggcaatggcaacggcaatcAAAACAGCGCCGCGAATAGCAATGCCGGCGTCGGTACTGCCGGCACCACCGCCGACcagcgccaacagcagcagcagcacgaagctcagcagcaggcgacgcagcagcagcaacaacagcatctgcagcagctgcactatcagcagcagcagcaacaacaacagcagcaacagggcGCCACAGCGGGTCAGGCGTACTCGTCGCAAATCATAACCGTAAATAATCTGGTCAGTGGGTATGCAACGGCCGCCCAAAATCTATCACCCACATCGCCCAATGAGTCCAATATGGTGCAGTCCGTCTACAGTCAGGGTCCGACGCCCACACAGTCGCCTGTCCACTCCGGCGtgggcggtggcggcggcagcagtgCGGGTGGAAGTGCGGGCAGTGCTGggggcggcggcggtggcaatagcagcagcggcggtggcggcagcagcagtcaagtGACCAAACGCAAGCGATCCGTAAATCCACAGGGCGATGAGAATTTCATCAGGGCATTAGAAGCGGTGCGCACCGGCGGCATCGGATTCTGCAAGGCAGCTCGCCTCTACGGCGTGAACAATCGCACGCTTTGGCTGGAGTACAAGAAACGCGGCTATCCGGTGTCTAGACCGAGCATTAAGGCGCGCGTCGTCAAACAAGAACCGAATCTATCGCCCTCGCCCACACCATCCACAAATCCCGGCGACGATACGACCAACGAAACATATGATCATCTAGCCGCTGCAGCCGTTGCCGCAGCACAAACGGCTGCGCTCAACATGCAGATACCGCCGCAGACGGAGACGCCGACGCCATCGCTGATGTGCACGCCGCATCATGCGGGTGCAGGAGCGGCAACCTCTGCCGGTGGGGCCAACACGCATCCGACCATCGGCGTGATGAGCCTTTTCGATGCCCGCTACATGGACTCACCGGCCAGCGTGCACACCATGTCCCGGCAGCGGTATATCGATGCGACGGGCGCcggtgcggctgctgcagcgtcGGGAGCGGGCACAATCAATGTTAATCCGGCCGCTGCAATGAATCTACAGAGTATTAACTTCAACTCAATATAG
Protein Sequence
MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSSEATELLGQAGANVAGTGAGAAASSLSAASGSSSAGDSLWSSSEAQQFQQHHQQQLQQQLQQQQQAQQQQQQQQQAQQQQQQQQQAQQQQQQQQQQQQQQQHHHHHHHHQAQQQQQQQQQGGSQAQGSQTHHHQLRRTPSPLSAGTSPATRRKRLRKSSNNGSGDRNNSEEQHSSSLDATGAAGSAAGLSLAQMSQMSFGGGAGNNSTAALGSLAGHSMHASKLLKESANTELEQQPQDSDLDDAHGHIHMQIKPEVDIGSVNQTMPLDISGTTTPSEHDAPNSQSSHSGLQWTVVDSNYSRFSMPACQSNLIGNGNGNGNQNSAANSNAGVGTAGTTADQRQQQQQHEAQQQATQQQQQQHLQQLHYQQQQQQQQQQQGATAGQAYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGGGGSSAGGSAGSAGGGGGGNSSSGGGGSSSQVTKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTNETYDHLAAAAVAAAQTAALNMQIPPQTETPTPSLMCTPHHAGAGAATSAGGANTHPTIGVMSLFDARYMDSPASVHTMSRQRYIDATGAGAAAAASGAGTINVNPAAAMNLQSINFNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00490703;
90% Identity
iTF_00606986;
80% Identity
iTF_00609966;