Dana002103.1
Basic Information
- Insect
- Drosophila ananassae
- Gene Symbol
- -
- Assembly
- GCA_017639315.1
- Location
- CM029944.1:18112213-18113850[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.6e-16 1.8e-12 46.7 0.0 2 45 355 398 354 398 0.95 2 3 0.048 1e+02 2.7 0.0 28 37 428 437 427 442 0.90 3 3 6.5e-20 1.4e-16 59.8 0.0 2 41 464 503 463 505 0.96
Sequence Information
- Coding Sequence
- ATGAATCATCTAAAGTGGATGGGCCACTCGTCCACGATAATGGACATCCAGCGCTCGCTGCGGAACGACTCCCAGACCTGTGAAGTGGTGCTGGCCTCCAGGGATGGTGTTCGGGTGCGCGCCCATCTCTTCGTGCTGAGTACTTGCAGCGATCTGATGCGGAATATTTTAGTGGATGTGCCTCCGGGGCAGGAAGCTACCATCATGCTTCCCGATATACGGGGCGAACTTCTCGAGAGCATGCTCTCCTTCATATACATGGGAGAGACCAGCCTGCCCTCCGCGTCGCTCTCGGAGTTTCTGGAGGCCATCAATCTGCTGGGGATCAAGTCTGCCATTAGTTTCGAGTGCAATCCCTCGATTTCAAATCCCTCCGCGGACGTCAGCTCGTCTAATACGATGGCTGTGGAGACTAAGTCCATAACTGGTCTGCAGATAGCCCAGGCAGACCTTATAGAGGACGAGGAGGAGGTCCCACCACCCAGTTCCGTTGCAGCCACTGTCATAGCTGACCCGCCCACTCACTCTGCGCGTTCGTTGGAATACTTGGACGTATACGAGACCCCCAAGATCACCTACTCCATCGAGCACATGGATGGAAATACAAGTGGCAGTCAATATATTCTTACGGAAAACACGGGAACCTTTACAATTACACAGAGCGCTTCTACCCTGGCCAAGCTAACGGACGCAACGGAAACATCGGCCAGTGTCGCCGATGGGGAGATGGCGGATGAAGATGTTGACGCAGAAGCGGACGCGGATCCGGATGCGGACGTAGACCTCGCTGAAGACTCCGAGGAGCCCGACACTCAAATTCTGGAAGAGGAGTATGTGGCAGCCAACCCGACATTCGAAATAGGCAACGAAGGCGACATGGACGACGATGATATGCCCGAGGATATGGACGAGGAAATTCTGGATGTGAAGCCGCGAAAGTTTGGCGGGGGAAAGTCACGCGGCCGCCGACCCATGGGTGCCAGGACATCAAAGCGATCTTTTGGTAAACACCACCAGCAGCAGGAGTTTGTGAATCTGAAGCGGGATATCAAGGATGATATTAACGATGCCCTGGATATGGCAGCAGATGCAGTGATCCTCGAGGGACTGAGCTTGCAGAAGGCAGCCGATCGATTCGACATTTCGAAAACGGTGCTGTGGCGTCGGGTGCGCACCAATCCAGCCTATATGCGAAACAATCGGGAGAGGCCATCCCTATCCGAAGCATATGAGCGCCTTAAGAACGGAGACTCTCTGAAGAGCATCAGCCAGGACCTGCGCATCCCCATGTCCACGCTGCATCGGCACAAGGTACGCCTTTCGGCTGAAGGCCGTCTGCCTGATTTCGTGGCCTGTCGTCGGAGGGACACCACGCCCAAGGATGAGCTACGCGACAAATTGGCCAAGGCAGTGCACGCCTGCCTGAACGAGGGCATGTCCCAGAACCATGCAGCGAATCTCTTCGAAATCCCAAAGAGCACTCTTTGGCGGCACCTTCAGCGTCACGTCCCGGACGATGATCGGAAGGTAAAGAAGGAGCAGCAGGACGAGTACGAGGACGATCTGTTAAACTAA
- Protein Sequence
- MNHLKWMGHSSTIMDIQRSLRNDSQTCEVVLASRDGVRVRAHLFVLSTCSDLMRNILVDVPPGQEATIMLPDIRGELLESMLSFIYMGETSLPSASLSEFLEAINLLGIKSAISFECNPSISNPSADVSSSNTMAVETKSITGLQIAQADLIEDEEEVPPPSSVAATVIADPPTHSARSLEYLDVYETPKITYSIEHMDGNTSGSQYILTENTGTFTITQSASTLAKLTDATETSASVADGEMADEDVDAEADADPDADVDLAEDSEEPDTQILEEEYVAANPTFEIGNEGDMDDDDMPEDMDEEILDVKPRKFGGGKSRGRRPMGARTSKRSFGKHHQQQEFVNLKRDIKDDINDALDMAADAVILEGLSLQKAADRFDISKTVLWRRVRTNPAYMRNNRERPSLSEAYERLKNGDSLKSISQDLRIPMSTLHRHKVRLSAEGRLPDFVACRRRDTTPKDELRDKLAKAVHACLNEGMSQNHAANLFEIPKSTLWRHLQRHVPDDDRKVKKEQQDEYEDDLLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00615487;
- 90% Identity
- iTF_00477261; iTF_00477432; iTF_00476028; iTF_00481639; iTF_00550347; iTF_00481465; iTF_00550176; iTF_00566192; iTF_00487921; iTF_00566002; iTF_00488119; iTF_00538879; iTF_00539063; iTF_00579903; iTF_00580076;
- 80% Identity
- iTF_00477261; iTF_00477432; iTF_00476028;