Daff014093.1
Basic Information
- Insect
- Drosophila affinis
- Gene Symbol
- ftz-f1
- Assembly
- GCA_037356375.1
- Location
- CM074802.1:57706939-57718484[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.048 5.4e+02 0.0 7.9 76 153 60 175 4 186 0.50 2 3 8.1e-20 9e-16 58.6 0.8 1 79 341 418 341 439 0.76 3 3 1.9e-70 2.2e-66 225.3 1.7 157 409 552 797 536 798 0.92
Sequence Information
- Coding Sequence
- ATGTTATTAGAAATGGATCAGCAACAGGCGACCGTACAGTTTATATCGTCGCTGAATATATCGCCGTTCAGCATGCagctcgagcagcagcagcagccctcGAGTCCGGCCCTGGCCGCCAACCAGCAGCCCCAGACGggctccaacaacaacaacaacagcagcagcggcggcggcaacaataacaacaacaacaacgataaCGACGGAAATGGTCTTTCAAAATTCGAGCATGAATACAACGCGTATACGCTCCAGCTAGCGGGCGGTGCAGGTGGGGCAGGAGGCGGCACTGTcagcggcagccagcagcagcagcagcaccacagcacgcaccaccagcagcagtccgACCCGCAGGGCCActaccagcagcaacagcagcagcagcagcaacagaataTTGCCAACAACGCCAACAACCAATTCAACTCCTCGTCCTACTCGTACATATACAACTTCGATACAACACAGTATATATTCCCGACAGGCTACCAGGACACCACCTCCTCCCACTCGCAGCAGAGCGGCGgtgggggcggcggcggcggcggagctGGCGGCAACCTCCTCAACGGCAGCTCGGGCAGCAGCTCGGGCTacatgctgctgccacaggcGGCCAGCTCCAGCGGCAACGCCAATGCCGCTCACATGTCCTCGGCCAGCGGAGCCGTTGGCAATGCCAGCGGCCCCaacggtggcggcggcggcggcggcggttcCGGTCCTGGCAATGCCATGGGCGGCACGAGCGCCACCCCGGGACACGGCGGCGAGGTGATCGACTTCAAGCATCTGTTCGAGGAACTGTGCCCCGTGTGCGGCGACAAGGTCAGTGGCTACCACTACGGCCTGCTCACCTGCGAGTCCTGCAAGGGCTTCTTCAAGCGGACGGTCCAGAACAAGAAGGTCTACACCTGCGTGGCGGAGCGGTCGTGCCACATCGACAAGACGCAGCGCAAGCGGTGTCCCTACTGCCGCTTCCAGAAGTGCCTGGAGGTGGGCATGAAGCTGGAGGCTGTTCGAGCGGATCGGATGCGGGGTGGCAGGAACAAGTTCGGACCCATGTACAAGCGGGATCGGGCGCGAAAGCTGCAGGTGATGCGTCAGCGGCAGATCGCCCTCCAGGCGCTGCGCAACTCGATGGGGCCGGACATCAAGCCGACGCCGATCTCGCCGGGCTACCAGCAAGCATATCCAAATATGAACATTAAGCAGGAAATCCAAATACCTCAGGTATCCTCACTCACCCAGTCGCCGGACTCGTCGCCcagtcccattgccattgccttgGGCCAGGTGAATGCCAGCGCGGGAGGAGTGATAGCCACGCCCATTAATGCCGGAAACGGAggcagtggcggcggcggcggcggtggcggcctGAACGGCCCCAGCTCCGTGGGCAATGGCAatagcagcaacggcagcagcagcaacaacaacaccggCAGCAGCACAGGCAACGGGGCAGGTGGCGCcggcggaggcggcggtggcaacaatgcgggcggcggcggcggcaataACAGCTCCACCGATGGCCTGCATCGCAACGGCGGCGGCAATGGCAACTGCCACGAAGCTGGAATAGGATCTCTGCAGAACTCGGCCGACTCGAAACTGTGcttcGATTCCGGCACTCATCCATCGAGCACGGCCGATGCGCTTATCGAGCCACTAAGAGTCTCACCGATGATACGAGAGTTTGTGCAATCGATCGACGATCGGGAATGGCAGACGCAGCTGTTCGCGCTGCTGCAGAAGCAGACCTACAACCAGGTGGAGGTGGATCTCTTTGAGCTGATGTGCAAGGTGCTCGATCAGAATCTGTTCTCGCAGGTGGACTGGGCAAGGAACACGGTCTTCTTCAAGGATCTGAAGGTTGATGATCAAATGAAGCTGCTGCAACACTCCTGGTCGGACATGCTGGTCCTCGACCATCTGCACCATCGCATCCACAACGGGCTGCCCGATGAGACGCAGCTGAACAACGGACAGGTCTTCAATCTGCTCAGCCTGGGCCTGTTGGGCGTGCCGCAGTTGTCCGACTATTTCAACGAGCTGCAGAACAAGCTGCAGGATCTGAAATTCGACATGGGCGACTATGTCTGCATGAAATTCCTAATACTTTTGAATCCAACTGTACGCGGTATTGTCAACAGGAAGACCGTGTCGGAGGGACATGATAATGTGCAGGCAGCCCTGCTGGACTACACCCTCACCTGTTATCCTTCAGTCCACGAAAAATTCAGTAGGCTAGTGAACATCTTACCGGAAATCCATGCCATGGCCGCACGCGGCGAGGACCACCTCTACACCAAGCACGTTGCCGGCAGTGCACCCACCCAGACGCTGCTCATGGAGATGCTGCACGCCAAACGGAAGGGATAG
- Protein Sequence
- MLLEMDQQQATVQFISSLNISPFSMQLEQQQQPSSPALAANQQPQTGSNNNNNSSSGGGNNNNNNNDNDGNGLSKFEHEYNAYTLQLAGGAGGAGGGTVSGSQQQQQHHSTHHQQQSDPQGHYQQQQQQQQQQNIANNANNQFNSSSYSYIYNFDTTQYIFPTGYQDTTSSHSQQSGGGGGGGGGAGGNLLNGSSGSSSGYMLLPQAASSSGNANAAHMSSASGAVGNASGPNGGGGGGGGSGPGNAMGGTSATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQIALQALRNSMGPDIKPTPISPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNASAGGVIATPINAGNGGSGGGGGGGGLNGPSSVGNGNSSNGSSSNNNTGSSTGNGAGGAGGGGGGNNAGGGGGNNSSTDGLHRNGGGNGNCHEAGIGSLQNSADSKLCFDSGTHPSSTADALIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLLSLGLLGVPQLSDYFNELQNKLQDLKFDMGDYVCMKFLILLNPTVRGIVNRKTVSEGHDNVQAALLDYTLTCYPSVHEKFSRLVNILPEIHAMAARGEDHLYTKHVAGSAPTQTLLMEMLHAKRKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00581562;
- 90% Identity
- iTF_00471671; iTF_00517736; iTF_00517762; iTF_00603371; iTF_00473808; iTF_00473834; iTF_00611378; iTF_00611404; iTF_00487323; iTF_00487351; iTF_00580763; iTF_00580790; iTF_00536096; iTF_00536071;
- 80% Identity
- iTF_00471671;