Basic Information

Insect: Dione juno
Gene Symbol: -
Assembly: GCA_037127375.1
Location: JAXRJS010000101.1:347549-349824[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.94 85 4.5 0.1 2 23 14 36 13 36 0.94

2 18 0.00034 0.031 15.4 0.7 2 23 59 80 58 80 0.97

3 18 0.00028 0.025 15.7 0.0 1 23 84 106 84 106 0.98

4 18 0.0023 0.2 12.8 1.3 1 23 111 134 111 134 0.96

5 18 1.5 1.4e+02 3.9 5.2 2 23 142 164 142 164 0.95

6 18 2.5e-05 0.0022 19.0 1.9 2 23 172 194 171 194 0.96

7 18 0.035 3.2 9.0 4.1 1 23 200 222 200 222 0.97

8 18 1.9 1.7e+02 3.6 1.1 1 12 228 239 228 240 0.91

9 18 0.0026 0.23 12.6 0.7 1 23 318 341 318 341 0.92

10 18 0.02 1.8 9.8 0.2 2 23 368 390 367 390 0.96

11 18 0.11 10 7.4 3.2 2 23 413 434 412 434 0.97

12 18 0.041 3.7 8.8 2.2 1 21 438 458 438 460 0.94

13 18 0.00097 0.088 13.9 2.2 1 23 465 488 465 488 0.98

14 18 0.11 9.6 7.5 0.2 2 23 496 518 496 518 0.95

15 18 0.00013 0.011 16.7 7.0 2 23 526 547 526 548 0.95

16 18 0.0016 0.14 13.3 0.4 1 23 554 576 554 576 0.98

17 18 2.7e-05 0.0024 18.9 4.3 1 23 582 604 582 604 0.99

18 18 2e-05 0.0018 19.3 4.8 1 23 610 633 610 633 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.94	85	4.5	0.1	2	23	14	36	13	36	0.94
2	18	0.00034	0.031	15.4	0.7	2	23	59	80	58	80	0.97
3	18	0.00028	0.025	15.7	0.0	1	23	84	106	84	106	0.98
4	18	0.0023	0.2	12.8	1.3	1	23	111	134	111	134	0.96
5	18	1.5	1.4e+02	3.9	5.2	2	23	142	164	142	164	0.95
6	18	2.5e-05	0.0022	19.0	1.9	2	23	172	194	171	194	0.96
7	18	0.035	3.2	9.0	4.1	1	23	200	222	200	222	0.97
8	18	1.9	1.7e+02	3.6	1.1	1	12	228	239	228	240	0.91
9	18	0.0026	0.23	12.6	0.7	1	23	318	341	318	341	0.92
10	18	0.02	1.8	9.8	0.2	2	23	368	390	367	390	0.96
11	18	0.11	10	7.4	3.2	2	23	413	434	412	434	0.97
12	18	0.041	3.7	8.8	2.2	1	21	438	458	438	460	0.94
13	18	0.00097	0.088	13.9	2.2	1	23	465	488	465	488	0.98
14	18	0.11	9.6	7.5	0.2	2	23	496	518	496	518	0.95
15	18	0.00013	0.011	16.7	7.0	2	23	526	547	526	548	0.95
16	18	0.0016	0.14	13.3	0.4	1	23	554	576	554	576	0.98
17	18	2.7e-05	0.0024	18.9	4.3	1	23	582	604	582	604	0.99
18	18	2e-05	0.0018	19.3	4.8	1	23	610	633	610	633	0.98

Sequence Information

Coding Sequence: ATGCGCATTTATACCGTAAAATTGGACGTAACGGGTTTGCAATGTTCTATATGTCAATTCGATATAGAAACAATTGAGACACTCATGGACCATCTCATTAGAGAGCACCAACGTATCATCTACGTGGACATCAAAAATCATATGGTACCGTTCAAATTTGACAATGATGAATTAAAATGTGCCATATGCTtagaaaaatttgtaaaattcagAAATTTAACCGAACACATGAACACCCATTACAGAAATTACGTGTGTGACGTATGTGGCGCTGGCTTTGTGAATCGCGACATCCTGCGCAGTCATTTGCGAATACATAAAACAGGCGATTTTAGTTGTGATTTCTGTACTAAAACTTTTAACACTTTAGTTAAAAAACAAtcccatataaatatagtgcACAAACGTTTGTACATGACAAGAAAATGCGGATATTGTAACGAACACTTCGACGATTATCACAAGAAAAACGACCATTTGACAAAGTTTCATGGTGTTAACTTGGTTATCTTAAAATGTGATTTATGCGACAAAACTTTTATCAATCAAAATAGATTTAGGCGACACGTTAGGAAAGATCACCTCATGGAGAGGAATCACGAGTGTGAACTTTGTGATATGAAATTCTTTTGTGGTGAAAATTTAAGGAAACATATGTTAACGCACACCGGAGCAAAGGATTTCCATTGCAGCTCGTGTACCAAGTCTTTTGCACGTGATCCAActgaaactatatattttgaagaagtaaaaaatattagcaaagtaacgagaaaaagaaaaataacattgGACACTGAATGTACAGTGAAGAAGAAATCTAAACTTATGATAGAGTCTAAAAAGATCAAATTAAAACCTATTAAGGAATTATCCAAACATCATCACAATATAAAAGAGATACTTCAATGTTCCAACACAACTCCAATTCACGGTAAAAGTGATTTGGGTTACCTGTGCTGCTATTGCACAGAACAGTTCCCAGATCCAGCTGATTTGAAACAGCACACAATACAAATGCACAGAAACGGAATTAAACCTACTTTCTTTCAAAAGAGAGATCTACAAAAGTTCTACGTCAAAGTTGACATCACCGGGTTGCGGTGTAACATGTGTACCAAAGATATTGAAGATTTGGAAAAGTTGATTGATCACCTCAAAACTGACCATGACAGGAAAATATATACGGATATTAAAAACCACATGGTACCATTTAAGTTTGGCAGGGAGGAgctgaaatgttttatatgctcCAATGTCTATACTAAATTTAAGATGCTTCTAGAGCATATGCATAAGCATTGCAGAAATTTCATATGTGAGCTGTGCGGTGCGGGTTTTTTTAATCGTAGATCTTATATAAATCACCAAAAGTGTCACGTGGTGGGGGAATTCAAATGTGATCGATGCGAGAAAATCTTCAACAATGCCCAAAAGAGAAATCAGCATTATAGGACCGTCCACGTACACGAGTACAAATTGAATAGATGCGGCTACTGCAATGAGAAATTTGCCGGTTACCGAACTAAAGCGGAACATTTAAGGATAGTTCACGGAGTTGGATCTGAAATAGCTAAATGTCAAGCGTGTGAAAAGAGCTTCTGTAATAAGGACTCTTTGAGGAAACACATTAAGAGACACCATTTAATGGAAAATCAATACAGTTGTACGCTATGTGAAATGAAATTCTTTGCGAATAGAAATTTAGCAGAACATATGGTGACTCATACGAAAATACGTTCCTTTCAATGCAACGTATGCTTCAAGAAATATGGGCGAAAGCACACGCTAAGGGAGCACATGCGAATACACAACAATGATAAACGATATAAATGCGAGCACTGTGGGATGGCGTTTGTGCAAAAATGTAGTTGGCGACGGCACATGCAGTCCAAACATGATGAGCCAGTTTAA
Protein Sequence: MRIYTVKLDVTGLQCSICQFDIETIETLMDHLIREHQRIIYVDIKNHMVPFKFDNDELKCAICLEKFVKFRNLTEHMNTHYRNYVCDVCGAGFVNRDILRSHLRIHKTGDFSCDFCTKTFNTLVKKQSHINIVHKRLYMTRKCGYCNEHFDDYHKKNDHLTKFHGVNLVILKCDLCDKTFINQNRFRRHVRKDHLMERNHECELCDMKFFCGENLRKHMLTHTGAKDFHCSSCTKSFARDPTETIYFEEVKNISKVTRKRKITLDTECTVKKKSKLMIESKKIKLKPIKELSKHHHNIKEILQCSNTTPIHGKSDLGYLCCYCTEQFPDPADLKQHTIQMHRNGIKPTFFQKRDLQKFYVKVDITGLRCNMCTKDIEDLEKLIDHLKTDHDRKIYTDIKNHMVPFKFGREELKCFICSNVYTKFKMLLEHMHKHCRNFICELCGAGFFNRRSYINHQKCHVVGEFKCDRCEKIFNNAQKRNQHYRTVHVHEYKLNRCGYCNEKFAGYRTKAEHLRIVHGVGSEIAKCQACEKSFCNKDSLRKHIKRHHLMENQYSCTLCEMKFFANRNLAEHMVTHTKIRSFQCNVCFKKYGRKHTLREHMRIHNNDKRYKCEHCGMAFVQKCSWRRHMQSKHDEPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00621407; iTF_00782821; iTF_01182060; iTF_00778232; iTF_00782043; iTF_00782034; iTF_00248317; iTF_00781214; iTF_00776863;
90% Identity: iTF_00782821;
80% Identity: -