Dpha020406.1
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- -
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000091.1:52655-55164[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.09 6.9 7.8 2.2 1 23 31 54 31 54 0.97 2 18 7.5 5.7e+02 1.8 0.0 2 23 79 101 78 101 0.90 3 18 6.7e-05 0.0051 17.7 0.7 2 23 124 145 123 145 0.98 4 18 3.7e-06 0.00028 21.6 0.1 1 23 149 171 149 171 0.98 5 18 0.0042 0.32 12.0 1.1 1 23 176 199 176 199 0.97 6 18 1.9 1.4e+02 3.7 5.7 2 23 207 229 207 229 0.95 7 18 2.8e-05 0.0021 18.9 3.5 2 23 237 259 236 259 0.97 8 18 0.00085 0.065 14.2 2.8 1 23 265 287 265 287 0.97 9 18 0.0027 0.21 12.6 0.7 1 23 376 399 376 399 0.92 10 18 0.014 1.1 10.3 0.1 2 23 426 448 425 448 0.96 11 18 0.13 10 7.3 3.2 2 23 471 492 470 492 0.97 12 18 0.047 3.6 8.7 2.2 1 21 496 516 496 518 0.94 13 18 0.0023 0.17 12.8 1.7 1 23 523 546 523 546 0.98 14 18 0.12 9.4 7.4 0.2 2 23 554 576 554 576 0.95 15 18 0.00014 0.011 16.6 7.0 2 23 584 605 584 606 0.95 16 18 0.0014 0.11 13.5 0.6 1 23 612 634 612 634 0.98 17 18 3.1e-05 0.0023 18.7 4.3 1 23 640 662 640 662 0.99 18 18 9.9e-05 0.0076 17.1 3.6 1 23 668 691 668 691 0.96
Sequence Information
- Coding Sequence
- ATGCAAGAAGTAGAAAAGCACCGAATCAATTTTGTAGAAGTCGTGACGTACTCCAATGCAACGCCTATTCGCTGTAAAGGTGACATTGGCTATAGTTGCTGTTTTTGTTCAGAGCAGTACCAAGAAGCTGCTGATCTGAAACGGCATACAATAACGAAGCATGATAATCACGACATTGTAAAATTTGTCAAAGAAATGCGCATTTATACTATCAAATTAGATGTGACGGGATTGCAATGTGCTATTTGTCAGTCAGATATACCGTCGCTCGAGGAACTGATGGACCATCTAGTCAGAGAGCACCGCCACCTCATTTATTTAGACATCAAGAATCACATGGTCccatttaaatttgaaagtgaagaaatgaaatgtGCAATATGCCCAATGAAATTTGTGAAATTCAGAAATTTAACTGAACACATGAACACTCATTACAGAAATTACGTGTGTGACGTGTGCGGGGCGGGCTTTGTGAATCGCGACACTCTGCGCAGTCATTTAAGGATACACAAGACAGGCGATTTCACTTGTGATTTTTGTGTAAAATCTTTCAACACTTTAGTTAAAAAGCAGTCCCATATAAAAATAGTTCACAAACGATTGCACATGATAAGAAAGTGCGGATATTGTAACGAGCATTTCGATAATTATCACAAGAAGAATGAACATTTGACCAAGTTTCATGGTGTTAATCTAGTTATCATAAAATGTGAACATTGcgacaaaacatttattaatcaAAACAGGTTTAACCGGCATGTCAGAAAAGACCATCTCATGGAGAGAAACCATGAGTGTGAAATATGTTATATGAAATTCTTTAGTGGTGAAAATTTAAGGAAGCACATGTTCACGCATACAGGACAGAAGGATTTCCACTGCAGTATATgtCCAACTGAAACTGTATATATTGAAGAAGTAAAGAATGGTAAAGAAATAAGTAGAAAGAGAAAGATAAAAGCGGGCAATGAATGTATAGtgaaaaaaaaagctaaaataactataaaaacgaataaaatcaaattaaagcCTATTAAAGAATTGTCTAAACATCATCACAATATAAAAGAGATACTTCAATGTTCCAACGTGACTCCTATACACGGTAAAAGTGATCTGGGCTACTTGTGCTGCTATTGTTCAGAACAATTCCCAGATCCGGCTGATTTAAAAAACCACACTATACAAATGCACAAAAACGGTCACAAACCAACTTTTTTTCAAAAGAGAGATCTACAAAAATTCTACGTAAAAGTCGACATCACCGGACTGCGATGTAACATGTGCACGAGAGATGTTGAAGATTTAGAAAAGCTGATTGTCCATTTGAAAACTGAACataataggaaaatatttacaGATATAAAGAACCTTATGGTACCGTTTAAATTTGGCAATGACGAGctgaaatgttttatatgttcaaacGTGTACACCAAATTCAAGATGCTTTTAGAGCACATGCATAAACattgtagaaattttatatgtgaGCTGTGCGGTGCGGGGTTTTTTAATCGTAGATCCTACATAAATCATCAAAAATGTCACGTTTTGGGTGAATTCAAATGTGATCAATGCGAGAAAATCTTTGACAACGCTCAAAAGAGAAATCAACACTTCAGAACTGTCCACGTACATGAGTATAGGTTGAATAGGTGCGGATACTGCAATGAAAAATTTGCTGGATACCGAACCAAGGCGGAACATTTGAGAATTGTTCACGGCGTTGGATCTGAAACAGCTAAATGTCAAGCGTGTGAGAAAAGTTTTTGTAACAAGGACTCTTTAAGGAAACATATCAAAAGACATCACTTGATGGAAAGTCAATACAGCTGTGCGTTATGCGACATGAAATTCTTTGCGAAGAGAAATTTATCGGAACACATGGTCACGCATACAAAGATTCGTTCGTTCCAATGCAACGTGTGTTTCAAGAAGTATGGCCGGAAACATACGTTACGCGAACATATGCGCATACATAACAATGATAAACGGTACAAGTGCGAACACTGCGGGATGGCCTTTGTGCAAAAGTGCAGTTGGCGGCGGCACTTGGCGTCCAAACATGACGAGCAAGCGTAA
- Protein Sequence
- MQEVEKHRINFVEVVTYSNATPIRCKGDIGYSCCFCSEQYQEAADLKRHTITKHDNHDIVKFVKEMRIYTIKLDVTGLQCAICQSDIPSLEELMDHLVREHRHLIYLDIKNHMVPFKFESEEMKCAICPMKFVKFRNLTEHMNTHYRNYVCDVCGAGFVNRDTLRSHLRIHKTGDFTCDFCVKSFNTLVKKQSHIKIVHKRLHMIRKCGYCNEHFDNYHKKNEHLTKFHGVNLVIIKCEHCDKTFINQNRFNRHVRKDHLMERNHECEICYMKFFSGENLRKHMFTHTGQKDFHCSICPTETVYIEEVKNGKEISRKRKIKAGNECIVKKKAKITIKTNKIKLKPIKELSKHHHNIKEILQCSNVTPIHGKSDLGYLCCYCSEQFPDPADLKNHTIQMHKNGHKPTFFQKRDLQKFYVKVDITGLRCNMCTRDVEDLEKLIVHLKTEHNRKIFTDIKNLMVPFKFGNDELKCFICSNVYTKFKMLLEHMHKHCRNFICELCGAGFFNRRSYINHQKCHVLGEFKCDQCEKIFDNAQKRNQHFRTVHVHEYRLNRCGYCNEKFAGYRTKAEHLRIVHGVGSETAKCQACEKSFCNKDSLRKHIKRHHLMESQYSCALCDMKFFAKRNLSEHMVTHTKIRSFQCNVCFKKYGRKHTLREHMRIHNNDKRYKCEHCGMAFVQKCSWRRHLASKHDEQA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00457411;
- 90% Identity
- -
- 80% Identity
- -