Dgla023978.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- -
- Assembly
- GCA_963693315.1
- Location
- OY856186.1:208353036-208353386[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-11 2.9e-08 35.7 0.0 2 37 9 45 8 50 0.91
Sequence Information
- Coding Sequence
- ATGCCAAAGAGAAAGTTGTGGAATCCGGAAGCAATGAAAAAAGCCATTGAAGCTGTCCGAAATAAAGAAACGGGTTATAAAAAAGCAGTTAAGTTATTTAATGTTCCAAGAGCTACTTTGAAAGATTATGTAAAAAATTCTGATAAATCTATAAAAGATATAGATTCTGGAAAAATGGGACGAAAACCAGTTTTGCTAATTGAATTAGCAGAGGAGTTGGTAAACTATTGCTTGCAAATGGAAAAGAATTACTATGGTTTCACCGCTTCTGATTTAAAACGAATGGCCATCAGAAATATTATTCGACAGCCAAATtcacaaactaaaaaaaaagcAGGCAAAAATGGATGA
- Protein Sequence
- MPKRKLWNPEAMKKAIEAVRNKETGYKKAVKLFNVPRATLKDYVKNSDKSIKDIDSGKMGRKPVLLIELAEELVNYCLQMEKNYYGFTASDLKRMAIRNIIRQPNSQTKKKAGKNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455910; iTF_01438827; iTF_01438826; iTF_00455850; iTF_01341091; iTF_00455852; iTF_00455853; iTF_00455854; iTF_00455856; iTF_00455858;
- 90% Identity
- -
- 80% Identity
- -