Dgla021612.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- -
- Assembly
- GCA_963693315.1
- Location
- OY856186.1:171510909-171511271[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-11 8e-09 37.5 0.0 1 37 8 45 8 50 0.92 2 2 1.7 1.3e+03 1.6 0.0 9 18 51 60 48 61 0.88
Sequence Information
- Coding Sequence
- aTGCCAAAGAGAAAGTTGTGGGATCCGGAAGCAATGAAAAAAACCGTTGAAGCTGTCCGAAATAAAGAAATGGGTTTTAAAAAAGCAGCTAAGCTATTTAATGTTCCAAGAGCTACTTTGAAAGATAACCTGAAAAATTCTGATAAATCTATAGAAGATATAGTTTCTGGAAAAATGGGACGAAAACCAGTTTTGCCAATTGAATTAGAAGAGGAGTTGGTAAACTATTACTTGCAAATGGAAAAGAATTACCATGGTGTCACCGCTTCTGATTTAAAACGAATGGCTTTTCAATTGGCCATCAGAAACAATATTCGACACTCATATTCACAAACTAAAAAAAAGCAGGCAAAAAATGGATGA
- Protein Sequence
- MPKRKLWDPEAMKKTVEAVRNKEMGFKKAAKLFNVPRATLKDNLKNSDKSIEDIVSGKMGRKPVLPIELEEELVNYYLQMEKNYHGVTASDLKRMAFQLAIRNNIRHSYSQTKKKQAKNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455859;
- 90% Identity
- iTF_00455850;
- 80% Identity
- -