Sbem009123.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- -
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000316.1:280698-281009[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-10 4.1e-08 33.2 0.0 5 37 1 34 1 39 0.90 2 2 1.6 2.1e+02 2.1 0.0 9 18 40 49 37 51 0.85
Sequence Information
- Coding Sequence
- atgaaaaaagctgttgaagctgtacgaacgaaagaaatgagttataaaaaggcagtaaagttatttaacgtcccaagagctactttgaaagattacgtgaaaaattctgacaaatctatagaaaatgtagtttctgggaaaatgggaagaagaccagttttgcctgtagaattagaagaggagctggtaaactattgtttgcaaatggagaagaattactatggtgttactgcttctgatttaaaacgaatggcttttcaattggctatgagaaataatattccactccacatccattttcacagaccataa
- Protein Sequence
- MKKAVEAVRTKEMSYKKAVKLFNVPRATLKDYVKNSDKSIENVVSGKMGRRPVLPVELEEELVNYCLQMEKNYYGVTASDLKRMAFQLAMRNNIPLHIHFHRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455859;
- 90% Identity
- -
- 80% Identity
- -