Dgla027037.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- -
- Assembly
- GCA_963693315.1
- Location
- OY856186.1:252118056-252118418[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-14 3.6e-11 45.0 0.0 1 38 8 46 8 52 0.90 2 2 7.3 5.7e+03 -0.4 0.0 10 18 52 60 48 61 0.87
Sequence Information
- Coding Sequence
- aTGCCAAAGAGAAAGCTGTGGGATCCGGAAGCAATGAAAAAAGCCGTTGAAGCTGTCCGAAATAAAGAAATGGGTTATAAAAAAGCAGCTAAGCTATTTAATGTTCCAAGAGCTACTTTGAAAGATTACGTGAAAAATTCTGATAAATCTATGGAAGATATAGTTTCTGGAAAAATGGGACGAAAACCAGTTTTGCCAATTGAATTAGAAGAGGAGTTGGTAAACTATTGCTTGCAAATGGAAAAGAATTACTATGGTGTCACCGCTTCTGATTTAAAACGAATGGCTTTTCAATTGGCCATCAGAAACAATATTCGACACCCATATtcacaaactaaaaaaaaacaggcaaaaaatggaTGA
- Protein Sequence
- MPKRKLWDPEAMKKAVEAVRNKEMGYKKAAKLFNVPRATLKDYVKNSDKSMEDIVSGKMGRKPVLPIELEEELVNYCLQMEKNYYGVTASDLKRMAFQLAIRNNIRHPYSQTKKKQAKNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455859;
- 90% Identity
- iTF_00455852; iTF_00455853; iTF_00455854; iTF_00455856; iTF_00455858;
- 80% Identity
- -