Dgla084467.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- -
- Assembly
- GCA_963693315.1
- Location
- OY856188.1:174170068-174170430[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-07 8.5e-05 24.6 0.0 4 37 11 45 8 50 0.85 2 2 2.7 2.1e+03 1.0 0.0 9 18 51 60 51 61 0.91
Sequence Information
- Coding Sequence
- atgCCGAATAGAAAGTTGAGGAATCCGGAAACAGTGAAAAAAACCATTAAAGCTGTCCGAAATAAAGAAATGGGTTATAAAAAAGCAATTAAGTTATTTAATGTTCCAAGAGCTACTTTGAAAGATTACGTAAAAAATTCTGATAAATTTATAGAAGATATAGTTTCTGGAAAAATGGGACGAAAACCAGTTTTGCTAATTGAATTAGCAGAGGAGTTGGTAAACTATTGCTTGCAAATGGAAAAGAATTACTATGGTGTCACCGCTTCTGATTTAAAACGAATGGCTTTCCAATTGGCCATCAGAAATATTATTCGACAGCCATATTCACAAACTAAAAAAAAGCATGCAAAAAATGGTTGA
- Protein Sequence
- MPNRKLRNPETVKKTIKAVRNKEMGYKKAIKLFNVPRATLKDYVKNSDKFIEDIVSGKMGRKPVLLIELAEELVNYCLQMEKNYYGVTASDLKRMAFQLAIRNIIRQPYSQTKKKHAKNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455859;
- 90% Identity
- -
- 80% Identity
- -