Dgla038958.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- -
- Assembly
- GCA_963693315.1
- Location
- OY856186.1:417387807-417388136[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-10 1.8e-07 33.2 0.0 5 37 1 34 1 39 0.90 2 2 1.5 1.2e+03 1.8 0.0 9 18 40 49 37 50 0.88
Sequence Information
- Coding Sequence
- ATGAAAAAAGCCGTTGAAGCTGTCCGAAATAAAGAAATGGGTAATAAAAAAGCAGCTAAGTTATTTACTGTTCCAAAAGCTACTTTGAAAGATTACGTAAAAAATTCTGATAAATCTATAGAAGATATAGTTTCTGGAAAAATGGGACGAAAGCCAGTTTTGCCAATTGAATTAGAAGAGGAGTTGGTAAACTATTGCTTgcaaatggaaaaaaattactATGGTGTCACCGCTTGTGATTTAAAACGAATGGCTTTCCAATTAgccatcaaaaataatattCGACAGCCATATTCACAAACTGAAAAAGAGCAGgtaaaaaatgtatga
- Protein Sequence
- MKKAVEAVRNKEMGNKKAAKLFTVPKATLKDYVKNSDKSIEDIVSGKMGRKPVLPIELEEELVNYCLQMEKNYYGVTACDLKRMAFQLAIKNNIRQPYSQTEKEQVKNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455859;
- 90% Identity
- iTF_00455850;
- 80% Identity
- -