Basic Information

Insect: Cylloceria caligata
Gene Symbol: RREB1
Assembly: GCA_963942595.1
Location: OZ012709.1:39939251-39948720[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0025 0.51 12.4 0.0 1 23 60 82 60 82 0.98

2 15 0.00013 0.025 16.4 0.3 1 23 96 118 96 118 0.98

3 15 2.7e-07 5.4e-05 24.9 1.3 1 23 124 147 124 147 0.98

4 15 0.059 12 8.1 0.1 1 23 244 268 244 268 0.94

5 15 1.4 2.7e+02 3.8 3.3 2 23 274 296 274 296 0.94

6 15 0.077 16 7.7 0.1 1 23 487 509 487 509 0.96

7 15 3.3e-05 0.0066 18.3 0.3 1 23 518 540 518 540 0.98

8 15 0.0021 0.42 12.6 2.9 1 23 546 569 546 569 0.97

9 15 0.00053 0.11 14.5 3.0 1 23 983 1006 983 1006 0.97

10 15 0.00076 0.15 14.0 0.1 3 23 1324 1344 1322 1344 0.97

11 15 1.1 2.1e+02 4.1 6.5 1 23 1350 1373 1350 1373 0.97

12 15 0.021 4.3 9.4 1.8 1 23 1413 1437 1413 1437 0.95

13 15 0.63 1.3e+02 4.8 3.1 1 23 1596 1619 1596 1619 0.96

14 15 0.013 2.6 10.1 0.4 2 23 1670 1691 1669 1691 0.94

15 15 1.5 3.1e+02 3.6 8.2 1 23 1697 1719 1697 1719 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0025	0.51	12.4	0.0	1	23	60	82	60	82	0.98
2	15	0.00013	0.025	16.4	0.3	1	23	96	118	96	118	0.98
3	15	2.7e-07	5.4e-05	24.9	1.3	1	23	124	147	124	147	0.98
4	15	0.059	12	8.1	0.1	1	23	244	268	244	268	0.94
5	15	1.4	2.7e+02	3.8	3.3	2	23	274	296	274	296	0.94
6	15	0.077	16	7.7	0.1	1	23	487	509	487	509	0.96
7	15	3.3e-05	0.0066	18.3	0.3	1	23	518	540	518	540	0.98
8	15	0.0021	0.42	12.6	2.9	1	23	546	569	546	569	0.97
9	15	0.00053	0.11	14.5	3.0	1	23	983	1006	983	1006	0.97
10	15	0.00076	0.15	14.0	0.1	3	23	1324	1344	1322	1344	0.97
11	15	1.1	2.1e+02	4.1	6.5	1	23	1350	1373	1350	1373	0.97
12	15	0.021	4.3	9.4	1.8	1	23	1413	1437	1413	1437	0.95
13	15	0.63	1.3e+02	4.8	3.1	1	23	1596	1619	1596	1619	0.96
14	15	0.013	2.6	10.1	0.4	2	23	1670	1691	1669	1691	0.94
15	15	1.5	3.1e+02	3.6	8.2	1	23	1697	1719	1697	1719	0.98

Sequence Information

Coding Sequence: ATGGAGAAGGCGAACGGCTCGAGGAGAAGTGGGAcgacgactacgacgacagtagcagcagcagtagcagcaagaGTGACAGCAAAAGCTGAGAACCGAGCAGAGCTTCGACACATCAACGAGAAACAGACAGATGCGGTATCATCGCCACTGGGAGTGGATCAACAGGACGGTACTTATCCCTGTCCAGCTTGTCCGATAGTACTGTCGAGCCCTCACGAGCTGTCGAATCATCTTCGCGGTCACAATTCACCGCGCAGCACCGATTACAGTGGCGAAGACGATTACACGTGTGGCGTGTGTCACAAGGTACTGAGCTCCGCGAGCTCGTTGGACCGTCACGTTCTCGTTCACTCCGGCGAACGTCCCTTCAAGTGCAAATACTGCGACATGGCGTTCACGACAAACGGCAACATGAATAGACACCTCAGAACCGCTCACGGCGGTCTCTCTCCCCGGGAGAACAGTTGCACTGATTCCGAGGCGAGCAGCGACTCGGAAAAGCCAACCAGCAAGAGACGTCACGTTGAGGAGGAATACAACAATAATGAAATCGCTAAAACGAGCTCTCCGGATTTTATCGAGCACCATGACTCGCCGACGTTCGTAGCGAAACGCAAATGCCCGGACTTGACGGAAGTAGACATCGAGAACCAGAGGAAACACAAGATTCTTCTTGGAAACTCGAGAACCGAGATAAAGGGTGGAATTATGGAACCGCAGAGCGTTCATAACTGTCCAGTGTGCGGTAGATTAGATTTCGCGACGAGCGCGCTTCTCGAAGCTCACTTGGAAAGAAATCATCCGGAATTCGCGGCAAAGTGCGACGCGTGTAAGCTTTCGTTCAAAAATCATCGGGTCCTCAATCTACACAGATTCATGACACACTATAGCGATAATTCGTGCGACAATAACGGGAGGAATTTACGAAATTCCGTTGTTGGCTTTCACGATCTGACATTCGTGGATTTTTCGTCGGATAAATTTCCAGCGATCGCGCGTGCCGTATGCGAACAATCGTTGCATCGTCCGGCATCCGGTGAAATGACTAAGTTTCAGTGCAGAAAGTGCATGCGTGGTTTTCCTTGCAGATCGGCTGTCGACGCTCACGAGATGGATTGCGGAGTGCTCAACCCGCAATCTCACGCCTTCAGAGACGGCCACTCAAGAAGGGACAACTTCTTCGCGGGTCTCGATCTGCAGAACAAGGATGCGCTCACCGAAGCAAAGGAGGGCAAAGATCTCGCAGACATACAGAGCATCATATCCGTGACGTCGGGACCGATACTCCAAAACTTTCCGCGCTCCGACGCGAGTACACCGGAGCATCAGATGAAGATTAATCCTAACCTTGGCTCGTCCGGTTCATCGGGCACACCGTCCTCCGAGTATCATCAGGAGGAGGAGGCACAGGATGCGTTCGCCGCTGAATTTCGTAAAATGAAGCTCAAAGGTGAATTCCCGTGTAGACTGTGTACAGCAGTTTTTCCAAATTTACGAGCTCTCAAAGGTCACAATCGTGCTCACATGGGCGTCGGACCGGGAATGCCCTATCCCTGCAACATGTGTCCCTATACGAGCACCGACAAGGCCACTCTCGTACGACATCTCAGATCTCACAATGGCGATCGCCCTTTCGAATGTTCCCTGTGTAATTACGCATTCACGACAAAAGCCAATTGCGAGAGGCACGTGAGAAATCGTCATGGAAAGCTCACCCGGGAGGATATTAAGAGCGTGCTTATTTATCATCCGAGCGAGGACCATACGAATGACGGATCGCTAGAGAGAAGCTCACCCCGAGGAATACGCGAGGATGCACGCAAGAGTCTAGTCTACCCGAACGAGCGAGATGAATTTTCTCATCAACAAGCCATCTACTCTGGAATATCTATGGAAACTAAACAAGATCTGGGCAGCATCTCGGACGACGGACACGCTCGTCCAATGGGCACGCAAACGTCCTGCGGAATCTCTTCCCTTGGCCATTACGAGAGATCCGAGAGTTTATCGAGAACCCCGAGCCGCGGTTTGCATTCGCTCGAATTCAAAAGCCACGGAATCGGCCAACATTTCGACAGACCTCACAACGATTTCATTGCAAGCTCAGATTTTAGTGGAAAACTCGAAGATGACATGGACTCGAGATCGTCGGAAGACGGAAGCGTTTCTCTAGTCAGTGATACCAAATCCGACGTTGTACACCAAAGAGTCGAAGCTAGTCCAATGGACTTGAAGACGAACCACCCTGCGGCTACCGGTATTGCCGCAGCAGCGGCAGGAGGAGAGACTTCTGCCTCGGGTACCGGCGAAGATGCACCGCTCGATCTCTCAATGGACGTTCTCGATCTGAGCAAGAAATCAAAAGGAGACTACAACGCTGGCGACCCGGCCATAAATTCCGAAGAcattggaagaaataaaaaagaattttacGACGCTACCAACCAATTTTTACTTACGCAGGCACTGTTGAAAGCTGGACAAGCCGGCAATCCCACAACCTCGCTCGAAGCTCTCTATGCCAACGCTCACATGATATACAGAAATTTTGGTGGTTTCTCGGCTGCCGGTGTAGGAGCCGGAATACTTCCGCCTTACTTGTTCAATCCTCACATGTTTGGTCAGGATTTTGCGATCAAGGACAGACTGCAAAAGGAACTGGTGCGCGGATTACAATTGACGAGCGGCGGGACTCTCGTGGAACCACCGATTGGTAATACCGCGTTTACCGGTGCTTATCCACAAGGTAGAGACATACCGGCGCATTCGATGAGCGAGCAGAGCGATTACGCGAAACTCATGTCTTCGAAATTGCCGAACAAGATGGTAAGCCCGAGAGAGAAGATCGACAACTTACCATCCTCGAATTCCGTTAAAATGGTTATAAAGAACGGGGTTTTAATGCCAAAGCAAAAGCAACGAAGGTACAGAACCGAGAGACCGTTCACGTGCGAACATTGCTCAGCGAGATTTACACTGAGAAGCAACATGGAGAGACACATTAAACAACAGCATCCCCAGTACTGGAGTCAGAGACCGAGGGGTGGTCACTCGACGAGAGGAAGACCACCAGCAAATCCACCGACTCTCTTGCACAATGCGAATCATCCTGGAAGCCAACAACTGCCACAGTCTTATCCGAATATCCTTCCGAAGATCGGACAATCCTCCACGGCGGTGGGTTACGAGAAACACGCTATTTCTGAACATGTGAAATACGCGATACTCGCGCAACACTTAAAAGGCAACAAGATCGAGGAGAACGACACCGAGGAAGAGTTGGTTATCGACGAAGGTGCTAACGAAAGAGAAACTAGAGATAATAACGAGACGATGATCAGAGAACGCCCGACGAGTCTATTGAGAGGAAAGCTCGAGGGAAGTAATTTGTACAAGGAGAGCAGCCTAAGACAAcagaaacaacaacagcagcaaggAACttgtgagctggtgaaaaaaaaatctaaagttGAGAAGAACggagacaacgacgacgacggtgACAACGACGTCGACGGCGACGAGGATGCCGACTACTCCGCGGATGATTGTTCCACGACGAAGGTAAAACTCGAGAATGCAGAACAAGAACACGAAGAAGATTCCAAGGACGACTGCGCCCCGAGCGAATTGTGCACTACGGTAATATCAAAAGACGAACAATGCACGCGCGACGGTATGAGCGAGAGGAACGAGGATGGTACGGCAGATCTTGCGAGTGTCTCGGAATTATTGGATAACGCTTCCCAGCAATATCAGCAATTTCAGCCTCAGTACATGAGCGACGAGGAGGGCCTCGTAGCCTCAACGAGCGATTGTAATAATTCTGGTAGCGACGAAAAATCCGATTCTATCAATTCAGCAAACTCGGCCAATTCGAATTCAtccaagaaaaagaagaagaaaaagaagaagaagaagaagaagaagaagtcagCGTACTCGATGGCACCAAACAGAGTCATATGTCCGTATTGCGAGAGACCGTTTCCCTGGACTTCGTCTCTCAGGCGACACATTCTCACACACACAGGACAAAAGCCTTATCAGTGCATGCATTGCTCGCTTCTGTTTACAACTAAATCAAATTGCGACCGTCACTTACTTAGAAAACACAAGAACAATGCGAATAAAATTCGTCGCATGAGAAATTCATCGTCACCCGAAGCACAAGAACAACCGTCCAATAACAACAGCAGTACGTTCGCCATGAGAAATGTACCCGAGAGACCATACAAGTGCAATTTATGCCCGAGCTCGACTTTCTCCACTTTGGGCAATCTTAAGAAGCACAAATCTTCGAAACACTCGCGCGGATTCAAATCCAGCAGGCCCGAGTCACCGGTTACCAGCGAACCACAAAATAGTCCAATGGCTTGCAACAAGCACAACGATCAGAGCGGCTACGAGAGTCAATCGTCCAGCATCTCGGACAACATGGACCAAGTTGAGAACATGGAGATCCAGGAACACGCTGAGGCACACGCGCAGAATCTGGAGAATgtgaaaaattctgaaaaagGCCAAGTCGATCTAAAAATAGAACTCGCTGCGAATCCCAATGGCATCGTGCGAGAGGCAGAAAACGTTGAGACGACGATGGATCCGCGTTATGCTGAAAACTTGGGGAATATGGAAACTATGGAGACCATCGAAGCCGCTTCTTCCGCATTGGATATCGGAGCCTCCAAAATTACCGATAACGCACCTCCTGCCACGAGTGACGCATCCAAATCTCGAAGGCCATCTCCGAGATCTTCGCCCGGTCCTACCGACGCACCTTTCAAATGCCATCTGTGCGACAGTGGATTCTCCGAACGTCAAGATTGCCTCGAACACATAAGGATCAACCATACGAGGTCCTATGAGATACTCGTGGCGAAGGGTGCTCTCGATATGGATATTGAGACACCCGAAGAACAACAGCTACCACCGCCCTCTCAACATCACAGCGATGGCGAAGAAAAACGAGGCAGATTTCCGGATTACAGCAATCGAAAGGTCGTTTGTGCGTTCTGCATGCGTCGTTTCTGGTCGGCTGAGGATTTAAGACGACACATGAGAACTCATACGGGTGAGAGACCATTCTCGTGCGACATATGCTGCCGACGTTTCACCCTTAAGCACAGTATGCTTCGACATCGCAAGAAACACGAGTCCGTCGACTCCACGATGTACGTGGGAACGAGCGGTGACGAGGAGTCCGGCCCTTCGCAACCGCCAACGATAACGCCGCGAAGTCAACAGCAGCAGGCATCTTTGGTGAGCACAACGAGCGGTGAGTCGAGGATTCAAGAAAGGATCTCCTTGCCAACAGTGGTGACTGTAGCAACGGGCGACGCCGCGCCCAGTGGCCTCATGCGTTTCAATCCCTACGAGAAGCTCACGACGCTCACAGGAAAATTGGCTAACGCCCAACAAAATTTTCATTCTCACGACGGTGCCGATACCGAAAATGACCTTATATCCAATCTCCTCGGTATTCGAGATAAGAGCATAATCGATAAGGTGCTGCAAGCATCGGCGGATGATGCAGCGAAACTTCTCGGCGTAAACAGAAATCATGACtga
Protein Sequence: MEKANGSRRSGTTTTTTVAAAVAARVTAKAENRAELRHINEKQTDAVSSPLGVDQQDGTYPCPACPIVLSSPHELSNHLRGHNSPRSTDYSGEDDYTCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGGLSPRENSCTDSEASSDSEKPTSKRRHVEEEYNNNEIAKTSSPDFIEHHDSPTFVAKRKCPDLTEVDIENQRKHKILLGNSRTEIKGGIMEPQSVHNCPVCGRLDFATSALLEAHLERNHPEFAAKCDACKLSFKNHRVLNLHRFMTHYSDNSCDNNGRNLRNSVVGFHDLTFVDFSSDKFPAIARAVCEQSLHRPASGEMTKFQCRKCMRGFPCRSAVDAHEMDCGVLNPQSHAFRDGHSRRDNFFAGLDLQNKDALTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPEHQMKINPNLGSSGSSGTPSSEYHQEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPFECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPSEDHTNDGSLERSSPRGIREDARKSLVYPNERDEFSHQQAIYSGISMETKQDLGSISDDGHARPMGTQTSCGISSLGHYERSESLSRTPSRGLHSLEFKSHGIGQHFDRPHNDFIASSDFSGKLEDDMDSRSSEDGSVSLVSDTKSDVVHQRVEASPMDLKTNHPAATGIAAAAAGGETSASGTGEDAPLDLSMDVLDLSKKSKGDYNAGDPAINSEDIGRNKKEFYDATNQFLLTQALLKAGQAGNPTTSLEALYANAHMIYRNFGGFSAAGVGAGILPPYLFNPHMFGQDFAIKDRLQKELVRGLQLTSGGTLVEPPIGNTAFTGAYPQGRDIPAHSMSEQSDYAKLMSSKLPNKMVSPREKIDNLPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQYWSQRPRGGHSTRGRPPANPPTLLHNANHPGSQQLPQSYPNILPKIGQSSTAVGYEKHAISEHVKYAILAQHLKGNKIEENDTEEELVIDEGANERETRDNNETMIRERPTSLLRGKLEGSNLYKESSLRQQKQQQQQGTCELVKKKSKVEKNGDNDDDGDNDVDGDEDADYSADDCSTTKVKLENAEQEHEEDSKDDCAPSELCTTVISKDEQCTRDGMSERNEDGTADLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSINSANSANSNSSKKKKKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKIRRMRNSSSPEAQEQPSNNNSSTFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRGFKSSRPESPVTSEPQNSPMACNKHNDQSGYESQSSSISDNMDQVENMEIQEHAEAHAQNLENVKNSEKGQVDLKIELAANPNGIVREAENVETTMDPRYAENLGNMETMETIEAASSALDIGASKITDNAPPATSDASKSRRPSPRSSPGPTDAPFKCHLCDSGFSERQDCLEHIRINHTRSYEILVAKGALDMDIETPEEQQLPPPSQHHSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEESGPSQPPTITPRSQQQQASLVSTTSGESRIQERISLPTVVTVATGDAAPSGLMRFNPYEKLTTLTGKLANAQQNFHSHDGADTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRNHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01207611; iTF_00653084; iTF_00841343; iTF_01364896; iTF_00058184; iTF_00905635; iTF_00721492; iTF_00059670; iTF_00398333; iTF_00397558; iTF_00058943;
90% Identity: -
80% Identity: -