Basic Information

Insect: Amblyjoppa proteus
Gene Symbol: RREB1
Assembly: GCA_963922035.1
Location: OY998228.1:16870580-16877649[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00094 0.09 13.7 0.0 1 23 55 77 55 77 0.98

2 15 0.0002 0.019 15.9 0.3 1 23 91 113 91 113 0.98

3 15 2.6e-07 2.5e-05 24.9 1.3 1 23 119 142 119 142 0.98

4 15 0.067 6.4 7.9 0.1 1 23 236 260 236 260 0.94

5 15 0.38 36 5.5 2.1 2 23 266 288 266 288 0.94

6 15 0.076 7.3 7.7 0.1 1 23 479 501 479 501 0.96

7 15 3.2e-05 0.0031 18.3 0.3 1 23 510 532 510 532 0.98

8 15 0.0021 0.2 12.6 2.9 1 23 538 561 538 561 0.97

9 15 0.00052 0.05 14.5 3.0 1 23 975 998 975 998 0.97

10 15 0.00075 0.072 14.0 0.1 3 23 1299 1319 1297 1319 0.97

11 15 1 1e+02 4.1 6.5 1 23 1325 1348 1325 1348 0.97

12 15 0.021 2 9.5 1.8 1 23 1388 1412 1388 1412 0.95

13 15 0.62 60 4.8 3.1 1 23 1559 1582 1559 1582 0.96

14 15 0.013 1.2 10.1 0.4 2 23 1632 1653 1631 1653 0.94

15 15 1.5 1.5e+02 3.6 8.2 1 23 1659 1681 1659 1681 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00094	0.09	13.7	0.0	1	23	55	77	55	77	0.98
2	15	0.0002	0.019	15.9	0.3	1	23	91	113	91	113	0.98
3	15	2.6e-07	2.5e-05	24.9	1.3	1	23	119	142	119	142	0.98
4	15	0.067	6.4	7.9	0.1	1	23	236	260	236	260	0.94
5	15	0.38	36	5.5	2.1	2	23	266	288	266	288	0.94
6	15	0.076	7.3	7.7	0.1	1	23	479	501	479	501	0.96
7	15	3.2e-05	0.0031	18.3	0.3	1	23	510	532	510	532	0.98
8	15	0.0021	0.2	12.6	2.9	1	23	538	561	538	561	0.97
9	15	0.00052	0.05	14.5	3.0	1	23	975	998	975	998	0.97
10	15	0.00075	0.072	14.0	0.1	3	23	1299	1319	1297	1319	0.97
11	15	1	1e+02	4.1	6.5	1	23	1325	1348	1325	1348	0.97
12	15	0.021	2	9.5	1.8	1	23	1388	1412	1388	1412	0.95
13	15	0.62	60	4.8	3.1	1	23	1559	1582	1559	1582	0.96
14	15	0.013	1.2	10.1	0.4	2	23	1632	1653	1631	1653	0.94
15	15	1.5	1.5e+02	3.6	8.2	1	23	1659	1681	1659	1681	0.98

Sequence Information

Coding Sequence: ATGGTCGGATACCACAGCGCTCCGGGCTTGACTACGAcagtagcagcagcaggagcAACAGCTACGGCGCCAGCCGAGAACGGACCGGATCATCGACACAACAGCGAGACACACACAGATGCAGCATCATCGCCATTGgcTGCAGATCAACAGGAAGGAGCTTATCCCTGTCCAGCCTGTCCGATAGTTCTCTCGACATCTCGGGACTTGACGAATCATCTCCGAGGTCACAATTCGCCGCGGAGCACCGATTACAGCGGCGAGGACGATTACTCCTGCGGTGTTTGTCACAAAGTTTTGAGCTCGGCGAGCTCGCTGGACCGTCACGTGCTCGTTCACTCCGGGGAGCGTCCGTTCAAGTGCAAGTATTGCGACATGGCGTTCACGACGAACGGCAACATGAACAGACATCTGAGAACCGCTCACGGTCGTCTGTCGCCTCGCGACAACAGTTACACGGACTCCGAGGCGAGCAGCGATTCGGAAAAACCGGCGAAGAGGCGACACGTCGAGGAATACAACAACAACGAGATCGCGAAGAGAAGCTCGCCCGATCTGATCGATCAACGGGCGTCGCCGACATTCGCAGCAAAGCGCAAGTGTCCCGACTTCGCCGACGACATAGAGAATCAGCGAAAGCACAAGATTCTTCTCGGTAACTCGAGAACCGAGATAAAGGGCGGTATGACGGAGACCCAGAACGTTCACAACTGTCCCGTCTGCGGTAGATTGGATTTTCCGACGAGCGCCCTTCTCGAGGCCCATCTGGAGCGCAATCATCCGGAGTTTCCGGCGAAGTGCGACGCGTGCAATCTCTCGTTCAAGAATCATCGGGTTCTCAATCTTCACCGATTCATGATACACTACGCGGAGAATTCTTTCGGCAATAACGCGAGAAATCTACGAAACTCCGTTGTCGGCTTTCACGATTTGACTTTCGTGGATTTCTCGTCGGAAAAGTTTCCGGCCATCGCGAGAGCTGTCTGCGAGCAGTCGCTGCATCGTCCGGCCTCGGGTGAGATAGCCAAGTTTCAGTGCTGCAAGTGCCTGAGGGCTTTTCCTTGCCGCTCGGCTCTGGACGGTCACGAGCTGGACTGCGGCGTGCCGAACTCGCAGGCGCGCGTCTACGGCGACGATCAGTCGAGGCGGGACGACTTCTTCGCTGGTCTCGATCTTCAGAACAAGGCCGCCCTCACCGAGGCCAAGGAGGGCAAGGATCTCGCCGACATACAGAGCATAATATCGGTCACCTCAGGACCGATACTGCAAAATTTTCCCCGTTCCGACGCGAGCACACCCGAGCACCAGATAAAGATGAATCCGAACGTCGGCTCGTCGGGCTCGTCGGGAACGCCGTCCTCGGAGTACCATCAGGAGGAGGAGGCGCAGGACGCGTTCGCCGCAGAATTTCGAAAGATGAAGCTCAAAGGCGAATTCCCGTGTCGACTGTGCACAGCTGTATTTCCGAATCTGCGAGCGCTCAAGGGCCACAATCGGGCTCACATGGGAGTGGGACCTGGAATGCCTTATCCCTGCAACATGTGCCCGTACACGAGCACCGACAAGGCGACTCTGGTGAGACACCTGAGGTCTCACAACGGCGATCGTCCGTTCGAGTGCTCGCTGTGCAACTACGCTTTCACGACAAAGGCCAATTGCGAGAGGCACGTGAGAAACCGTCACGGTAAATTGACCCGGGAGGACATAAAGAGCGTTTTGATTTATCACCCGAGCGAGGACTACACGAATGACGGATCACTCGAGAGAAGTTCACCGCGAGGAATACGGGAGGACGTTCGCAAGAGTCTGGTCTATCCGAACGAGCGCGACGATTACTGTCAGCAGCAGGCGCTCTATCCTGGAATGCCCGTGGAGACCAAGCAGGATCTCGGCAGCATGTCCGACGACGGACAACTCCGCTCGATGGCCATGCCGTCCATCCACGGAATGTCCCTTGGGCACTACGACAAAGCCGATCTGTTCGCGAGAACGCCGAGCGCCGGTGTTCATCCGCTGGAACTGAGCCACAGAGCCGTCGACGACACGGACAAGGCCCATCACGATCTCTCCTCGAAGTCCGACTTCGGTGGTAAGCTCGATTACGACATCGACTCGAGATCATCGGAGGACGGTAGCGTTTCTCTAGTCAGCGATACCAAACCCGATAATGTACACCAAAGAGTTCAAGCTAGTCCGATAGACCTCAAGAAGAACGCGACAGCGCCGGTCGTCGTCGGCGGCGGAGAAACCTCCACCTCGGTGACCGGCGAGGACGCGCCGCTGGATCTATCGATGGACGTCCTTGATCTTAGCAAGAAATCCAAaggaaacaacaacaacaacaacaacaacaacgccACGGAAACCCCGAGCAATCCCGATGAGCTTGGCAGAAACCAAAAGGAGTTCTACGACGCGACGAATCAGTTCTTGCTTACCCAGGCGCTTCTCAAGGTTGGACAAGCCGGAAATCCCACCACCTCGCTGGAAGCTCTCTACGCCAACGCGCATCTCATATACAGAAATTTCGGGGGTTTCTCGGCCGCGGGCGTCGGCGGTGGCATCCTGCCGCCTTATCTCTTCAATCCTCACATGTTCGGTCAGGACTTCGCTATGAAGGACCGACTGCAGAAGGAGCTCGTTCGCGGATTGCAATTGACGAGCGGCGGTACCCTCGTCGAACCGCCGATCGGCAATACGGCCTTCGCCGCCGCCTATCCTCAGGGCAGGGACATACCGGCTCACTCGATGAGCGAACAGAGCGACTACGCCAAGCTGATATCCTCGAAGCTGCCGAACAAGATGGTCAGCCCACGCGAGAAAATGGACAATTCGCAGTCGTCGAATTCCGTCAAGATGGTGATCAAGAACGGTGTCTTGATGCCGAAGCAGAAACAGCGGAGATACAGAACCGAGAGACCGTTCACATGCGAGCATTGCTCGGCCCGATTCACCCTCAGAAGCAACATGGAGAGACACATCAAGCAACAGCATCCCCAACACTGGAGTCAGAGGCCACGAGGCGGTCACTCGACGAGGGGAAGACCACCGGCGAATCCGCCGACTCTGCTGCACAACGCCAATCATCCAGGTGGGCAGCAACTGCCCCAGGCTTATCCCAGCATACTTCCGAAGATCGGACAGTCGTCGAGCTCGGTGGGTTACGAGAAACACTCGATATCCGATCAGGTGAAATACGCGATTCTGGCTCAACAGCTCAAAGGCAGCAAGATGGAGGAGAACGACACCGAGGAGGAATTGGTAATCGACGAGGGCACTCACGACCGGGAGGCCGCCGATCGCGAGGCTGATGGCGAGCGTCCGACGAGCCTCCTGCGAGGTAAACTCGAGGGAAGCAATCTGTACAAAGACAACGTCGCGAGACATCAGCACCAACAGCTCCAGCCCACCGAGTTGGTTAAGAAAAATTCTACGAAAGAGGAGTCCGACGATGACGGCGAGGATGCCGAGGACCACGAAGATTACTCGCCGGTGCACGTGAAGACCGAGCCCGAGGAGGAGAATCACGAGGACGACTCCAAGGACTGCACACCGAGCGAACTTTGCGTGACGGAGATGTCGAAGATCGAGCAATGCTCGCGCGACGGTATGAGCGAGAGAAACGAGGATGGCACGGCAGATCTGGCGAGCGTCTCCGAACTGCTCGACAACGCTTCGCAGCAGTACCAGCAGTTCCAGCCCCAGTACATGAGCGACGAGGAGGGCCTCGTCGCCTCGACGAGCGACTGCAACAACTCCGGTAGCGACGAGAAATCCGATTCTGTTAATTCGGCGAACTCCGCCAATTCTAATtcatcgaagaagaagaagaaaaagaagaagaagaagaagaagaagaagtccGCATACTCGATGGCGCCGAACAGAGTCATATGTCCTTACTGCGAGAGACCCTTCCCCTGGACGTCCTCGCTGAGACGGCACATCCTCACACACACCGGACAGAAGCCCTACCAGTGCATGCACTGCTCGCTCCTCTTCACGACGAAATCCAACTGCGATCGTCACCTGCTCAGAAAACACAAAAACAACGCGAACAAGATACGCCGAATGAGAAATTCATCGTCGCCCGAAGCACAAGAGGTACCGtccaacaacaacagcagcaccTTCGCGATGAGAAACGTTCCCGAGAGACCGTACAAATGCAATCTGTGCCCAAGCTCGACTTTCTCGACGCTCGGCAATCTCAAGAAGCACAAATCGTCGAAACACTCCAGAGGTTTCAAATCGCGAGCCGAATCACCGGTTACCAGCGAGCCGCAGAACAGTCCCGTACCGGGCAACAAGCAGAACGATCAGAGCGGCTACGAGAGCCAGTCGTCGAGCGTCTCCGACAATATGGATCACGTGGAGCGAATGGAGAGCGTCGAGCACGCCGAGGCGAATCCGGGGAACGCGGAGAACGGAAAGAGCTCCGAGAAGGAGAGAAACCCTGAGGAAGCGGACGACCACGAGACTGCGAAGGGCAACGAGACCGCCGAGCCGACCGAACAGCAGATCGACAACGCCGAGAGCGTCGATACCATTGAAAGCTCATCGGCCGCGGATGCCGGAGCGAAGACCAACGACTGCACCATTGCGTCGACGAACGAATCGTCGAAATCGCGAAGACCGTCACCGCGCTCCTCACCCGGTCCGACCGACGCACCATTCAAGTGCCATCTATGCGACAGCGGATTCTCCGAGCGTCAGGACTGCCTCGAACACATCAGGATCAATCACACGAGGTCCTACGAGATTCTGGTCGCCAAGGGAGCCCTCGACATGGACATCGAGACTCCCGAGGAACAACAACTTCCACCGCCACAACATCTAAGCGATGGCGAAGAGAAACGCGGCAGATTTCCCGATTACAGCAACAGGAAGGTTGTCTGTGCATTCTGCATGCGCCGTTTCTGGTCGGCGGAGGATCTTCGGCGTCACATGAGGACCCACACGGGCGAGCGGCCGTTCTCCTGCGACATATGCTGTCGTCGTTTCACGCTGAAGCACAGTATGCTCCGTCATCGTAAGAAGCACGAGTCCGTCGACTCGACGATGTACGTCGGAACGAGCGGCGACGAGGAGTCTGCGCCCTCGCAGCCTCCGACGATAACGCCCCGGAGTCAGCAACAGCAGGCGTCGATGGTGAGCACGACGAGCGGTGAGTCGAGAATTCAGGAGAGGATCTCCCTCCCGACAGTGGCGTCGGTGGCGACCGGTGACGCTGCACCGAGCGGCCTCATGAGGTTCAATCCCTATGAGAAACTCACAACTCTAACGGGAAAATTGGCAAACGCCCAGAAAGCGTTTAACTCGAGCGACGGTGCCGACACGGAAAATGACCTGATATCGAATCTCCTTGGTATTCGTGACAAAAGCATAATCGACAAGGTGCTCCAAGCGTCGGCCGATGACGCGGCGAAACTCCTCGGTGTCAACAGAAATCACGACTGA
Protein Sequence: MVGYHSAPGLTTTVAAAGATATAPAENGPDHRHNSETHTDAASSPLAADQQEGAYPCPACPIVLSTSRDLTNHLRGHNSPRSTDYSGEDDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGRLSPRDNSYTDSEASSDSEKPAKRRHVEEYNNNEIAKRSSPDLIDQRASPTFAAKRKCPDFADDIENQRKHKILLGNSRTEIKGGMTETQNVHNCPVCGRLDFPTSALLEAHLERNHPEFPAKCDACNLSFKNHRVLNLHRFMIHYAENSFGNNARNLRNSVVGFHDLTFVDFSSEKFPAIARAVCEQSLHRPASGEIAKFQCCKCLRAFPCRSALDGHELDCGVPNSQARVYGDDQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPEHQIKMNPNVGSSGSSGTPSSEYHQEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPFECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPSEDYTNDGSLERSSPRGIREDVRKSLVYPNERDDYCQQQALYPGMPVETKQDLGSMSDDGQLRSMAMPSIHGMSLGHYDKADLFARTPSAGVHPLELSHRAVDDTDKAHHDLSSKSDFGGKLDYDIDSRSSEDGSVSLVSDTKPDNVHQRVQASPIDLKKNATAPVVVGGGETSTSVTGEDAPLDLSMDVLDLSKKSKGNNNNNNNNNATETPSNPDELGRNQKEFYDATNQFLLTQALLKVGQAGNPTTSLEALYANAHLIYRNFGGFSAAGVGGGILPPYLFNPHMFGQDFAMKDRLQKELVRGLQLTSGGTLVEPPIGNTAFAAAYPQGRDIPAHSMSEQSDYAKLISSKLPNKMVSPREKMDNSQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLHNANHPGGQQLPQAYPSILPKIGQSSSSVGYEKHSISDQVKYAILAQQLKGSKMEENDTEEELVIDEGTHDREAADREADGERPTSLLRGKLEGSNLYKDNVARHQHQQLQPTELVKKNSTKEESDDDGEDAEDHEDYSPVHVKTEPEEENHEDDSKDCTPSELCVTEMSKIEQCSRDGMSERNEDGTADLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSANSNSSKKKKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKIRRMRNSSSPEAQEVPSNNNSSTFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRGFKSRAESPVTSEPQNSPVPGNKQNDQSGYESQSSSVSDNMDHVERMESVEHAEANPGNAENGKSSEKERNPEEADDHETAKGNETAEPTEQQIDNAESVDTIESSSAADAGAKTNDCTIASTNESSKSRRPSPRSSPGPTDAPFKCHLCDSGFSERQDCLEHIRINHTRSYEILVAKGALDMDIETPEEQQLPPPQHLSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEESAPSQPPTITPRSQQQQASMVSTTSGESRIQERISLPTVASVATGDAAPSGLMRFNPYEKLTTLTGKLANAQKAFNSSDGADTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRNHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00414570;
90% Identity: iTF_00905635; iTF_00059670; iTF_00721492; iTF_01364896; iTF_00058184; iTF_00397558; iTF_00398333; iTF_00841343;
80% Identity: -