Basic Information

Insect: Stenichneumon culpator
Gene Symbol: RREB1
Assembly: GCA_964017025.1
Location: OZ024773.1:13124513-13130516[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00095 0.092 13.7 0.0 1 23 80 102 80 102 0.98

2 15 0.0002 0.019 15.8 0.3 1 23 116 138 116 138 0.98

3 15 2.7e-07 2.6e-05 24.9 1.3 1 23 144 167 144 167 0.98

4 15 0.067 6.5 7.9 0.1 1 23 261 285 261 285 0.94

5 15 0.71 69 4.7 2.2 2 23 291 313 291 313 0.93

6 15 0.077 7.5 7.7 0.1 1 23 504 526 504 526 0.96

7 15 3.3e-05 0.0032 18.3 0.3 1 23 535 557 535 557 0.98

8 15 0.0021 0.2 12.6 2.9 1 23 563 586 563 586 0.97

9 15 0.00053 0.051 14.5 3.0 1 23 999 1022 999 1022 0.97

10 15 0.00076 0.074 14.0 0.1 3 23 1323 1343 1321 1343 0.97

11 15 1.1 1e+02 4.1 6.5 1 23 1349 1372 1349 1372 0.97

12 15 0.021 2.1 9.4 1.8 1 23 1412 1436 1412 1436 0.95

13 15 0.63 60 4.8 3.1 1 23 1583 1606 1583 1606 0.96

14 15 0.013 1.3 10.1 0.4 2 23 1656 1677 1655 1677 0.94

15 15 1.5 1.5e+02 3.6 8.2 1 23 1683 1705 1683 1705 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00095	0.092	13.7	0.0	1	23	80	102	80	102	0.98
2	15	0.0002	0.019	15.8	0.3	1	23	116	138	116	138	0.98
3	15	2.7e-07	2.6e-05	24.9	1.3	1	23	144	167	144	167	0.98
4	15	0.067	6.5	7.9	0.1	1	23	261	285	261	285	0.94
5	15	0.71	69	4.7	2.2	2	23	291	313	291	313	0.93
6	15	0.077	7.5	7.7	0.1	1	23	504	526	504	526	0.96
7	15	3.3e-05	0.0032	18.3	0.3	1	23	535	557	535	557	0.98
8	15	0.0021	0.2	12.6	2.9	1	23	563	586	563	586	0.97
9	15	0.00053	0.051	14.5	3.0	1	23	999	1022	999	1022	0.97
10	15	0.00076	0.074	14.0	0.1	3	23	1323	1343	1321	1343	0.97
11	15	1.1	1e+02	4.1	6.5	1	23	1349	1372	1349	1372	0.97
12	15	0.021	2.1	9.4	1.8	1	23	1412	1436	1412	1436	0.95
13	15	0.63	60	4.8	3.1	1	23	1583	1606	1583	1606	0.96
14	15	0.013	1.3	10.1	0.4	2	23	1656	1677	1655	1677	0.94
15	15	1.5	1.5e+02	3.6	8.2	1	23	1683	1705	1683	1705	0.98

Sequence Information

Coding Sequence: ATGTGGCGCGGATCAGCGGGAACCTTCGAGACAAATAAGATTCCGCCGGGATATACGAGAGCGACTCACGAATATATGTTTCGTATTGTTTTTGTGATTACAGTGACTACGAcagtagcagcagcaggagcaaCAGCTACGGCGCCAGCCGAGAACGGACCGGATCATCGACACAGCAGCGAGACACACACAGATGCAGCATCATCGCCATTGgctgCAGATCAACAGGAAGGAGCTTATCCGTGTCCAGCCTGTCCGATAGTTCTCTCGACATCTCGGGACTTGACGAATCATCTCCGAGGTCACAATTCGCCGCGAAGCACCGATTACAGCGGCGAGGACGATTACTCCTGCGGTGTTTGTCACAAAGTTTTGAGCTCGGCGAGCTCGCTGGACCGTCACGTGCTCGTTCACTCTGGGGAGCGTCCGTTCAAGTGCAAGTATTGCGACATGGCGTTCACGACGAACGGCAATATGAACAGACATCTGAGAACTGCTCACGGTCGTCTGTCGCCTCGCGACAACAGTTACACGGATTCGGAGGCGAGCAGCGATTCGGAAAAACCGGCGAAGAGGCGTCACGTCGAGGAATACAACAACAATGAGATCGCGAAGAGAAGCTCCCCTGATCTCATCGACCAACGAGCGTCGCCGACCTTCGCGGCAAAGCGCAAGTGTCCCGACTTTGCCGACGACATAGACAATCAGAGAAAGCACAAGATTCTTCTCGGTAACTCGAGAACCGAGATAAAGGGCGGAATGACGGAGACCCAGAACGTTCACAACTGTCCCGTCTGCGGTAGATTGGATTTTCCGACGAGCGCCCTTCTCGAGGCCCATCTGGAGCGCAATCATCCGGAGTTTCCGGCGAAGTGCGACGCGTGCAATCTATCGTTCAAGAATCATCGGGTTCTCAATCTTCACAAATTCATGATACATTACGCGGAAAATTCTTTCGGTAATAACGCGAGAAATCTACGAAACTCCGTTGTCGGCTTTCACGATTTGACTTTCGTGGATTTCTCGTCGGAAAAGTTTCCGGCAATTGCGAGAGCGGTCTGCGAGCAGTCGCTGCATCGTCCGGCCTCGGGTGAGATAGCGAAGTTTCAGTGCTGCAAGTGCCTGAGGGCTTTTCCTTGCCGTTCGGCTCTGGACGGTCACGAGATAGACTGCGGCGTGACGAACTCGCAGGCGCGCGTTTACGGCGACGATCAGTCGAGGAGGGACGACTTCTTTGCCGGTCTCGATCTTCAGAACAAGGCGGCTCTCACCGAGGCCAAGGAGGGCAAGGATCTCGCCGACATACAGAGCATAATATCCGTCACCTCCGGACCGATACTGCAAAATTTTCCCCGTTCGGACGCGAGCACACCCGAGCATCAGATAAAGATGAATCCGAACGTGGGCTCGTCGGGCTCGTCGGGAACACCGTCCTCGGAGTACCATCAGGAGGAAGAGGCTCAGGACGCGTTCGCCGCAGAATTTCGAAAGATGAAGCTCAAAGGCGAATTCCCGTGTCGACTCTGCACAGCTGTATTTCCGAATCTGCGAGCGCTCAAGGGCCACAATCGGGCTCACATGGGAGTAGGACCTGGAATGCCCTATCCCTGCAACATGTGCCCGTACACGAGCACCGACAAGGCGACTCTGGTGAGACACCTGAGGTCTCACAACGGCGATCGTCCGTTCGAGTGCTCGCTGTGCAACTACGCTTTCACGACAAAGGCGAATTGCGAGAGGCACGTGAGAAACCGTCACGGTAAATTGACCCGGGAGGACATAAAGAGCGTTTTGATTTATCACCCGAGCGAGGACTACACGAACGACGGATCCCTCGAGAGAAGTTCGCCGCGAGGAATACGGGAGGACGTTCGCAAGAGTCTGGTCTATCCGAACGAGCGGGACGATTACTGTCAGCAGCAGGCTCTCTACCCTGGAATGCCCGTGGAGACTAAGCAGGATCTCGGTAGTATGTCCGACGACGGACAACTCCGCTCGATGGCCATACCGTCCATCCACGGAATGTCCCTGGGTCACTACGACAAATCCGATCTGTTCGCGAGAACGCCGAGCGCCGGTGTTCATCCGCTGGAACTCAGCCACAGAGCCGTCGACGATACCGACAAGGCCCATCACGATCTCTCGTCGAAGTCGGACTTCGGTGGTAAACTCGATTACGACATCGACTCGAGATCATCGGAGGACGGTAGCGTTTCTCTAGTCAGCGATACCAAACCGGATACTGTACACCAAAGAGTTCAAGCTAGTCCGATAGATCTCAAGAAGAACGCGACAGCGCCGGTTGTCGTCGGCGGTGGAGAAACCTCCACCTCGGTCACCGGCGAGGACGCGCCTCTGGATCTATCGATGGACGTCCTTGATCTTAGCAAAAAATCCAAaggaaacaacaacaacaacaacaacaaccccACGGAAACCCCGAACAATCCCGACGAGCTTGGCAGAAACCAGAAGGAATTCTACGACGCGACCAATCAATTCTTGCTTACCCAGGCGCTTCTCAAGGCTGGACAGGCCGGAAATCCCACCACCTCGCTGGAGGCTCTCTACGCCAACGCGCATCTCATATACAGAAACTTCGGGGGTTTCTCGGCCGCCGGTGTCGGCGGCGGCATACTGCCGCCTTATCTGTTCAATCCTCACATGTTCGGTCAGGACTTCGCGATGAAGGACCGACTGCAGAAGGAGCTTGTTCGCGGATTGCAATTGACGAGCGGCGGCACCCTCGTCGAACCGCCGATCGGCAACACGGCCTTCGCCGCCGCCTATCCTCAGGGCAGAGACATACCGGCTCACTCGATGAGCGAACAGAGCGACTACGCCAAGCTGATGTCCTCGAAGCTGCCGAACAAGATGGTCAGCCCGCGTGAGAAAATGGACAACTCGCAATCGTCGAATTCCGTTAAGATGGTGATAAAGAACGGTGTCTTGATGCCAAAGCAGAAACAACGGAGATACAGAACCGAGAGACCGTTCACTTGCGAGCATTGCTCGGCCCGATTTACCCTGAGAAGCAACATGGAGAGACATATCAAGCAACAGCACCCCCAACACTGGAGTCAGAGGCCCCGCGGTGGTCATTCGACGAGGGGAAGACCACCGGCGAATCCGCCGACTCTGTTGCACAACGCCAATCATCCCGGTGGGCAACAACTGCCCCAGGCTTATCCCAGCATACTTCCGAAGATCGGACAGTCGTCGAGCTCGGTGGGATACGAGAAACACTCGATATCCGATCAGGTAAAATACGCGATTCTAGCTCAACAGCTCAAAGGCAGCAAGATGGAGGAGAACGACACCGAGGAGGAATTGGTCATCGACGAGGGTGCTCACGACCGGGAGGCCGTCGATCACGAGGCTGATGGCGCGCGTCCGACGAGCCTGCTGCGAGGAAAGCTCGAGGGAAGCAATCTGTACAAAGACAACGTCGCGAGACATCAGCACCAACAGCTCCAGGCTACCGAGTtggttaagaaaaattctacGAAAGAGGAATCCGACGATGACGGTGAGGATGCCGAGGATCACGAAGATTATTCGCCGGTGCACGTTAAGACCGAGCCCGAGGAGGACAATCACGAGGACGAATCCAAGGACTGCACACCGAGCGAACTTTGCGTGACGGAGATGTCGAAGATCGAGCAATGCTCGCGGGACGGTATGAGCGAGAGAAACGAGGATGGCACGGCTGATCTGGCGAGCGTCTCCGAACTGCTGGACAACGCTTCTCAGCAGTATCAGCAATTCCAGCCCCAGTACATGAGCGACGAGGAGGGCCTCGTCGCATCGACGAGCGACTGCAACAACTCCGGCAGCGACGAGAAATCCGATTCAGTTAATTCGGCAAACTCGGGCAATTCAAATTcatcgaagaaaaagaagaaaaagaagaagaagaagaagaagaagaagtccGCATACTCGATGGCGCCGAACAGAGTCATATGTCCGTACTGCGAGAGACCGTTCCCCTGGACGTCATCGCTGAGACGGCACATCCTCACACACACCGGACAGAAACCCTACCAGTGCATGCACTGCTCGCTCCTCTTCACGACGAAATCTAACTGCGACCGTCACTTGCTCagaaaacacaaaaacaaCGCGAATAAGATACGCCGAATGAGAAACTCATCGTCGCCCGAGGCTCAAGAGGTACCGTcaaacaacaacagcagcaccTTCGCAATGAGAAACGTTCCCGAGAGACCGTACAAATGCAATCTGTGTCCAAGCTCGACTTTCTCGACACTCGGCAATCTCAAGAAGCACAAATCGTCGAAACACTCAAGAGGTTTCAAATCGCGGCCCGAATCGCCGGTTACCAGCGAGCCGCAGAACAGTCCCGTACCGGGCAACAAGCAGAACGATCAGAGCGGCTACGAGAGCCAGTCGTCGAGCGTCTCCGACAATATGGATCACATGGAGCGAATTGAGAGCATGGAACACGCCGAGGCGAATCCGGAGAGCGCGGAGAACGGAAAGAGTTCCGAGAAGGAGAAAAACTCGGAGGAAGCGGAGGACCACGAGACAGCGAAAGGCAGCGAGACCGCTGAAACGACCCAACAGCAGATCGACAATGCCGAGAACGTCGATACCATGGAAAGCTCATCGGCCGCGGATACCGGAGCGAAGACCAACGACTGTACCCTTGCGTCGACAAACGAATCGTCGAAATCGCGAAGACCGTCACCGCGCTCCTCACCCGGCCCGACGGACGCACCGTTCAAGTGCCATCTCTGCGACAGCGGATTCTCCGAGCGTCAGGACTGCCTCGAACACATCAGGATCAATCACACGAGGTCCTACGAAATACTGGTCGCCAAGGGAGCCCTCGACATGGATATTGAGACTCCCGAGGAACAACAACTTCCACCGCCACAACATCTCAGCGATGGCGAAGAAAAACGCGGCAGATTTCCCGATTACAGCAACAGGAAGgTTGTCTGTGCATTCTGCATGCGCCGTTTCTGGTCGGCGGAGGATCTTCGCCGTCACATGAGGACCCACACAGGCGAGCGACCGTTCTCCTGCGACATATGCTGCCGTCGTTTCACCCTGAAGCACAGTATGCTCCGCCATCGTAAGAAGCACGAGTCCGTCGACTCGACGATGTACGTCGGAACGAGCGGGGACGAGGAGTCCGCGCCCTCGCAACCTCCGACGATAACGCCCCGGAGTCAGCAACAGCAGGCGTCGATGGTGAGCACGACGAGCGGTGAGTCGAGAATTCAGGAGAGGATCTCTCTCCCGACAGTGGCGTCGGTGGCGACCGGTGACGCCGCACCGAGCGGCCTCATGAGGTTCAATCCCTACGAGAAACTCACAACTCTAACGGGAAAATTGGCGAACGCCCAGAAAGCGTTTAACTCGAGCGACGGTGCCGACACGGAAAATGACCTGATATCGAATCTCCTTGGTATTCGTGACAAAAGCATAATCGACAAGGTGCTCCAAGCATCGGCCGATGACGCGGCGAAACTCCTCGGTGTCAACAGAAATCACGACTGA
Protein Sequence: MWRGSAGTFETNKIPPGYTRATHEYMFRIVFVITVTTTVAAAGATATAPAENGPDHRHSSETHTDAASSPLAADQQEGAYPCPACPIVLSTSRDLTNHLRGHNSPRSTDYSGEDDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGRLSPRDNSYTDSEASSDSEKPAKRRHVEEYNNNEIAKRSSPDLIDQRASPTFAAKRKCPDFADDIDNQRKHKILLGNSRTEIKGGMTETQNVHNCPVCGRLDFPTSALLEAHLERNHPEFPAKCDACNLSFKNHRVLNLHKFMIHYAENSFGNNARNLRNSVVGFHDLTFVDFSSEKFPAIARAVCEQSLHRPASGEIAKFQCCKCLRAFPCRSALDGHEIDCGVTNSQARVYGDDQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPEHQIKMNPNVGSSGSSGTPSSEYHQEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPFECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPSEDYTNDGSLERSSPRGIREDVRKSLVYPNERDDYCQQQALYPGMPVETKQDLGSMSDDGQLRSMAIPSIHGMSLGHYDKSDLFARTPSAGVHPLELSHRAVDDTDKAHHDLSSKSDFGGKLDYDIDSRSSEDGSVSLVSDTKPDTVHQRVQASPIDLKKNATAPVVVGGGETSTSVTGEDAPLDLSMDVLDLSKKSKGNNNNNNNNPTETPNNPDELGRNQKEFYDATNQFLLTQALLKAGQAGNPTTSLEALYANAHLIYRNFGGFSAAGVGGGILPPYLFNPHMFGQDFAMKDRLQKELVRGLQLTSGGTLVEPPIGNTAFAAAYPQGRDIPAHSMSEQSDYAKLMSSKLPNKMVSPREKMDNSQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLHNANHPGGQQLPQAYPSILPKIGQSSSSVGYEKHSISDQVKYAILAQQLKGSKMEENDTEEELVIDEGAHDREAVDHEADGARPTSLLRGKLEGSNLYKDNVARHQHQQLQATELVKKNSTKEESDDDGEDAEDHEDYSPVHVKTEPEEDNHEDESKDCTPSELCVTEMSKIEQCSRDGMSERNEDGTADLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSGNSNSSKKKKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKIRRMRNSSSPEAQEVPSNNNSSTFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRGFKSRPESPVTSEPQNSPVPGNKQNDQSGYESQSSSVSDNMDHMERIESMEHAEANPESAENGKSSEKEKNSEEAEDHETAKGSETAETTQQQIDNAENVDTMESSSAADTGAKTNDCTLASTNESSKSRRPSPRSSPGPTDAPFKCHLCDSGFSERQDCLEHIRINHTRSYEILVAKGALDMDIETPEEQQLPPPQHLSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEESAPSQPPTITPRSQQQQASMVSTTSGESRIQERISLPTVASVATGDAAPSGLMRFNPYEKLTTLTGKLANAQKAFNSSDGADTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRNHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00414570;
90% Identity: iTF_00058943;
80% Identity: -