Basic Information

Insect: Exephanes ischioxanthus
Gene Symbol: RREB1_1
Assembly: GCA_958510785.1
Location: OY294017.1:4764519-4771764[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00099 0.083 13.7 0.0 1 23 57 79 57 79 0.98

2 15 0.00021 0.017 15.9 0.3 1 23 93 115 93 115 0.98

3 15 2.8e-07 2.3e-05 24.9 1.3 1 23 121 144 121 144 0.98

4 15 0.07 5.9 7.9 0.1 1 23 238 262 238 262 0.94

5 15 0.4 33 5.5 2.1 2 23 268 290 268 290 0.94

6 15 0.08 6.8 7.7 0.1 1 23 481 503 481 503 0.96

7 15 3.4e-05 0.0029 18.3 0.3 1 23 512 534 512 534 0.98

8 15 0.0022 0.18 12.6 2.9 1 23 540 563 540 563 0.97

9 15 0.00055 0.047 14.5 3.0 1 23 975 998 975 998 0.97

10 15 0.00079 0.067 14.0 0.1 3 23 1299 1319 1297 1319 0.97

11 15 1.1 93 4.1 6.5 1 23 1325 1348 1325 1348 0.97

12 15 0.022 1.9 9.5 1.8 1 23 1388 1412 1388 1412 0.95

13 15 0.65 55 4.8 3.1 1 23 1558 1581 1558 1581 0.96

14 15 0.014 1.1 10.1 0.4 2 23 1631 1652 1630 1652 0.94

15 15 1.6 1.3e+02 3.6 8.2 1 23 1658 1680 1658 1680 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00099	0.083	13.7	0.0	1	23	57	79	57	79	0.98
2	15	0.00021	0.017	15.9	0.3	1	23	93	115	93	115	0.98
3	15	2.8e-07	2.3e-05	24.9	1.3	1	23	121	144	121	144	0.98
4	15	0.07	5.9	7.9	0.1	1	23	238	262	238	262	0.94
5	15	0.4	33	5.5	2.1	2	23	268	290	268	290	0.94
6	15	0.08	6.8	7.7	0.1	1	23	481	503	481	503	0.96
7	15	3.4e-05	0.0029	18.3	0.3	1	23	512	534	512	534	0.98
8	15	0.0022	0.18	12.6	2.9	1	23	540	563	540	563	0.97
9	15	0.00055	0.047	14.5	3.0	1	23	975	998	975	998	0.97
10	15	0.00079	0.067	14.0	0.1	3	23	1299	1319	1297	1319	0.97
11	15	1.1	93	4.1	6.5	1	23	1325	1348	1325	1348	0.97
12	15	0.022	1.9	9.5	1.8	1	23	1388	1412	1388	1412	0.95
13	15	0.65	55	4.8	3.1	1	23	1558	1581	1558	1581	0.96
14	15	0.014	1.1	10.1	0.4	2	23	1631	1652	1630	1652	0.94
15	15	1.6	1.3e+02	3.6	8.2	1	23	1658	1680	1658	1680	0.98

Sequence Information

Coding Sequence: ATGGTCGGATACCACAGCGCTCCGTGCTTGACTACGACAGTAGCAGCAGCCGGAGCAACAGCTACAGCGCCAGCCGAGAACGGACCGGATCATCGacacagcaacagcagcgagACACACACAGATGCAGCATCATCGCCATTGgctGCAGATCAACAGGAAGGAGCTTATCCGTGTCCAGCCTGTCCGATAGTTCTCTCGACATCTCGGGACTTGACGAATCATCTCCGAGGTCACAATTCGCCGCGAAGCACCGATTACAGCGGCGAGGACGATTACTCCTGCGGTGTTTGTCACAAAGTTTTGAGCTCGGCGAGTTCGCTGGACCGTCACGTCCTCGTTCACTCTGGGGAGCGTCCGTTCAAGTGCAAGTATTGCGACATGGCGTTCACCACGAACGGCAACATGAACAGACATCTGAGAACCGCTCACGGTCGTCTGTCGCCCCGCGACAACAGTTACACGGATTCCGAGGCGAGCAGCGATTCGGAAAAACCGGCGAAGAGGCGCCACGTAGAGGAATACAACAACAACGAGATCGCGAAGAGAAGCTCACCCGATCTGATCGATCAACGAGCGTCGCCGACCTTCGCGGCAAAGCGCAAGTGTCCCGACTTCGCCGACGACGTGGAGAATCAGAGAAAGCACAAGATTCTACTCGGTAACTCGAGAACCGAGATAAAGGGCGGTATGACGGAAACCCAGAACGTTCACAACTGTCCCGTTTGCGGTAGATTGGATTTTCCTACCAGCGCCCTTCTCGAGGCCCACCTGGAGCGCAATCATCCGGAGTTTCCGGCGAAGTGCGACGCGTGCAATCTCTCGTTCAAGAACCATCGTGTTCTCAATCTTCACAGATTCATGATACACTACGCGGAAAATTCTTTCGGCAACAACGCGAGAAATCTACGAAATTCCGTTGTCGGCTTTCACGATTTGACTTTCGTTGATTTCTCGTCGGAAAAGTTTCCGGCAATCGCGAGGGCGGTCTGCGAGCAGTCGCTGCATCGTCCGGCCTCGGGTGAGATAGCGAAGTTTCAATGCTGCAAGTGCCTGAGGGCTTTTCCATGCCGCTCGGCTCTGGACGGCCACGAGTTGGACTGCGGCGTGCCGAACTCGCAGGCGCGCGTCTACGGCGACGATCAGTCGCGGAGGGACGACTTCTTCGCCGGTCTCGATCTTCAGAACAAGGCCGCTCTCACCGAGGCCAAGGAGGGCAAGGATCTCGCGGACATACAGAGCATAATATCCGTCACCTCGGGACCGATACTGCAAAATTTCCCCCGTTCAGACGCGAGCACACCCGAGCATCAGATAAAGATGAATCCCAATGTCGGCTCGTCCGGCTCTTCGGGAACACCGTCCTCCGAGTACCATCAGGAGGAAGAGGCGCAGGACGCGTTCGCCGCAGAATTTCGAAAGATGAAGCTCAAGGGCGAATTCCCGTGTCGACTCTGCACAGCTGTATTTCCGAATCTGCGAGCGCTCAAGGGCCACAATCGGGCTCACATGGGAGTTGGACCTGGAATGCCTTATCCCTGCAACATGTGCCCTTACACGAGCACCGACAAGGCGACTCTGGTGAGACACCTGAGGTCTCACAACGGCGATCGTCCGTTCGAGTGCTCGCTGTGCAACTACGCTTTCACGACAAAGGCGAATTGCGAGAGGCACGTGAGAAACCGTCACGGTAAATTGACCCGGGAGGACATAAAGAGCGTTTTGATTTATCATCCGAGCGAGGACTACACGAACGACGGATCCCTCGAGAGAAGTTCGCCGCGAGGAATACGGGAGGACGTTCGCAAGAGTCTGGTGTATCCGAACGAGCGGGACGATTACTGTCAGCAGCAGGCTCTCTACCCCGGAATGCCCGTGGAGACTAAGCAGGATCTCGGTAGCATTTCCGACGACGGACAACTCCGCTCGATGGCCATACCGTCCATCCACGGAATGTCCCTGGGCCACTACGACAAATCCGATATATTCGCGAGAACGCCGAGCGTCGGTGTTCATCCGCTCGAACTCAGCCACAGAGCCGTCGACGATACCGACAAGGCCCATCACGATCTCTCGTCGAAGTCGGACTTCGGTGGTAAACTCGATTACGACATCGACTCGAGATCATCGGAGGACGGTAGCGTTTCTCTAGTCAGCGATACCAAACCGGATAATGTACACCAAAGAGCTCAAGCTAGTCCGATAGACCTCAAGAAGAACGCGACAGCGCCGGTTGTCGTCGGCGGTGGAGAGACCTCCACCTCGGTGACCGGCGAGGACGCACCGCTGGATCTATCGATGGACGTTCTTGATCTTAGCAAAAAATCCAAAGgaaccaacaacaacaacaacaacgccACGGAAACCCCGAACAATCCCGACGAGCTTGGAAGAAACCAAAAGGAATTCTACGACGCGACGAATCAATTCTTGCTTACCCAGGCGCTTCTCAAGGCTGGACAGGCCGGAAATCCCGCGACCTCGCTGGAAGCTCTCTACGCCAACGCGCACCTCATATACAGAAATTTCGGGGGTTTCTCGGCCGCCGGTGTCGGCGGTGGAATACTGCCGCCTTATCTCTTCAATCCTCACATGTTCGGTCAGGACTTCGCTATGAAGGACCGACTGCAGAAGGAGCTTGTTCGCGGATTGCAATTGACGAGCGGCGGCACCCTCGTTGAACCCCCGATCGGCAACACGGCCTTCGCCGCCGCCTATCCTCAGGGAAGAGACATACCGGCTCACTCGATGAGCGAACAGAGCGACTACGCCAAGCTGATGTCCTCGAAGCTGCCGAACAAGATGGTCAGCCCGCGTGAGAAAATGGAAAACTCGCAATCATCGAATTCCGTTAAGATGGTGATAAAGAACGGTGTCTTGATGCCAAAGCAGAAACAACGGAGATACAGAACCGAGAGACCGTTCACCTGCGAGCATTGCTCCGCCCGATTTACCCTGCGAAGCAACATGGAGAGACACATCAAGCAACAGCATCCCCAACACTGGAGTCAGAGGCCCCGAGGCGGTCACTCGACGAGGGGACGACCACCCGCGAATCCGCCGACTTTGCTGCACAACGCCAATCATCCCGGTGGGCAACAACTGCCACAGGCTTATCCCAGCATACTTCCGAAGATCGGACAGTCGTCGAGCTCGGTCGGATACGAGAAACACTCGATATCCGATCAGGTAAAATACGCGATTCTAGCCCAACAGCTCAAAGGCAGCAAGATGGAGGAGAACGACACCGAGGAGGAATTGGTAATCGACGAGGGTGCTCACGACCGGGAGGCCGTCGATCACGAGGCTGACGGTGAGCGTCCGACGAGCCTGCTGCGAGGAAAGCTGGAGGGAAGCAATCTGTACAAAGACAACGTCGCGAGACATCAACACCAACAGCTTCAGGCCACCGAGTtggttaagaaaaattctacGAAAGAGGAAACCGACGATGACGGCGAGGACGCCGAGGACCGCGAAGATTATTCGCCGGTGCACGTTAAGACCGAGCCCGAGGAGGACAATCACGAGGACGAATCCAAGGATTGCACACCGAGCGAACTTTGCGTGACGGAGATGTCGAAGATCGAGCAATGCTCGCGGGACGGTATGAGCGAGAGAAACGAGGACGGCACGGCAGATCTGGCGAGCGTCTCCGAACTGCTGGACAACGCTTCCCAGCAGTATCAGCAGTTCCAGCCCCAGTACATGAGCGACGAGGAGGGCCTCGTCGCGTCGACGAGCGACTGCAACAACTCCGGTAGCGACGAGAAATCCGATTCCGTCAATTCGGCAAACTCTGGCAATTCAAATtcatcgaagaagaagaagaaaaagaagaagaagaagaagaagaagaagtccGCATACTCGATGGCGCCGAACAGAGTCATATGCCCTTACTGCGAGAGACCGTTCCCCTGGACGTCCTCGCTGAGGCGGCACATCCTAACACACACCGGACAGAAACCCTACCAGTGCATGCACTGCTCCCTCCTCTTCACGACGAAATCCAACTGCGATCGTCACTTGCTcagaaaacacaaaaacaacGCGAACAAGATACGCCGAATGAGAAACTCATCCTCGCCCGAGGCCCAAGAGGTGCCGtccaacaacaacagcagcacaTTCGCAATGAGAAACGTTCCCGAGAGACCGTACAAGTGCAATCTGTGCCCAAGCTCGACTTTCTCGACACTCGGCAATCTAAAGAAGCACAAATCGTCGAAACACTCCAGAGGATTCAAATCGAGGGCCGAATCGCCGGTTACCAGCGAGCCGCAGAACAGTCCCGTACCGGGCAACAAGCAGAACGATCAGAGCGGCTACGAGAGCCAGTCGTCGAGTGTCTCCGACAATATGGATCACATGGAGCGAATGGAGAGCATGGAAAACGCCGATGCGAATCCGGAGAACCCGGAGAACGGAAAGAGTTCCGAGAAGGAGAGAAACTCGGAGGAAGCGGAGGACGAGACAGCGAAGGGCAACGAGACCGCTGAAACTACCGAACAGCAGATCGACAACGCCGATAACGTCGATACCATGGAAAGCTCATCGGCCGTGGACACCGGAGCGAAGACCAACGACTGTACCCTCGCGTCGACGAACGAATCGTCGAAATCTCGAAGACCGTCACCGCGCTCCTCACCCGGTCCGACGGACGCACCGTTCAAGTGCCATCTCTGCGACAGCGGATTCTCCGAGCGTCAGGACTGCCTCGAACACATCAGGATCAATCACACGAGGTCCTACGAGATACTTGTCGCCAAGGGAGCCCTCGACATGGACATCGAGACTCCCGAGGAACAACAGCTTCCACCGCCGCAGCATCTCAGCGATGGCGAAGAGAAACGCGGCAGATTTCCCGATTACAGCAACAGGAAGGTTGTCTGTGCATTCTGCATGCGTCGTTTCTGGTCGGCGGAGGATCTTCGGCGTCACATGAGGACCCACACAGGCGAGCGACCGTTCTCCTGCGACATATGCTGTCGTCGTTTCACCCTGAAGCACAGTATGCTGCGCCATCGTAAGAAGCACGAGTCCGTCGACTCTACGATGTACGTCGGAACGAGCGGGGACGAGGAGTCCGCGCCCTCGCAGCCTCCGACGATAACGCCCCGGAGTCAGCAACAGCAGGCGTCGATGGTGAGCACGACGAGCGGTGAGTCGAGAATTCAGGAGAGAATCTCCCTCCCGACCGTTGCGTCGGTGGCGACCGGTGACGCCGCACCGAGCGGCCTCATGAGGTTCAATCCCTACGAGAAGCTCACAACTCTAACGGGAAAATTGGCGAACGCCCAGAAAGCGTTTAACTCGAGCGACGGTGCCGACACGGAAAATGACCTCATATCGAATCTCCTTGGTATTCGTGACAAAAGCATAATCGACAAGGTGCTACAAGCATCGGCCGATGACGCGGCGAAACTCCTCGGTGTCAACAGAAATCACGACTGA
Protein Sequence: MVGYHSAPCLTTTVAAAGATATAPAENGPDHRHSNSSETHTDAASSPLAADQQEGAYPCPACPIVLSTSRDLTNHLRGHNSPRSTDYSGEDDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGRLSPRDNSYTDSEASSDSEKPAKRRHVEEYNNNEIAKRSSPDLIDQRASPTFAAKRKCPDFADDVENQRKHKILLGNSRTEIKGGMTETQNVHNCPVCGRLDFPTSALLEAHLERNHPEFPAKCDACNLSFKNHRVLNLHRFMIHYAENSFGNNARNLRNSVVGFHDLTFVDFSSEKFPAIARAVCEQSLHRPASGEIAKFQCCKCLRAFPCRSALDGHELDCGVPNSQARVYGDDQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPEHQIKMNPNVGSSGSSGTPSSEYHQEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPFECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPSEDYTNDGSLERSSPRGIREDVRKSLVYPNERDDYCQQQALYPGMPVETKQDLGSISDDGQLRSMAIPSIHGMSLGHYDKSDIFARTPSVGVHPLELSHRAVDDTDKAHHDLSSKSDFGGKLDYDIDSRSSEDGSVSLVSDTKPDNVHQRAQASPIDLKKNATAPVVVGGGETSTSVTGEDAPLDLSMDVLDLSKKSKGTNNNNNNATETPNNPDELGRNQKEFYDATNQFLLTQALLKAGQAGNPATSLEALYANAHLIYRNFGGFSAAGVGGGILPPYLFNPHMFGQDFAMKDRLQKELVRGLQLTSGGTLVEPPIGNTAFAAAYPQGRDIPAHSMSEQSDYAKLMSSKLPNKMVSPREKMENSQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLHNANHPGGQQLPQAYPSILPKIGQSSSSVGYEKHSISDQVKYAILAQQLKGSKMEENDTEEELVIDEGAHDREAVDHEADGERPTSLLRGKLEGSNLYKDNVARHQHQQLQATELVKKNSTKEETDDDGEDAEDREDYSPVHVKTEPEEDNHEDESKDCTPSELCVTEMSKIEQCSRDGMSERNEDGTADLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSGNSNSSKKKKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKIRRMRNSSSPEAQEVPSNNNSSTFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRGFKSRAESPVTSEPQNSPVPGNKQNDQSGYESQSSSVSDNMDHMERMESMENADANPENPENGKSSEKERNSEEAEDETAKGNETAETTEQQIDNADNVDTMESSSAVDTGAKTNDCTLASTNESSKSRRPSPRSSPGPTDAPFKCHLCDSGFSERQDCLEHIRINHTRSYEILVAKGALDMDIETPEEQQLPPPQHLSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEESAPSQPPTITPRSQQQQASMVSTTSGESRIQERISLPTVASVATGDAAPSGLMRFNPYEKLTTLTGKLANAQKAFNSSDGADTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRNHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00414570;
90% Identity: iTF_00058943;
80% Identity: -