Basic Information

Insect: Amblyjoppa fuscipennis
Gene Symbol: RREB1
Assembly: GCA_963575735.1
Location: OY754488.1:28591278-28597279[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00095 0.086 13.7 0.0 1 23 62 84 62 84 0.98

2 15 0.0002 0.018 15.8 0.3 1 23 98 120 98 120 0.98

3 15 2.6e-07 2.4e-05 24.9 1.3 1 23 126 149 126 149 0.98

4 15 0.067 6.1 7.9 0.1 1 23 243 267 243 267 0.94

5 15 0.38 35 5.5 2.1 2 23 273 295 273 295 0.94

6 15 0.077 7 7.7 0.1 1 23 486 508 486 508 0.96

7 15 3.3e-05 0.003 18.3 0.3 1 23 517 539 517 539 0.98

8 15 0.0021 0.19 12.6 2.9 1 23 545 568 545 568 0.97

9 15 0.00053 0.048 14.5 3.0 1 23 981 1004 981 1004 0.97

10 15 0.00076 0.069 14.0 0.1 3 23 1305 1325 1303 1325 0.97

11 15 1.1 96 4.1 6.5 1 23 1331 1354 1331 1354 0.97

12 15 0.021 1.9 9.5 1.8 1 23 1394 1418 1394 1418 0.95

13 15 0.62 57 4.8 3.1 1 23 1565 1588 1565 1588 0.96

14 15 0.013 1.2 10.1 0.4 2 23 1638 1659 1637 1659 0.94

15 15 1.5 1.4e+02 3.6 8.2 1 23 1665 1687 1665 1687 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00095	0.086	13.7	0.0	1	23	62	84	62	84	0.98
2	15	0.0002	0.018	15.8	0.3	1	23	98	120	98	120	0.98
3	15	2.6e-07	2.4e-05	24.9	1.3	1	23	126	149	126	149	0.98
4	15	0.067	6.1	7.9	0.1	1	23	243	267	243	267	0.94
5	15	0.38	35	5.5	2.1	2	23	273	295	273	295	0.94
6	15	0.077	7	7.7	0.1	1	23	486	508	486	508	0.96
7	15	3.3e-05	0.003	18.3	0.3	1	23	517	539	517	539	0.98
8	15	0.0021	0.19	12.6	2.9	1	23	545	568	545	568	0.97
9	15	0.00053	0.048	14.5	3.0	1	23	981	1004	981	1004	0.97
10	15	0.00076	0.069	14.0	0.1	3	23	1305	1325	1303	1325	0.97
11	15	1.1	96	4.1	6.5	1	23	1331	1354	1331	1354	0.97
12	15	0.021	1.9	9.5	1.8	1	23	1394	1418	1394	1418	0.95
13	15	0.62	57	4.8	3.1	1	23	1565	1588	1565	1588	0.96
14	15	0.013	1.2	10.1	0.4	2	23	1638	1659	1637	1659	0.94
15	15	1.5	1.4e+02	3.6	8.2	1	23	1665	1687	1665	1687	0.98

Sequence Information

Coding Sequence: ATGTGCGCGGATCAGCGGGAACCTTCGAGACAAATAAGATTCCGCCGGGTGACTACGAcagtagcagcagcaggagcaaCAGCTACGGCGCCAGCCGAGAACGGACCGGATCATCGACACAACAGCGAGACACACACAGATGCAGCATCATCGCCATTGgctGCAGATCAACAGGAAGGAGCTTATCCGTGTCCAGCCTGTCCGATAGTTCTCTCGACATCTCGGGACTTGACGAATCATCTCCGAGGTCACAATTCGCCGCGGAGCACCGATTACAGCGGCGAGGACGATTACTCCTGCGGTGTTTGTCACAAAGTTTTGAGCTCGGCGAGCTCGCTGGACCGTCACGTGCTCGTTCACTCCGGGGAGCGTCCGTTCAAGTGCAAGTATTGCGACATGGCGTTCACGACGAACGGCAACATGAATAGACATCTGAGAACCGCTCACGGTCGTCTGTCGCCTCGCGACAACAGTTACACGGACTCCGAGGCGAGCAGCGATTCGGAAAAACCGGCGAAGAGGCGACACGTCGAGGAATACAACAACAACGAGATCGCGAAGAGAAGCTCGCCCGATCTGATCGATCAACGGGCGTCGCCGACATTCGCGGCAAAGCGCAAGTGTCCCGACTTCGCCGACGACATAGAGAATCAGCGAAAGCACAAGATTCTTCTCGGTAACTCGAGAACCGAGATAAAGGGCGGTATGACGGAGACACAGAACGTTCACAACTGTCCCGTCTGCGGTAGATTGGATTTTCCGACGAGCGCCCTTCTCGAGGCCCATCTGGAGCGCAATCATCCGGAGTTTCCGGCGAAGTGCGACGCGTGCAATCTCTCGTTCAAGAATCATCGGGTTCTCAATCTTCACCGATTCATGATACACTACGCGGAGAATTCTTTCGGCAACAACGCGAGAAATCTACGAAACTCCGTTGTCGGCTTTCACGATTTGACTTTCGTGGATTTCTCGTCGGAAAAGTTTCCGGCCATCGCGAGAGCTGTCTGCGAGCAGTCGCTGCATCGTCCGGCCTCGGGTGAGATAGCCAAGTTTCAGTGCTGCAAGTGCCTGAGGGCTTTTCCTTGCCGCTCGGCTCTGGACGGTCACGAGCTGGACTGCGGCGTGCCGAACTCGCAGGCGCGCGTCTACGGCGACGATCAGTCGAGGCGGGACGACTTCTTCGCCGGTCTCGATCTTCAGAACAAGGCCGCCCTCACCGAGGCCAAGGAGGGCAAGGATCTCGCCGACATACAGAGCATAATATCGGTCACCTCAGGACCGATACTGCAAAATTTTCCCCGTTCCGACGCGAGCACACCCGAGCACCAGATAAAGATGAATCCGAACGTCGGCTCGTCGGGCTCGTCGGGAACGCCGTCCTCGGAGTACCATCAGGAGGAGGAGGCGCAGGACGCGTTCGCCGCAGAATTTCGAAAGATGAAGCTCAAAGGCGAATTCCCGTGTCGACTGTGCACAGCTGTGTTTCCGAATCTGCGAGCGCTCAAGGGCCACAATCGGGCTCACATGGGAGTGGGACCTGGAATGCCTTATCCCTGCAACATGTGCCCGTACACGAGCACCGACAAGGCGACTCTGGTGAGACACCTGAGGTCTCACAACGGCGATCGTCCGTTCGAGTGCTCGCTGTGCAACTACGCTTTCACGACAAAGGCCAATTGCGAGAGGCACGTGAGAAACCGTCACGGTAAATTGACCCGGGAGGACATAAAGAGCGTTTTGATTTATCACCCGAGCGAGGACTACACGAACGACGGATCACTCGAGAGAAGTTCACCGCGAGGAATACGGGAGGACGTTCGCAAGAGTCTGGTCTATCCGAACGAGCGCGACGATTACTGTCAGCAGCAGGCGCTCTATCCTGGAATGCCCGTGGAGACCAAGCAGGATCTCGGCAGCATGTCCGACGACGGACAACTCCGCTCGATGGCCATGCCGTCCATCCACGGAATGTCCCTTGGGCACTACGACAAAGCCGATCTGTTCGCGAGAACGCCGAGCGCCGGTGTTCATCCGCTGGAACTGAGCCACAGAGCCGTCGACGACACGGACAAGGCCCATCACGATCTCTCCTCGAAGTCCGATTTCGGTGGTAAGCTCGATTACGACATCGACTCGAGATCATCGGAGGACGGTAGCGTTTCTCTAGTCAGCGATACCAAACCCGATAATGTACACCAAAGAGTTCAAGCTAGTCCGATAGACCTCAAGAAGAACGCGACAGCGccggtcgtcgtcggcggcggAGAAACCTCCACCTCGGTGACCGGCGAGGACGCGCCGCTGGATCTATCGATGGACGTCCTTGATCTTAGCAAGAAATCCAAaggaaacaacaacaacaacaacaacaacgccACGGAAACCCCGAGCATTCCCGATGAGCTTGGCAGAAACCAAAAGGAGTTCTACGACGCGACGAATCAGTTCTTGCTTACCCAGGCGCTTCTCAAGGTTGGACAAGCCGGAAATCCCACCACCTCGCTGGAAGCTCTCTACGCCAACGCGCATCTCATATACAGAAATTTCGGGGGTTTCTCGGCCGCGGGCGTCGGCGGTGGCATCCTGCCGCCTTATCTCTTCAATCCTCACATGTTCGGTCAGGACTTCGCTATGAAGGACCGACTGCAGAAGGAGCTCGTTCGCGGATTGCAATTGACGAGCGGCGGTACCCTCGTCGAACCGCCGATCGGCAATACGGCCTTCGCCGCCGCCTATCCTCAGGGCAGGGACATACCGGCTCACTCGATGAGCGAACAGAGCGACTACGCCAAGCTGATGTCCTCGAAGCTGCCGAACAAGATGGTCAGCCCGCGCGAGAAAATGGACAACTCGCAGTCGTCGAATTCCGTCAAGATGGTGATCAAGAACGGTGTCTTGATGCCGAAGCAGAAACAGCGGAGATACAGAACCGAGAGACCGTTCACATGCGAGCATTGCTCGGCCCGATTCACCCTCAGAAGCAACATGGAGAGACACATCAAGCAACAGCATCCCCAACACTGGAGTCAGAGGCCACGAGGCGGTCACTCGACGAGGGGAAGACCACCGACGAATCCGCCGACTCTGCTGCACAACGCCAATCATCCAGGTGGGCAGCAACTGCCCCAGGCTTATCCCAGCATACTTCCGAAGATCGGACAGTCGTCGAGCTCGGTGGGTTACGAGAAACACTCGATATCCGATCAGGTGAAATACGCGATTCTGGCTCAACAGCTCAAAGGCAGCAAGATGGAGGAGAACGACACCGAGGAGGAATTGGTAATCGACGAGGGCACTCACGACCGGGAGGCCGCCGATCGCGAGGCTGATGGCGAGCGTCCGACGAGCCTCCTGCGAGGTAAACTCGAGGGAAGCAATCTGTACAAAGACAACGTCGCCAGACATCAGCACCAACAGCTCCAGCCCACCGAGTTGGTTAAGAAAAATTCTACGAAAGAGGAGTCCGACGATGACGGCGAGGATGCCGAGGACCACGAAGATTACTCGCCGGTGCACGTGAAGACCGAGCCCGAGGAGGAGAATCACGAGGACGACTCCAAGGACTGCACACCGAGCGAACTTTGCGTGACGGAGATGTCGAAGATCGAGCAATGCTCGCGCGACGGTATGAGCGAGAGAAACGAGGATGGCACGGCAGATCTGGCGAGCGTCTCCGAACTGCTCGACAACGCTTCGCAGCAGTACCAGCAGTTCCAGCCCCAGTACATGAGCGACGAGGAGGGCCTCGTCGCCTCGACGAGCGACTGCAACAACTCCGGTAGCGACGAGAAATCCGATTCTGTTAATTCGGCGAACTCCGCCAATTCTAATtcatcgaagaagaagaagaaaaagaagaagaagaagaagaagaagaagtccGCATACTCGATGGCGCCGAACAGAGTCATATGTCCTTACTGCGAGAGACCCTTCCCCTGGACGTCCTCGCTGAGACGGCACATCCTCACACACACCGGACAGAAGCCCTACCAGTGCATGCACTGCTCACTCCTCTTCACGACGAAATCCAACTGCGATCGTCACCTGCTCagaaaacacaaaaacaaCGCGAACAAGATACGCCGAATGAGAAACTCATCGTCGCCCGAAGCACAAGAGGTACCGtccaacaacaacagcagcaccTTCGCGATGAGAAACGTTCCCGAGAGACCGTACAAATGCAATCTGTGCCCAAGCTCGACTTTCTCGACGCTCGGCAATCTCAAGAAGCACAAATCGTCGAAACACTCCAGAGGTTTCAAATCGCGAGCCGAATCACCGGTTACCAGCGAGCCGCAGAACAGTCCCGTACCGGGCAACAAGCAGAACGATCAGAGCGGCTACGAGAGCCAGTCGTCGAGCGTTTCCGACAATATGGATCACGTGGAGCGAATGGAGAGCGTCGAGCACGCCGAGGCGAATCCGGGGAACGCGGAGAACGGAAAGAGCTCCGAGAAGGAGAGAAACCCTGAGGAAGCGGACGACCACGAGACTGCGAAGGGCAACGAGACCGCCGAGACGACCGAACAGCAGATCGACAACGCCGAGAGCGTCGATACCATTGAAAGCTCATCGGCCGCGGATGCCGGAGCGAAGACCAACGACTGCACCACTGCGTCGACGAACGAATCGTCGAAATCGCGAAGACCGTCACCGCGCTCCTCACCCGGTCCGACCGACGCACCGTTCAAGTGCCATCTATGCGACAGCGGATTCTCCGAGCGTCAGGACTGCCTCGAACACATCAGGATCAATCACACGAGGTCCTACGAGATTCTGGTCGCCAAGGGAGCCCTCGACATGGACATCGAGACTCCCGAGGAACAACAACTTCCACCGCCACAACATCTAAGCGATGGCGAAGAGAAACGCGGCAGATTTCCCGATTACAGCAACAGGAAGGTTGTCTGTGCATTCTGCATGCGCCGTTTCTGGTCGGCGGAGGATCTTCGGCGTCACATGAGGACCCACACGGGCGAGCGGCCGTTCTCCTGCGACATATGCTGTCGTCGTTTCACGCTGAAGCACAGTATGCTCCGTCATCGTAAGAAGCACGAGTCCGTCGACTCGACGATGTACGTCGGAACGAGCGGCGACGAGGAGTCTGCGCCCTCGCAGCCTCCGACGATAACGCCCCGGAGTCAGCAACAGCAGGCGTCGATGGTGAGCACGACGAGCGGTGAGTCGAGAATTCAGGAGAGGATCTCCCTCCCGACAGTGGCGTCGGTGGCGACCGGTGACGCCGCACCGAGCGGCCTCATGAGGTTCAATCCCTATGAGAAACTCACAACTCTAACGGGAAAATTGGCAAACGCCCAGAAAGCGTTTAACTCGAGCGACGGTGCCGACACGGAAAATGACCTGATATCGAATCTCCTTGGTATTCGTGATAAAAGCATAATCGACAAGGTGCTCCAAGCGTCGGCCGATGACGCGGCGAAACTCCTCGGTGTCAACAGAAATCACGACTGA
Protein Sequence: MCADQREPSRQIRFRRVTTTVAAAGATATAPAENGPDHRHNSETHTDAASSPLAADQQEGAYPCPACPIVLSTSRDLTNHLRGHNSPRSTDYSGEDDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGRLSPRDNSYTDSEASSDSEKPAKRRHVEEYNNNEIAKRSSPDLIDQRASPTFAAKRKCPDFADDIENQRKHKILLGNSRTEIKGGMTETQNVHNCPVCGRLDFPTSALLEAHLERNHPEFPAKCDACNLSFKNHRVLNLHRFMIHYAENSFGNNARNLRNSVVGFHDLTFVDFSSEKFPAIARAVCEQSLHRPASGEIAKFQCCKCLRAFPCRSALDGHELDCGVPNSQARVYGDDQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPEHQIKMNPNVGSSGSSGTPSSEYHQEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPFECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPSEDYTNDGSLERSSPRGIREDVRKSLVYPNERDDYCQQQALYPGMPVETKQDLGSMSDDGQLRSMAMPSIHGMSLGHYDKADLFARTPSAGVHPLELSHRAVDDTDKAHHDLSSKSDFGGKLDYDIDSRSSEDGSVSLVSDTKPDNVHQRVQASPIDLKKNATAPVVVGGGETSTSVTGEDAPLDLSMDVLDLSKKSKGNNNNNNNNATETPSIPDELGRNQKEFYDATNQFLLTQALLKVGQAGNPTTSLEALYANAHLIYRNFGGFSAAGVGGGILPPYLFNPHMFGQDFAMKDRLQKELVRGLQLTSGGTLVEPPIGNTAFAAAYPQGRDIPAHSMSEQSDYAKLMSSKLPNKMVSPREKMDNSQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNPPTLLHNANHPGGQQLPQAYPSILPKIGQSSSSVGYEKHSISDQVKYAILAQQLKGSKMEENDTEEELVIDEGTHDREAADREADGERPTSLLRGKLEGSNLYKDNVARHQHQQLQPTELVKKNSTKEESDDDGEDAEDHEDYSPVHVKTEPEEENHEDDSKDCTPSELCVTEMSKIEQCSRDGMSERNEDGTADLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSANSNSSKKKKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKIRRMRNSSSPEAQEVPSNNNSSTFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRGFKSRAESPVTSEPQNSPVPGNKQNDQSGYESQSSSVSDNMDHVERMESVEHAEANPGNAENGKSSEKERNPEEADDHETAKGNETAETTEQQIDNAESVDTIESSSAADAGAKTNDCTTASTNESSKSRRPSPRSSPGPTDAPFKCHLCDSGFSERQDCLEHIRINHTRSYEILVAKGALDMDIETPEEQQLPPPQHLSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEESAPSQPPTITPRSQQQQASMVSTTSGESRIQERISLPTVASVATGDAAPSGLMRFNPYEKLTTLTGKLANAQKAFNSSDGADTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRNHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00414570;
90% Identity: iTF_00058943;
80% Identity: -